RNA–Protein interactions for RNA: ENST00000586963.1

CAPNS1-203, Transcript of calpain small subunit 1, humanhuman

TSL 2

Gene CAPNS1, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-203ENST00000586963 SNX17Q15036 470 aa9.65□□□□□ -0.86
CAPNS1-203ENST00000586963 LRRC41Q15345 812 aa9.65□□□□□ -0.86
CAPNS1-203ENST00000586963 PRAMEF19Q5SWL8 479 aa9.65□□□□□ -0.86
CAPNS1-203ENST00000586963 CTR9Q6PD62 1173 aa9.65□□□□□ -0.86
CAPNS1-203ENST00000586963 RIOX2Q8IUF8 465 aa9.65□□□□□ -0.86
CAPNS1-203ENST00000586963 CLEC10AQ8IUN9 316 aa9.65□□□□□ -0.86
CAPNS1-203ENST00000586963 GOPCQ9HD26 462 aa9.65□□□□□ -0.86
CAPNS1-203ENST00000586963 ATP11BQ9Y2G3 1177 aa9.65□□□□□ -0.86
CAPNS1-203ENST00000586963 SLC4A4Q9Y6R1 1079 aa9.65□□□□□ -0.86
CAPNS1-203ENST00000586963 ZNF236Q9UL36 1845 aa9.65□□□□□ -0.86
CAPNS1-203ENST00000586963 UNC80Q8N2C7 3258 aa9.65□□□□□ -0.87
CAPNS1-203ENST00000586963 SMIM22K7EJ46 135 aa9.64□□□□□ -0.87
CAPNS1-203ENST00000586963 VWA5AO00534 786 aa9.64□□□□□ -0.87
CAPNS1-203ENST00000586963 STAT3P40763 770 aa9.64□□□□□ -0.87
CAPNS1-203ENST00000586963 ADCYAP1R1P41586 468 aa9.64□□□□□ -0.87
CAPNS1-203ENST00000586963 SBK1Q52WX2 424 aa9.64□□□□□ -0.87
CAPNS1-203ENST00000586963 ANO1Q5XXA6 986 aa9.64□□□□□ -0.87
CAPNS1-203ENST00000586963 GIMAP6Q6P9H5 292 aa9.64□□□□□ -0.87
CAPNS1-203ENST00000586963 MMP19Q99542 508 aa9.64□□□□□ -0.87
CAPNS1-203ENST00000586963 TINF2Q9BSI4 451 aa9.64□□□□□ -0.87
CAPNS1-203ENST00000586963 LRRCC1Q9C099 1032 aa9.64□□□□□ -0.87
CAPNS1-203ENST00000586963 PUS7LQ9H0K6 701 aaKnown RBP9.64□□□□□ -0.87
CAPNS1-203ENST00000586963 BCL11AQ9H165 835 aa9.64□□□□□ -0.87
CAPNS1-203ENST00000586963 FBXO28Q9NVF7 368 aa9.64□□□□□ -0.87
CAPNS1-203ENST00000586963 PPP1R9AQ9ULJ8 1098 aa9.64□□□□□ -0.87
CAPNS1-203ENST00000586963 RLFQ13129 1914 aa9.64□□□□□ -0.87
CAPNS1-203ENST00000586963 NAV1Q8NEY1 1877 aa9.64□□□□□ -0.87
CAPNS1-203ENST00000586963 CHGBP05060 677 aa9.63□□□□□ -0.87
CAPNS1-203ENST00000586963 RARBP10826 455 aa9.63□□□□□ -0.87
CAPNS1-203ENST00000586963 KCTD2Q14681 263 aa9.63□□□□□ -0.87
CAPNS1-203ENST00000586963 ZNF792Q3KQV3 632 aa9.63□□□□□ -0.87
CAPNS1-203ENST00000586963 TRIM60Q495X7 471 aa9.63□□□□□ -0.87
CAPNS1-203ENST00000586963 FAM47AQ5JRC9 791 aa9.63□□□□□ -0.87
CAPNS1-203ENST00000586963 SAMD1Q6SPF0 538 aaPredicted RBP9.63□□□□□ -0.87
CAPNS1-203ENST00000586963 RNF180Q86T96 592 aa9.63□□□□□ -0.87
CAPNS1-203ENST00000586963 MSL3Q8N5Y2 521 aaKnown RBP9.63□□□□□ -0.87
CAPNS1-203ENST00000586963 REPS2Q8NFH8 660 aa9.63□□□□□ -0.87
CAPNS1-203ENST00000586963 STRBPQ96SI9 672 aaKnown RBP9.63□□□□□ -0.87
CAPNS1-203ENST00000586963 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.63□□□□□ -0.87
CAPNS1-203ENST00000586963 NYAP2Q9P242 653 aa9.63□□□□□ -0.87
CAPNS1-203ENST00000586963 ARPP21Q9UBL0 812 aaPredicted RBP9.63□□□□□ -0.87
CAPNS1-203ENST00000586963 ZNF214Q9UL59 606 aaPredicted RBP9.63□□□□□ -0.87
CAPNS1-203ENST00000586963 PHF24Q9UPV7 400 aa9.63□□□□□ -0.87
CAPNS1-203ENST00000586963 CUL9Q8IWT3 2517 aa9.62□□□□□ -0.87
CAPNS1-203ENST00000586963 A0A0G2JMZ2 1700 aa9.62□□□□□ -0.87
CAPNS1-203ENST00000586963 MYCNP04198 464 aaPredicted RBP9.62□□□□□ -0.87
CAPNS1-203ENST00000586963 SHHQ15465 462 aa9.62□□□□□ -0.87
CAPNS1-203ENST00000586963 FAM83BQ5T0W9 1011 aa9.62□□□□□ -0.87
CAPNS1-203ENST00000586963 FERMT2Q96AC1 680 aa9.62□□□□□ -0.87
CAPNS1-203ENST00000586963 XPNPEP3Q9NQH7 507 aa9.62□□□□□ -0.87
CAPNS1-203ENST00000586963 PDLIM7Q9NR12 457 aa9.62□□□□□ -0.87
CAPNS1-203ENST00000586963 ECHDC1Q9NTX5 307 aa9.62□□□□□ -0.87
CAPNS1-203ENST00000586963 RCAN3Q9UKA8 241 aa9.62□□□□□ -0.87
CAPNS1-203ENST00000586963 TACC3Q9Y6A5 838 aa9.62□□□□□ -0.87
CAPNS1-203ENST00000586963 ROBO3Q96MS0 1386 aa9.62□□□□□ -0.87
CAPNS1-203ENST00000586963 FRMPD3Q5JV73 1810 aa9.61□□□□□ -0.87
CAPNS1-203ENST00000586963 TRIM43BA6NCK2 446 aa9.61□□□□□ -0.87
CAPNS1-203ENST00000586963 GSG1L2A8MUP6 293 aa9.61□□□□□ -0.87
CAPNS1-203ENST00000586963 F5H6K3 240 aa9.61□□□□□ -0.87
CAPNS1-203ENST00000586963 ATP2A1O14983 1001 aa9.61□□□□□ -0.87
CAPNS1-203ENST00000586963 PGK2P07205 417 aa9.61□□□□□ -0.87
CAPNS1-203ENST00000586963 ZNF865P0CJ78 1059 aaPredicted RBP9.61□□□□□ -0.87
CAPNS1-203ENST00000586963 AKR1A1P14550 325 aa9.61□□□□□ -0.87
CAPNS1-203ENST00000586963 RASA1P20936 1047 aa9.61□□□□□ -0.87
CAPNS1-203ENST00000586963 SMAD3P84022 425 aaKnown RBP9.61□□□□□ -0.87
CAPNS1-203ENST00000586963 TLE2Q04725 743 aa9.61□□□□□ -0.87
CAPNS1-203ENST00000586963 KLRC3Q07444 240 aa9.61□□□□□ -0.87
CAPNS1-203ENST00000586963 ZNF697Q5TEC3 545 aa9.61□□□□□ -0.87
CAPNS1-203ENST00000586963 SH3RF1Q7Z6J0 888 aa9.61□□□□□ -0.87
CAPNS1-203ENST00000586963 KBTBD3Q8NAB2 608 aa9.61□□□□□ -0.87
CAPNS1-203ENST00000586963 PRPF38AQ8NAV1 312 aaKnown RBP9.61□□□□□ -0.87
CAPNS1-203ENST00000586963 BADQ92934 168 aa9.61□□□□□ -0.87
CAPNS1-203ENST00000586963 TRIM43Q96BQ3 446 aaPredicted RBP9.61□□□□□ -0.87
CAPNS1-203ENST00000586963 GUCD1Q96NT3 240 aa9.61□□□□□ -0.87
CAPNS1-203ENST00000586963 SLF1Q9BQI6 1058 aa9.61□□□□□ -0.87
CAPNS1-203ENST00000586963 TSEN34Q9BSV6 310 aaKnown RBP9.61□□□□□ -0.87
CAPNS1-203ENST00000586963 TEX13BQ9BXU2 312 aa9.61□□□□□ -0.87
CAPNS1-203ENST00000586963 MKNK2Q9HBH9 465 aa9.61□□□□□ -0.87
CAPNS1-203ENST00000586963 PRDM5Q9NQX1 630 aaPredicted RBP9.61□□□□□ -0.87
CAPNS1-203ENST00000586963 SYNPO2Q9UMS6 1093 aa9.61□□□□□ -0.87
CAPNS1-203ENST00000586963 SYNGAP1Q96PV0 1343 aa9.6□□□□□ -0.87
CAPNS1-203ENST00000586963 DNAJC25-GNG10A0A024R161 153 aa9.6□□□□□ -0.87
CAPNS1-203ENST00000586963 IGKV6D-41A0A0C4DH26 115 aa9.6□□□□□ -0.87
CAPNS1-203ENST00000586963 KIAA0355O15063 1070 aa9.6□□□□□ -0.87
CAPNS1-203ENST00000586963 RAD21O60216 631 aa9.6□□□□□ -0.87
CAPNS1-203ENST00000586963 SMARCA5O60264 1052 aaPredicted RBP9.6□□□□□ -0.87
CAPNS1-203ENST00000586963 PGK1P00558 417 aa9.6□□□□□ -0.87
CAPNS1-203ENST00000586963 ZFYP08048 801 aaPredicted RBP9.6□□□□□ -0.87
CAPNS1-203ENST00000586963 TAL1P17542 331 aaPredicted RBP9.6□□□□□ -0.87
CAPNS1-203ENST00000586963 GNAT2P19087 354 aa9.6□□□□□ -0.87
CAPNS1-203ENST00000586963 C9orf50Q5SZB4 431 aa9.6□□□□□ -0.87
CAPNS1-203ENST00000586963 MAMDC4Q6UXC1 1216 aa9.6□□□□□ -0.87
CAPNS1-203ENST00000586963 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.6□□□□□ -0.87
CAPNS1-203ENST00000586963 ZNF467Q7Z7K2 595 aaPredicted RBP9.6□□□□□ -0.87
CAPNS1-203ENST00000586963 APPBP2Q92624 585 aa9.6□□□□□ -0.87
CAPNS1-203ENST00000586963 OSBP2Q969R2 916 aa9.6□□□□□ -0.87
CAPNS1-203ENST00000586963 MKL1Q969V6 931 aa9.6□□□□□ -0.87
CAPNS1-203ENST00000586963 GPATCH3Q96I76 525 aa9.6□□□□□ -0.87
CAPNS1-203ENST00000586963 TOX2Q96NM4 488 aa9.6□□□□□ -0.87
CAPNS1-203ENST00000586963 SEMA6BQ9H3T3 888 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms