RNA–Protein interactions for RNA: ENST00000586538.1

ACTN4-209, Transcript of actinin alpha 4, humanhuman

TSL 5

Gene ACTN4, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-209ENST00000586538 TTLL1O95922 423 aa13.38□□□□□ -0.27
ACTN4-209ENST00000586538 CHGBP05060 677 aa13.38□□□□□ -0.27
ACTN4-209ENST00000586538 FDX1P10109 184 aa13.38□□□□□ -0.27
ACTN4-209ENST00000586538 CNGA1P29973 690 aa13.38□□□□□ -0.27
ACTN4-209ENST00000586538 KCTD2Q14681 263 aa13.38□□□□□ -0.27
ACTN4-209ENST00000586538 CCL14Q16627 93 aa13.38□□□□□ -0.27
ACTN4-209ENST00000586538 POTEEQ6S8J3 1075 aa13.38□□□□□ -0.27
ACTN4-209ENST00000586538 SAMD1Q6SPF0 538 aaPredicted RBP13.38□□□□□ -0.27
ACTN4-209ENST00000586538 CHRDL2Q6WN34 429 aa13.38□□□□□ -0.27
ACTN4-209ENST00000586538 RIOX2Q8IUF8 465 aa13.38□□□□□ -0.27
ACTN4-209ENST00000586538 CLEC10AQ8IUN9 316 aa13.38□□□□□ -0.27
ACTN4-209ENST00000586538 SIAH1Q8IUQ4 282 aa13.38□□□□□ -0.27
ACTN4-209ENST00000586538 SLF1Q9BQI6 1058 aa13.38□□□□□ -0.27
ACTN4-209ENST00000586538 DDX20Q9UHI6 824 aaKnown RBP13.38□□□□□ -0.27
ACTN4-209ENST00000586538 NRBP1Q9UHY1 535 aa13.38□□□□□ -0.27
ACTN4-209ENST00000586538 ADAMTS5Q9UNA0 930 aa13.38□□□□□ -0.27
ACTN4-209ENST00000586538 RLFQ13129 1914 aa13.37□□□□□ -0.27
ACTN4-209ENST00000586538 PARP14Q460N5 1801 aa13.37□□□□□ -0.27
ACTN4-209ENST00000586538 VWA5AO00534 786 aa13.37□□□□□ -0.27
ACTN4-209ENST00000586538 STAT3P40763 770 aa13.37□□□□□ -0.27
ACTN4-209ENST00000586538 MFAP1P55081 439 aaKnown RBP13.37□□□□□ -0.27
ACTN4-209ENST00000586538 PPARAQ07869 468 aa13.37□□□□□ -0.27
ACTN4-209ENST00000586538 FAM83BQ5T0W9 1011 aa13.37□□□□□ -0.27
ACTN4-209ENST00000586538 PRPF38AQ8NAV1 312 aaKnown RBP13.37□□□□□ -0.27
ACTN4-209ENST00000586538 YTHDC1Q96MU7 727 aaKnown RBP13.37□□□□□ -0.27
ACTN4-209ENST00000586538 MMP19Q99542 508 aa13.37□□□□□ -0.27
ACTN4-209ENST00000586538 TEX13BQ9BXU2 312 aa13.37□□□□□ -0.27
ACTN4-209ENST00000586538 EPB41L4AQ9HCS5 686 aaPredicted RBP13.37□□□□□ -0.27
ACTN4-209ENST00000586538 HELLSQ9NRZ9 838 aa13.37□□□□□ -0.27
ACTN4-209ENST00000586538 STAP2Q9UGK3 403 aa13.37□□□□□ -0.27
ACTN4-209ENST00000586538 DIS3Q9Y2L1 958 aaKnown RBP13.37□□□□□ -0.27
ACTN4-209ENST00000586538 F5H6K3 240 aa13.36□□□□□ -0.27
ACTN4-209ENST00000586538 ZBED4O75132 1171 aa13.36□□□□□ -0.27
ACTN4-209ENST00000586538 CCND3P30281 292 aaPredicted RBP13.36□□□□□ -0.27
ACTN4-209ENST00000586538 KLRC3Q07444 240 aa13.36□□□□□ -0.27
ACTN4-209ENST00000586538 TMEM132BQ14DG7 1078 aa13.36□□□□□ -0.27
ACTN4-209ENST00000586538 MSL3Q8N5Y2 521 aaKnown RBP13.36□□□□□ -0.27
ACTN4-209ENST00000586538 ARRDC4Q8NCT1 418 aa13.36□□□□□ -0.27
ACTN4-209ENST00000586538 GMCL1P1Q8NEA9 526 aa13.36□□□□□ -0.27
ACTN4-209ENST00000586538 DIS3LQ8TF46 1054 aaKnown RBP13.36□□□□□ -0.27
ACTN4-209ENST00000586538 MKL1Q969V6 931 aa13.36□□□□□ -0.27
ACTN4-209ENST00000586538 MTMR4Q9NYA4 1195 aa13.36□□□□□ -0.27
ACTN4-209ENST00000586538 CLIP2Q9UDT6 1046 aa13.36□□□□□ -0.27
ACTN4-209ENST00000586538 FBXO40Q9UH90 709 aa13.36□□□□□ -0.27
ACTN4-209ENST00000586538 FEM1BQ9UK73 627 aa13.36□□□□□ -0.27
ACTN4-209ENST00000586538 SALL3Q9BXA9 1300 aa13.36□□□□□ -0.27
ACTN4-209ENST00000586538 MYH4Q9Y623 1939 aa13.35□□□□□ -0.27
ACTN4-209ENST00000586538 TSPY2A6NKD2 308 aa13.35□□□□□ -0.27
ACTN4-209ENST00000586538 KBTBD13C9JR72 458 aa13.35□□□□□ -0.27
ACTN4-209ENST00000586538 DNM1LO00429 736 aa13.35□□□□□ -0.27
ACTN4-209ENST00000586538 SEPT4O43236 478 aa13.35□□□□□ -0.27
ACTN4-209ENST00000586538 CYBAP13498 195 aa13.35□□□□□ -0.27
ACTN4-209ENST00000586538 NT5C2P49902 561 aa13.35□□□□□ -0.27
ACTN4-209ENST00000586538 OAZ1P54368 228 aa13.35□□□□□ -0.27
ACTN4-209ENST00000586538 PDE1AP54750 535 aa13.35□□□□□ -0.27
ACTN4-209ENST00000586538 KIAA1755Q5JYT7 1200 aa13.35□□□□□ -0.27
ACTN4-209ENST00000586538 LHX8Q68G74 356 aa13.35□□□□□ -0.27
ACTN4-209ENST00000586538 C7orf61Q8IZ16 206 aa13.35□□□□□ -0.27
ACTN4-209ENST00000586538 STK11IPQ8N1F8 1099 aa13.35□□□□□ -0.27
ACTN4-209ENST00000586538 NEDD1Q8NHV4 660 aa13.35□□□□□ -0.27
ACTN4-209ENST00000586538 NPLOC4Q8TAT6 608 aa13.35□□□□□ -0.27
ACTN4-209ENST00000586538 CEP95Q96GE4 821 aa13.35□□□□□ -0.27
ACTN4-209ENST00000586538 FRMPD3Q5JV73 1810 aa13.34□□□□□ -0.27
ACTN4-209ENST00000586538 CEP290O15078 2479 aa13.34□□□□□ -0.27
ACTN4-209ENST00000586538 IGKV6D-41A0A0C4DH26 115 aa13.34□□□□□ -0.27
ACTN4-209ENST00000586538 ATP2A1O14983 1001 aa13.34□□□□□ -0.27
ACTN4-209ENST00000586538 NDUFB10O96000 172 aa13.34□□□□□ -0.27
ACTN4-209ENST00000586538 PCP11498 1178 aaKnown RBP13.34□□□□□ -0.27
ACTN4-209ENST00000586538 COL6A1P12109 1028 aa13.34□□□□□ -0.27
ACTN4-209ENST00000586538 CYP2C19P33261 490 aa13.34□□□□□ -0.27
ACTN4-209ENST00000586538 FXR1P51114 621 aaKnown RBP eCLIP13.34□□□□□ -0.278e-8■■■■□ 20.4
ACTN4-209ENST00000586538 MCMDC2Q4G0Z9 681 aa13.34□□□□□ -0.27
ACTN4-209ENST00000586538 SNRNP48Q6IEG0 339 aaKnown RBP13.34□□□□□ -0.27
ACTN4-209ENST00000586538 FAM160B2Q86V87 743 aa13.34□□□□□ -0.27
ACTN4-209ENST00000586538 OTUD7AQ8TE49 926 aaPredicted RBP13.34□□□□□ -0.27
ACTN4-209ENST00000586538 CHURC1Q8WUH1 139 aa13.34□□□□□ -0.27
ACTN4-209ENST00000586538 MAML3Q96JK9 1138 aa13.34□□□□□ -0.27
ACTN4-209ENST00000586538 SEC62Q99442 399 aaKnown RBP13.34□□□□□ -0.27
ACTN4-209ENST00000586538 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.34□□□□□ -0.27
ACTN4-209ENST00000586538 FLRT1Q9NZU1 646 aa13.34□□□□□ -0.27
ACTN4-209ENST00000586538 CNPY2Q9Y2B0 182 aa13.34□□□□□ -0.27
ACTN4-209ENST00000586538 ZMYM6O95789 1325 aa13.34□□□□□ -0.27
ACTN4-209ENST00000586538 COL11A1P12107 1806 aaPredicted RBP13.34□□□□□ -0.27
ACTN4-209ENST00000586538 TRIM6-TRIM34B2RNG4 842 aa13.33□□□□□ -0.28
ACTN4-209ENST00000586538 HIP1O00291 1037 aa13.33□□□□□ -0.28
ACTN4-209ENST00000586538 PRDM1O75626 825 aa13.33□□□□□ -0.28
ACTN4-209ENST00000586538 STAT2P52630 851 aa13.33□□□□□ -0.28
ACTN4-209ENST00000586538 TFAP4Q01664 338 aa13.33□□□□□ -0.28
ACTN4-209ENST00000586538 DDX11Q96FC9 970 aa13.33□□□□□ -0.28
ACTN4-209ENST00000586538 FBXO28Q9NVF7 368 aa13.33□□□□□ -0.28
ACTN4-209ENST00000586538 RBM27Q9P2N5 1060 aaKnown RBP13.33□□□□□ -0.28
ACTN4-209ENST00000586538 PRKAG2Q9UGJ0 569 aa13.33□□□□□ -0.28
ACTN4-209ENST00000586538 ANAPC4Q9UJX5 808 aa13.33□□□□□ -0.28
ACTN4-209ENST00000586538 ZNF214Q9UL59 606 aaPredicted RBP13.33□□□□□ -0.28
ACTN4-209ENST00000586538 ISY1Q9ULR0 285 aaKnown RBP13.33□□□□□ -0.28
ACTN4-209ENST00000586538 SMIM22K7EJ46 135 aa13.32□□□□□ -0.28
ACTN4-209ENST00000586538 COBLO75128 1261 aa13.32□□□□□ -0.28
ACTN4-209ENST00000586538 IGHA2P01877 340 aa13.32□□□□□ -0.28
ACTN4-209ENST00000586538 RARBP10826 455 aa13.32□□□□□ -0.28
ACTN4-209ENST00000586538 BMP3P12645 472 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms