RNA–Protein interactions for RNA: ENST00000586477.1

ATG4D-205, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 628 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-205ENST00000586477 TOMM22Q9NS69 142 aa18.97■□□□□ 0.63
ATG4D-205ENST00000586477 SPDYE16A6NNV3 312 aaPredicted RBP18.96■□□□□ 0.63
ATG4D-205ENST00000586477 RBM25P49756 843 aaKnown RBP18.96■□□□□ 0.63
ATG4D-205ENST00000586477 CTDSPL2Q05D32 466 aa18.96■□□□□ 0.63
ATG4D-205ENST00000586477 LBX2Q6XYB7 198 aa18.96■□□□□ 0.63
ATG4D-205ENST00000586477 STK11IPQ8N1F8 1099 aa18.96■□□□□ 0.63
ATG4D-205ENST00000586477 SLAIN1Q8ND83 568 aa18.96■□□□□ 0.63
ATG4D-205ENST00000586477 GPRC5AQ8NFJ5 357 aa18.96■□□□□ 0.63
ATG4D-205ENST00000586477 COA7Q96BR5 231 aa18.96■□□□□ 0.63
ATG4D-205ENST00000586477 BTBD7Q9P203 1132 aa18.96■□□□□ 0.63
ATG4D-205ENST00000586477 TMX2Q9Y320 296 aa18.96■□□□□ 0.63
ATG4D-205ENST00000586477 ICA1Q05084 483 aa18.95■□□□□ 0.62
ATG4D-205ENST00000586477 PXYLP1Q8TE99 480 aa18.95■□□□□ 0.62
ATG4D-205ENST00000586477 PAGR1Q9BTK6 254 aa18.95■□□□□ 0.62
ATG4D-205ENST00000586477 E7EWF7 191 aa18.94■□□□□ 0.62
ATG4D-205ENST00000586477 CCL5P13501 91 aa18.94■□□□□ 0.62
ATG4D-205ENST00000586477 EEF2P13639 858 aaKnown RBP18.94■□□□□ 0.62
ATG4D-205ENST00000586477 CCDC178Q5BJE1 867 aa18.94■□□□□ 0.62
ATG4D-205ENST00000586477 TBC1D10CQ8IV04 446 aa18.94■□□□□ 0.62
ATG4D-205ENST00000586477 USP6NLQ92738 828 aa18.94■□□□□ 0.62
ATG4D-205ENST00000586477 UNC93B1Q9H1C4 597 aa18.94■□□□□ 0.62
ATG4D-205ENST00000586477 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.94■□□□□ 0.62
ATG4D-205ENST00000586477 RABGAP1Q9Y3P9 1069 aa18.94■□□□□ 0.62
ATG4D-205ENST00000586477 MYH4Q9Y623 1939 aa18.94■□□□□ 0.62
ATG4D-205ENST00000586477 COL11A1P12107 1806 aaPredicted RBP18.93■□□□□ 0.62
ATG4D-205ENST00000586477 IGKV6D-41A0A0C4DH26 115 aa18.93■□□□□ 0.62
ATG4D-205ENST00000586477 TSPY2A6NKD2 308 aa18.93■□□□□ 0.62
ATG4D-205ENST00000586477 INHAP05111 366 aa18.93■□□□□ 0.62
ATG4D-205ENST00000586477 SART3Q15020 963 aaKnown RBP18.93■□□□□ 0.62
ATG4D-205ENST00000586477 IQCA1Q86XH1 822 aa18.93■□□□□ 0.62
ATG4D-205ENST00000586477 GTF3C2Q8WUA4 911 aaPredicted RBP18.93■□□□□ 0.62
ATG4D-205ENST00000586477 IL17RAQ96F46 866 aa18.93■□□□□ 0.62
ATG4D-205ENST00000586477 NEK1Q96PY6 1258 aa18.93■□□□□ 0.62
ATG4D-205ENST00000586477 MTA3Q9BTC8 594 aa18.93■□□□□ 0.62
ATG4D-205ENST00000586477 TM6SF1Q9BZW5 370 aa18.93■□□□□ 0.62
ATG4D-205ENST00000586477 VCPKMTQ9H867 229 aa18.93■□□□□ 0.62
ATG4D-205ENST00000586477 SNX14Q9Y5W7 946 aa18.93■□□□□ 0.62
ATG4D-205ENST00000586477 TACC3Q9Y6A5 838 aa18.93■□□□□ 0.62
ATG4D-205ENST00000586477 RANBP6O60518 1105 aaKnown RBP18.92■□□□□ 0.62
ATG4D-205ENST00000586477 TSPY3P0CV98 308 aa18.92■□□□□ 0.62
ATG4D-205ENST00000586477 TSPY8P0CW00 308 aa18.92■□□□□ 0.62
ATG4D-205ENST00000586477 MCM5P33992 734 aa18.92■□□□□ 0.62
ATG4D-205ENST00000586477 TRIM32Q13049 653 aa18.92■□□□□ 0.62
ATG4D-205ENST00000586477 RRP12Q5JTH9 1297 aaKnown RBP18.92■□□□□ 0.62
ATG4D-205ENST00000586477 MORN1Q5T089 497 aa18.92■□□□□ 0.62
ATG4D-205ENST00000586477 SPICE1Q8N0Z3 855 aa18.92■□□□□ 0.62
ATG4D-205ENST00000586477 TBC1D32Q96NH3 1257 aa18.92■□□□□ 0.62
ATG4D-205ENST00000586477 NBPF3Q9H094 633 aa18.92■□□□□ 0.62
ATG4D-205ENST00000586477 KANSL2Q9H9L4 492 aa18.92■□□□□ 0.62
ATG4D-205ENST00000586477 ARHGEF10LQ9HCE6 1279 aa18.92■□□□□ 0.62
ATG4D-205ENST00000586477 WDR19Q8NEZ3 1342 aa18.92■□□□□ 0.62
ATG4D-205ENST00000586477 PRDM1O75626 825 aa18.91■□□□□ 0.62
ATG4D-205ENST00000586477 BLOC1S2Q6QNY1 142 aa18.91■□□□□ 0.62
ATG4D-205ENST00000586477 GPR142Q7Z601 462 aa18.91■□□□□ 0.62
ATG4D-205ENST00000586477 JAKMIP1Q96N16 626 aaKnown RBP18.91■□□□□ 0.62
ATG4D-205ENST00000586477 BIN2Q9UBW5 565 aaPredicted RBP18.91■□□□□ 0.62
ATG4D-205ENST00000586477 PLIN4Q96Q06 1357 aa18.91■□□□□ 0.62
ATG4D-205ENST00000586477 CEP290O15078 2479 aa18.9■□□□□ 0.62
ATG4D-205ENST00000586477 ERICH2A1L162 156 aa18.9■□□□□ 0.62
ATG4D-205ENST00000586477 GJB1P08034 283 aa18.9■□□□□ 0.62
ATG4D-205ENST00000586477 MAPK4P31152 587 aa18.9■□□□□ 0.62
ATG4D-205ENST00000586477 UBXN2AP68543 259 aa18.9■□□□□ 0.62
ATG4D-205ENST00000586477 COG2Q14746 738 aa18.9■□□□□ 0.62
ATG4D-205ENST00000586477 RASEFQ8IZ41 740 aa18.9■□□□□ 0.62
ATG4D-205ENST00000586477 TRIB2Q92519 343 aa18.9■□□□□ 0.62
ATG4D-205ENST00000586477 LPAR1Q92633 364 aa18.9■□□□□ 0.62
ATG4D-205ENST00000586477 UBAC1Q9BSL1 405 aa18.9■□□□□ 0.62
ATG4D-205ENST00000586477 TANGO6Q9C0B7 1094 aa18.9■□□□□ 0.62
ATG4D-205ENST00000586477 RNF208Q9H0X6 261 aa18.9■□□□□ 0.62
ATG4D-205ENST00000586477 CYP46A1Q9Y6A2 500 aa18.9■□□□□ 0.62
ATG4D-205ENST00000586477 NEDD4P46934 1319 aa18.9■□□□□ 0.62
ATG4D-205ENST00000586477 B4E1Z4 1266 aa18.89■□□□□ 0.61
ATG4D-205ENST00000586477 KDM4AO75164 1064 aa18.89■□□□□ 0.61
ATG4D-205ENST00000586477 DSG3P32926 999 aa18.89■□□□□ 0.61
ATG4D-205ENST00000586477 GJA8P48165 433 aa18.89■□□□□ 0.61
ATG4D-205ENST00000586477 TFAP4Q01664 338 aa18.89■□□□□ 0.61
ATG4D-205ENST00000586477 ATP2B2Q01814 1243 aa18.89■□□□□ 0.61
ATG4D-205ENST00000586477 PLEKHH3Q7Z736 793 aa18.89■□□□□ 0.61
ATG4D-205ENST00000586477 UBE2Q1Q7Z7E8 422 aa18.89■□□□□ 0.61
ATG4D-205ENST00000586477 NEDD1Q8NHV4 660 aa18.89■□□□□ 0.61
ATG4D-205ENST00000586477 INCENPQ9NQS7 918 aa18.89■□□□□ 0.61
ATG4D-205ENST00000586477 PAK6Q9NQU5 681 aaPredicted RBP18.89■□□□□ 0.61
ATG4D-205ENST00000586477 TCP11L1Q9NUJ3 509 aa18.89■□□□□ 0.61
ATG4D-205ENST00000586477 WDR46O15213 610 aaKnown RBP18.88■□□□□ 0.61
ATG4D-205ENST00000586477 CASTP20810 708 aaKnown RBP18.88■□□□□ 0.61
ATG4D-205ENST00000586477 CYP2B6P20813 491 aa18.88■□□□□ 0.61
ATG4D-205ENST00000586477 STOX1Q6ZVD7 989 aa18.88■□□□□ 0.61
ATG4D-205ENST00000586477 DHX32Q7L7V1 743 aaKnown RBP18.88■□□□□ 0.61
ATG4D-205ENST00000586477 ATG4CQ96DT6 458 aa18.88■□□□□ 0.61
ATG4D-205ENST00000586477 TMEM87BQ96K49 555 aa18.88■□□□□ 0.61
ATG4D-205ENST00000586477 NUDT12Q9BQG2 462 aa18.88■□□□□ 0.61
ATG4D-205ENST00000586477 SH2D4AQ9H788 454 aa18.88■□□□□ 0.61
ATG4D-205ENST00000586477 FBXO28Q9NVF7 368 aa18.88■□□□□ 0.61
ATG4D-205ENST00000586477 NYAP2Q9P242 653 aa18.88■□□□□ 0.61
ATG4D-205ENST00000586477 HMGCRP04035 888 aa18.87■□□□□ 0.61
ATG4D-205ENST00000586477 FGD1P98174 961 aa18.87■□□□□ 0.61
ATG4D-205ENST00000586477 RABEP1Q15276 862 aa18.87■□□□□ 0.61
ATG4D-205ENST00000586477 CCL14Q16627 93 aa18.87■□□□□ 0.61
ATG4D-205ENST00000586477 MAP3K21Q5TCX8 1036 aa18.87■□□□□ 0.61
ATG4D-205ENST00000586477 RUFY3Q7L099 469 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms