RNA–Protein interactions for RNA: ENST00000585395.6

LSM7-202, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM7, Length 621 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-202ENST00000585395 IL25Q9H293 177 aa27.29■■□□□ 1.96
LSM7-202ENST00000585395 ANO2Q9NQ90 1003 aa27.29■■□□□ 1.96
LSM7-202ENST00000585395 TOMM22Q9NS69 142 aa27.29■■□□□ 1.96
LSM7-202ENST00000585395 TMX2Q9Y320 296 aa27.29■■□□□ 1.96
LSM7-202ENST00000585395 FLT3LGP49771 235 aa27.28■■□□□ 1.96
LSM7-202ENST00000585395 SPICE1Q8N0Z3 855 aa27.28■■□□□ 1.96
LSM7-202ENST00000585395 VCPKMTQ9H867 229 aa27.28■■□□□ 1.96
LSM7-202ENST00000585395 ORC4O43929 436 aa27.27■■□□□ 1.96
LSM7-202ENST00000585395 TSPY3P0CV98 308 aa27.27■■□□□ 1.96
LSM7-202ENST00000585395 TSPY8P0CW00 308 aa27.27■■□□□ 1.96
LSM7-202ENST00000585395 HAND2P61296 217 aa27.27■■□□□ 1.96
LSM7-202ENST00000585395 ERVK-9P63128 1117 aa27.27■■□□□ 1.96
LSM7-202ENST00000585395 ERVK-24P63145 666 aa27.27■■□□□ 1.96
LSM7-202ENST00000585395 AKNAD1Q5T1N1 836 aa27.27■■□□□ 1.96
LSM7-202ENST00000585395 REC8O95072 547 aa27.26■■□□□ 1.95
LSM7-202ENST00000585395 INHAP05111 366 aa27.26■■□□□ 1.95
LSM7-202ENST00000585395 BMP8BP34820 402 aa27.26■■□□□ 1.95
LSM7-202ENST00000585395 CCNA1P78396 465 aa27.26■■□□□ 1.95
LSM7-202ENST00000585395 IRF5Q13568 498 aa27.26■■□□□ 1.95
LSM7-202ENST00000585395 WDR78Q5VTH9 848 aa27.26■■□□□ 1.95
LSM7-202ENST00000585395 STAG1Q8WVM7 1258 aa27.26■■□□□ 1.95
LSM7-202ENST00000585395 MAP4K1Q92918 833 aa27.26■■□□□ 1.95
LSM7-202ENST00000585395 DEFB118Q96PH6 123 aa27.26■■□□□ 1.95
LSM7-202ENST00000585395 TXNRD2Q9NNW7 524 aa27.26■■□□□ 1.95
LSM7-202ENST00000585395 DDX52Q9Y2R4 599 aaKnown RBP eCLIP27.26■■□□□ 1.95
LSM7-202ENST00000585395 RABGAP1Q9Y3P9 1069 aa27.26■■□□□ 1.95
LSM7-202ENST00000585395 DOCK3Q8IZD9 2030 aa27.26■■□□□ 1.95
LSM7-202ENST00000585395 TSPY2A6NKD2 308 aa27.25■■□□□ 1.95
LSM7-202ENST00000585395 PEX10O60683 326 aa27.25■■□□□ 1.95
LSM7-202ENST00000585395 CNNM2Q9H8M5 875 aa27.25■■□□□ 1.95
LSM7-202ENST00000585395 PAK6Q9NQU5 681 aaPredicted RBP27.25■■□□□ 1.95
LSM7-202ENST00000585395 RBPJLQ9UBG7 517 aa27.25■■□□□ 1.95
LSM7-202ENST00000585395 LAMA4Q16363 1823 aa27.25■■□□□ 1.95
LSM7-202ENST00000585395 MYH4Q9Y623 1939 aa27.24■■□□□ 1.95
LSM7-202ENST00000585395 WDR46O15213 610 aaKnown RBP27.24■■□□□ 1.95
LSM7-202ENST00000585395 RANBP6O60518 1105 aaKnown RBP27.24■■□□□ 1.95
LSM7-202ENST00000585395 FLOT1O75955 427 aa27.24■■□□□ 1.95
LSM7-202ENST00000585395 FGRP09769 529 aa27.24■■□□□ 1.95
LSM7-202ENST00000585395 ELNP15502 786 aa27.24■■□□□ 1.95
LSM7-202ENST00000585395 MAPK4P31152 587 aa27.24■■□□□ 1.95
LSM7-202ENST00000585395 PTH1RQ03431 593 aa27.24■■□□□ 1.95
LSM7-202ENST00000585395 COG2Q14746 738 aa27.24■■□□□ 1.95
LSM7-202ENST00000585395 NEDD1Q8NHV4 660 aa27.24■■□□□ 1.95
LSM7-202ENST00000585395 CRISPLD2Q9H0B8 497 aa27.24■■□□□ 1.95
LSM7-202ENST00000585395 HOXC10Q9NYD6 342 aa27.24■■□□□ 1.95
LSM7-202ENST00000585395 TFAP4Q01664 338 aa27.23■■□□□ 1.95
LSM7-202ENST00000585395 TRDNQ13061 729 aa27.23■■□□□ 1.95
LSM7-202ENST00000585395 RRP12Q5JTH9 1297 aaKnown RBP27.23■■□□□ 1.95
LSM7-202ENST00000585395 RNF20Q5VTR2 975 aa27.23■■□□□ 1.95
LSM7-202ENST00000585395 SIAH1Q8IUQ4 282 aa27.23■■□□□ 1.95
LSM7-202ENST00000585395 ESR2Q92731 530 aa27.23■■□□□ 1.95
LSM7-202ENST00000585395 GDF15Q99988 308 aa27.23■■□□□ 1.95
LSM7-202ENST00000585395 KRT23Q9C075 422 aa27.23■■□□□ 1.95
LSM7-202ENST00000585395 LSG1Q9H089 658 aaKnown RBP27.23■■□□□ 1.95
LSM7-202ENST00000585395 RBM8AQ9Y5S9 174 aaKnown RBP27.23■■□□□ 1.95
LSM7-202ENST00000585395 GREB1LQ9C091 1923 aaPredicted RBP27.23■■□□□ 1.95
LSM7-202ENST00000585395 PLIN4Q96Q06 1357 aa27.22■■□□□ 1.95
LSM7-202ENST00000585395 SPDYE16A6NNV3 312 aaPredicted RBP27.22■■□□□ 1.95
LSM7-202ENST00000585395 NECAB2Q7Z6G3 386 aa27.22■■□□□ 1.95
LSM7-202ENST00000585395 PAWRQ96IZ0 340 aaKnown RBP27.22■■□□□ 1.95
LSM7-202ENST00000585395 NYAP2Q9P242 653 aa27.22■■□□□ 1.95
LSM7-202ENST00000585395 CLIP2Q9UDT6 1046 aa27.22■■□□□ 1.95
LSM7-202ENST00000585395 FAM47AQ5JRC9 791 aa27.21■■□□□ 1.95
LSM7-202ENST00000585395 KIAA1755Q5JYT7 1200 aa27.21■■□□□ 1.95
LSM7-202ENST00000585395 DEFB123Q8N688 67 aa27.21■■□□□ 1.95
LSM7-202ENST00000585395 NUDT12Q9BQG2 462 aa27.21■■□□□ 1.95
LSM7-202ENST00000585395 ISY1Q9ULR0 285 aaKnown RBP27.21■■□□□ 1.95
LSM7-202ENST00000585395 PLS1Q14651 629 aa27.2■■□□□ 1.94
LSM7-202ENST00000585395 Q3C1V9 767 aa27.2■■□□□ 1.94
LSM7-202ENST00000585395 CCDC178Q5BJE1 867 aa27.2■■□□□ 1.94
LSM7-202ENST00000585395 LBX2Q6XYB7 198 aa27.2■■□□□ 1.94
LSM7-202ENST00000585395 TBC1D10CQ8IV04 446 aa27.2■■□□□ 1.94
LSM7-202ENST00000585395 SOCS4Q8WXH5 440 aa27.2■■□□□ 1.94
LSM7-202ENST00000585395 CEP95Q96GE4 821 aa27.2■■□□□ 1.94
LSM7-202ENST00000585395 GNL3Q9BVP2 549 aaKnown RBP eCLIP27.2■■□□□ 1.94
LSM7-202ENST00000585395 IVNS1ABPQ9Y6Y0 642 aa27.2■■□□□ 1.94
LSM7-202ENST00000585395 ALPK3Q96L96 1907 aa27.2■■□□□ 1.94
LSM7-202ENST00000585395 EPB41L2O43491 1005 aaKnown RBP27.19■■□□□ 1.94
LSM7-202ENST00000585395 TTLL1O95922 423 aa27.19■■□□□ 1.94
LSM7-202ENST00000585395 PLEKHH3Q7Z736 793 aa27.19■■□□□ 1.94
LSM7-202ENST00000585395 ANKLE1Q8NAG6 615 aa27.19■■□□□ 1.94
LSM7-202ENST00000585395 PORCNQ9H237 461 aa27.19■■□□□ 1.94
LSM7-202ENST00000585395 SYNPO2Q9UMS6 1093 aa27.19■■□□□ 1.94
LSM7-202ENST00000585395 STXBP5LQ9Y2K9 1186 aa27.19■■□□□ 1.94
LSM7-202ENST00000585395 DSG3P32926 999 aa27.18■■□□□ 1.94
LSM7-202ENST00000585395 LRIT3Q3SXY7 679 aa27.18■■□□□ 1.94
LSM7-202ENST00000585395 FAM83BQ5T0W9 1011 aa27.18■■□□□ 1.94
LSM7-202ENST00000585395 GPR142Q7Z601 462 aa27.18■■□□□ 1.94
LSM7-202ENST00000585395 RALYLQ86SE5 291 aaKnown RBP27.18■■□□□ 1.94
LSM7-202ENST00000585395 MB21D1Q8N884 522 aa27.18■■□□□ 1.94
LSM7-202ENST00000585395 BTBD7Q9P203 1132 aa27.18■■□□□ 1.94
LSM7-202ENST00000585395 CNMDO75829 334 aa27.17■■□□□ 1.94
LSM7-202ENST00000585395 CYP21A2P08686 494 aa27.17■■□□□ 1.94
LSM7-202ENST00000585395 CYP2B6P20813 491 aa27.17■■□□□ 1.94
LSM7-202ENST00000585395 IQCA1Q86XH1 822 aa27.17■■□□□ 1.94
LSM7-202ENST00000585395 NBPF3Q9H094 633 aa27.17■■□□□ 1.94
LSM7-202ENST00000585395 MTMR4Q9NYA4 1195 aa27.17■■□□□ 1.94
LSM7-202ENST00000585395 IGKV6D-41A0A0C4DH26 115 aa27.16■■□□□ 1.94
LSM7-202ENST00000585395 ZKSCAN1P17029 563 aaPredicted RBP27.16■■□□□ 1.94
LSM7-202ENST00000585395 LRRC47Q8N1G4 583 aaKnown RBP27.16■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 91.6 ms