RNA–Protein interactions for RNA: ENST00000584939.1

ITGB4-213, Transcript of integrin subunit beta 4, humanhuman

TSL 3

Gene ITGB4, Length 603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-213ENST00000584939 PPARAQ07869 468 aa20.42■□□□□ 0.86
ITGB4-213ENST00000584939 TMEM132BQ14DG7 1078 aa20.42■□□□□ 0.86
ITGB4-213ENST00000584939 B4GALNT3Q6L9W6 998 aa20.42■□□□□ 0.86
ITGB4-213ENST00000584939 NECAB2Q7Z6G3 386 aa20.42■□□□□ 0.86
ITGB4-213ENST00000584939 DPP9Q86TI2 863 aa20.42■□□□□ 0.86
ITGB4-213ENST00000584939 NCAPG2Q86XI2 1143 aa20.42■□□□□ 0.86
ITGB4-213ENST00000584939 NPLOC4Q8TAT6 608 aa20.42■□□□□ 0.86
ITGB4-213ENST00000584939 MROH8Q9H579 483 aa20.42■□□□□ 0.86
ITGB4-213ENST00000584939 OGDHLQ9ULD0 1010 aa20.42■□□□□ 0.86
ITGB4-213ENST00000584939 ADAMTS5Q9UNA0 930 aa20.42■□□□□ 0.86
ITGB4-213ENST00000584939 F5H6K3 240 aa20.41■□□□□ 0.86
ITGB4-213ENST00000584939 FOXP2O15409 715 aa20.41■□□□□ 0.86
ITGB4-213ENST00000584939 ADORA2AP29274 412 aa20.41■□□□□ 0.86
ITGB4-213ENST00000584939 KLRC3Q07444 240 aa20.41■□□□□ 0.86
ITGB4-213ENST00000584939 HABP4Q5JVS0 413 aaKnown RBP20.41■□□□□ 0.86
ITGB4-213ENST00000584939 NUP88Q99567 741 aaPredicted RBP20.41■□□□□ 0.86
ITGB4-213ENST00000584939 PPP1R9AQ9ULJ8 1098 aa20.41■□□□□ 0.86
ITGB4-213ENST00000584939 VWA5AO00534 786 aa20.4■□□□□ 0.86
ITGB4-213ENST00000584939 NDUFB10O96000 172 aa20.4■□□□□ 0.86
ITGB4-213ENST00000584939 CEP95Q96GE4 821 aa20.4■□□□□ 0.86
ITGB4-213ENST00000584939 HELLSQ9NRZ9 838 aa20.4■□□□□ 0.86
ITGB4-213ENST00000584939 MTMR4Q9NYA4 1195 aa20.4■□□□□ 0.86
ITGB4-213ENST00000584939 NR2E3Q9Y5X4 410 aa20.4■□□□□ 0.86
ITGB4-213ENST00000584939 RLFQ13129 1914 aa20.39■□□□□ 0.86
ITGB4-213ENST00000584939 EVI5O60447 810 aa20.39■□□□□ 0.85
ITGB4-213ENST00000584939 COBLO75128 1261 aa20.39■□□□□ 0.85
ITGB4-213ENST00000584939 SLC25A27O95847 323 aa20.39■□□□□ 0.85
ITGB4-213ENST00000584939 TSPY3P0CV98 308 aa20.39■□□□□ 0.85
ITGB4-213ENST00000584939 TSPY8P0CW00 308 aa20.39■□□□□ 0.85
ITGB4-213ENST00000584939 MNX1P50219 401 aaPredicted RBP20.39■□□□□ 0.85
ITGB4-213ENST00000584939 TFAP4Q01664 338 aa20.39■□□□□ 0.85
ITGB4-213ENST00000584939 NUCB1Q02818 461 aa20.39■□□□□ 0.85
ITGB4-213ENST00000584939 FAM47AQ5JRC9 791 aa20.39■□□□□ 0.85
ITGB4-213ENST00000584939 VPS53Q5VIR6 699 aa20.39■□□□□ 0.85
ITGB4-213ENST00000584939 LHX8Q68G74 356 aa20.39■□□□□ 0.85
ITGB4-213ENST00000584939 CHD1LQ86WJ1 897 aa20.39■□□□□ 0.85
ITGB4-213ENST00000584939 NEDD1Q8NHV4 660 aa20.39■□□□□ 0.85
ITGB4-213ENST00000584939 MKL1Q969V6 931 aa20.39■□□□□ 0.85
ITGB4-213ENST00000584939 NBPF3Q9H094 633 aa20.39■□□□□ 0.85
ITGB4-213ENST00000584939 COLQQ9Y215 455 aaPredicted RBP20.39■□□□□ 0.85
ITGB4-213ENST00000584939 TRIM6-TRIM34B2RNG4 842 aa20.38■□□□□ 0.85
ITGB4-213ENST00000584939 TTLL1O95922 423 aa20.38■□□□□ 0.85
ITGB4-213ENST00000584939 CYP2C19P33261 490 aa20.38■□□□□ 0.85
ITGB4-213ENST00000584939 STAT3P40763 770 aa20.38■□□□□ 0.85
ITGB4-213ENST00000584939 TICAM2Q86XR7 235 aa20.38■□□□□ 0.85
ITGB4-213ENST00000584939 RIOX2Q8IUF8 465 aa20.38■□□□□ 0.85
ITGB4-213ENST00000584939 ABRAQ8N0Z2 381 aa20.38■□□□□ 0.85
ITGB4-213ENST00000584939 FAM227BQ96M60 508 aa20.38■□□□□ 0.85
ITGB4-213ENST00000584939 SLF1Q9BQI6 1058 aa20.38■□□□□ 0.85
ITGB4-213ENST00000584939 A0A0G2JMZ2 1700 aa20.38■□□□□ 0.85
ITGB4-213ENST00000584939 GREB1LQ9C091 1923 aaPredicted RBP20.37■□□□□ 0.85
ITGB4-213ENST00000584939 IGHA2P01877 340 aa20.37■□□□□ 0.85
ITGB4-213ENST00000584939 FCER1AP12319 257 aa20.37■□□□□ 0.85
ITGB4-213ENST00000584939 CTDSPL2Q05D32 466 aa20.37■□□□□ 0.85
ITGB4-213ENST00000584939 MCMDC2Q4G0Z9 681 aa20.37■□□□□ 0.85
ITGB4-213ENST00000584939 OLFML2BQ68BL8 750 aa20.37■□□□□ 0.85
ITGB4-213ENST00000584939 RILPL2Q969X0 211 aa20.37■□□□□ 0.85
ITGB4-213ENST00000584939 C11orf49Q9H6J7 331 aa20.37■□□□□ 0.85
ITGB4-213ENST00000584939 SLC5A4Q9NY91 659 aa20.37■□□□□ 0.85
ITGB4-213ENST00000584939 PLIN4Q96Q06 1357 aa20.36■□□□□ 0.85
ITGB4-213ENST00000584939 A0A0D9SFI3 127 aa20.36■□□□□ 0.85
ITGB4-213ENST00000584939 CNGA1P29973 690 aa20.36■□□□□ 0.85
ITGB4-213ENST00000584939 ALX1Q15699 326 aa20.36■□□□□ 0.85
ITGB4-213ENST00000584939 PLEKHM2Q8IWE5 1019 aa20.36■□□□□ 0.85
ITGB4-213ENST00000584939 LRRC47Q8N1G4 583 aaKnown RBP20.36■□□□□ 0.85
ITGB4-213ENST00000584939 REPS2Q8NFH8 660 aa20.36■□□□□ 0.85
ITGB4-213ENST00000584939 INCENPQ9NQS7 918 aa20.36■□□□□ 0.85
ITGB4-213ENST00000584939 ZNF214Q9UL59 606 aaPredicted RBP20.36■□□□□ 0.85
ITGB4-213ENST00000584939 SYNPO2Q9UMS6 1093 aa20.36■□□□□ 0.85
ITGB4-213ENST00000584939 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.36■□□□□ 0.85
ITGB4-213ENST00000584939 NMIQ13287 307 aaPredicted RBP20.35■□□□□ 0.85
ITGB4-213ENST00000584939 CHRDL2Q6WN34 429 aa20.35■□□□□ 0.85
ITGB4-213ENST00000584939 PRPF38AQ8NAV1 312 aaKnown RBP20.35■□□□□ 0.85
ITGB4-213ENST00000584939 GMCL1P1Q8NEA9 526 aa20.35■□□□□ 0.85
ITGB4-213ENST00000584939 TRPV1Q8NER1 839 aa20.35■□□□□ 0.85
ITGB4-213ENST00000584939 MMP19Q99542 508 aa20.35■□□□□ 0.85
ITGB4-213ENST00000584939 DDX20Q9UHI6 824 aaKnown RBP20.35■□□□□ 0.85
ITGB4-213ENST00000584939 ANAPC4Q9UJX5 808 aa20.35■□□□□ 0.85
ITGB4-213ENST00000584939 COPB2P35606 906 aa20.34■□□□□ 0.85
ITGB4-213ENST00000584939 SLFN13Q68D06 897 aa20.34■□□□□ 0.85
ITGB4-213ENST00000584939 TSPY2A6NKD2 308 aa20.33■□□□□ 0.85
ITGB4-213ENST00000584939 MSCO60682 206 aa20.33■□□□□ 0.85
ITGB4-213ENST00000584939 ZBED4O75132 1171 aa20.33■□□□□ 0.85
ITGB4-213ENST00000584939 FGAP02671 866 aa20.33■□□□□ 0.85
ITGB4-213ENST00000584939 CYBAP13498 195 aa20.33■□□□□ 0.85
ITGB4-213ENST00000584939 KCTD2Q14681 263 aa20.33■□□□□ 0.85
ITGB4-213ENST00000584939 PPP4R3BQ5MIZ7 849 aa20.33■□□□□ 0.85
ITGB4-213ENST00000584939 KIFC2Q96AC6 838 aa20.33■□□□□ 0.85
ITGB4-213ENST00000584939 MAML3Q96JK9 1138 aa20.33■□□□□ 0.85
ITGB4-213ENST00000584939 TEX13BQ9BXU2 312 aa20.33■□□□□ 0.85
ITGB4-213ENST00000584939 OSBPL3Q9H4L5 887 aa20.33■□□□□ 0.85
ITGB4-213ENST00000584939 FEM1BQ9UK73 627 aa20.33■□□□□ 0.85
ITGB4-213ENST00000584939 CTDP1Q9Y5B0 961 aaPredicted RBP20.33■□□□□ 0.85
ITGB4-213ENST00000584939 TACC3Q9Y6A5 838 aa20.33■□□□□ 0.85
ITGB4-213ENST00000584939 RANBP6O60518 1105 aaKnown RBP20.32■□□□□ 0.84
ITGB4-213ENST00000584939 PGK2P07205 417 aa20.32■□□□□ 0.84
ITGB4-213ENST00000584939 PDE4AP27815 886 aa20.32■□□□□ 0.84
ITGB4-213ENST00000584939 SNRNP48Q6IEG0 339 aaKnown RBP20.32■□□□□ 0.84
ITGB4-213ENST00000584939 ZNF589Q86UQ0 364 aaPredicted RBP20.32■□□□□ 0.84
ITGB4-213ENST00000584939 ZNF236Q9UL36 1845 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms