RNA–Protein interactions for RNA: ENST00000584558.5

ITGB4-212, Transcript of integrin subunit beta 4, humanhuman

TSL 1 (best)

Gene ITGB4, Length 2,895 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-212ENST00000584558 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.35□□□□□ -0.11
ITGB4-212ENST00000584558 MBD4O95243 580 aa14.35□□□□□ -0.11
ITGB4-212ENST00000584558 KLRK1P26718 216 aa14.35□□□□□ -0.11
ITGB4-212ENST00000584558 CPLX2Q6PUV4 134 aaKnown RBP14.35□□□□□ -0.11
ITGB4-212ENST00000584558 EHD4Q9H223 541 aa14.35□□□□□ -0.11
ITGB4-212ENST00000584558 CAPN7Q9Y6W3 813 aa14.35□□□□□ -0.11
ITGB4-212ENST00000584558 IBSPP21815 317 aaPredicted RBP14.35□□□□□ -0.11
ITGB4-212ENST00000584558 SYKP43405 635 aa14.35□□□□□ -0.11
ITGB4-212ENST00000584558 SLC35F6Q8N357 371 aa14.35□□□□□ -0.11
ITGB4-212ENST00000584558 BCAS4Q8TDM0 211 aa14.35□□□□□ -0.11
ITGB4-212ENST00000584558 CPLX3Q8WVH0 158 aa14.35□□□□□ -0.11
ITGB4-212ENST00000584558 ARMT1Q9H993 441 aa14.35□□□□□ -0.11
ITGB4-212ENST00000584558 DENND2AQ9ULE3 1009 aa14.35□□□□□ -0.11
ITGB4-212ENST00000584558 PDS5AQ29RF7 1337 aaKnown RBP14.34□□□□□ -0.11
ITGB4-212ENST00000584558 GSG1L2A8MUP6 293 aa14.34□□□□□ -0.11
ITGB4-212ENST00000584558 PRC1O43663 620 aa14.34□□□□□ -0.11
ITGB4-212ENST00000584558 GYS1P13807 737 aa14.34□□□□□ -0.11
ITGB4-212ENST00000584558 SYNE3Q6ZMZ3 975 aa14.34□□□□□ -0.11
ITGB4-212ENST00000584558 ADGRA1Q86SQ6 560 aa14.34□□□□□ -0.11
ITGB4-212ENST00000584558 IFNL3Q8IZI9 196 aa14.34□□□□□ -0.11
ITGB4-212ENST00000584558 LCORLQ8N3X6 602 aa14.34□□□□□ -0.11
ITGB4-212ENST00000584558 CTCFLQ8NI51 663 aaPredicted RBP14.34□□□□□ -0.11
ITGB4-212ENST00000584558 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.34□□□□□ -0.11
ITGB4-212ENST00000584558 MAST2Q6P0Q8 1798 aa14.34□□□□□ -0.11
ITGB4-212ENST00000584558 POTEDQ86YR6 584 aa14.34□□□□□ -0.11
ITGB4-212ENST00000584558 ANKRD2Q9GZV1 360 aa14.34□□□□□ -0.11
ITGB4-212ENST00000584558 GNL3LQ9NVN8 582 aaKnown RBP14.34□□□□□ -0.11
ITGB4-212ENST00000584558 IQSEC3Q9UPP2 1182 aaPredicted RBP14.34□□□□□ -0.11
ITGB4-212ENST00000584558 SAMM50Q9Y512 469 aa14.34□□□□□ -0.11
ITGB4-212ENST00000584558 TACC3Q9Y6A5 838 aa14.34□□□□□ -0.11
ITGB4-212ENST00000584558 NCAPH2Q6IBW4 605 aa14.33□□□□□ -0.11
ITGB4-212ENST00000584558 RAD9BQ6WBX8 426 aa14.33□□□□□ -0.11
ITGB4-212ENST00000584558 FAM76AQ8TAV0 307 aa14.33□□□□□ -0.11
ITGB4-212ENST00000584558 CAMKK2Q96RR4 588 aa14.33□□□□□ -0.11
ITGB4-212ENST00000584558 ADGRG1Q9Y653 693 aa14.33□□□□□ -0.11
ITGB4-212ENST00000584558 SHTN1A0MZ66 631 aa14.33□□□□□ -0.12
ITGB4-212ENST00000584558 CCDC189A1A4V9 331 aa14.33□□□□□ -0.12
ITGB4-212ENST00000584558 MYO1FO00160 1098 aa14.33□□□□□ -0.12
ITGB4-212ENST00000584558 SEMA3EO15041 775 aa14.33□□□□□ -0.12
ITGB4-212ENST00000584558 YEATS4O95619 227 aa14.33□□□□□ -0.12
ITGB4-212ENST00000584558 CAVIN4Q5BKX8 364 aa14.33□□□□□ -0.12
ITGB4-212ENST00000584558 CYB5R4Q7L1T6 521 aa14.33□□□□□ -0.12
ITGB4-212ENST00000584558 ZNF384Q8TF68 577 aa14.33□□□□□ -0.12
ITGB4-212ENST00000584558 TUBE1Q9UJT0 475 aa14.33□□□□□ -0.12
ITGB4-212ENST00000584558 HPCAL4Q9UM19 191 aa14.33□□□□□ -0.12
ITGB4-212ENST00000584558 HPS5Q9UPZ3 1129 aa14.33□□□□□ -0.12
ITGB4-212ENST00000584558 KIAA1551Q9HCM1 1747 aa14.33□□□□□ -0.12
ITGB4-212ENST00000584558 PRKAB2O43741 272 aa14.32□□□□□ -0.12
ITGB4-212ENST00000584558 GGCXP38435 758 aa14.32□□□□□ -0.12
ITGB4-212ENST00000584558 IRAK1P51617 712 aa14.32□□□□□ -0.12
ITGB4-212ENST00000584558 PDE4BQ07343 736 aa14.32□□□□□ -0.12
ITGB4-212ENST00000584558 MSL1Q68DK7 614 aa14.32□□□□□ -0.12
ITGB4-212ENST00000584558 TTC19Q6DKK2 380 aaPredicted RBP14.32□□□□□ -0.12
ITGB4-212ENST00000584558 PRR5LQ6MZQ0 368 aa14.32□□□□□ -0.12
ITGB4-212ENST00000584558 CABS1Q96KC9 395 aa14.32□□□□□ -0.12
ITGB4-212ENST00000584558 GJB4Q9NTQ9 266 aa14.32□□□□□ -0.12
ITGB4-212ENST00000584558 POLR3EQ9NVU0 708 aa14.32□□□□□ -0.12
ITGB4-212ENST00000584558 LRP2BPQ9P2M1 347 aa14.32□□□□□ -0.12
ITGB4-212ENST00000584558 GNAT2P19087 354 aa14.32□□□□□ -0.12
ITGB4-212ENST00000584558 CMA1P23946 247 aa14.32□□□□□ -0.12
ITGB4-212ENST00000584558 CDC27P30260 824 aa14.32□□□□□ -0.12
ITGB4-212ENST00000584558 RDXP35241 583 aaKnown RBP14.32□□□□□ -0.12
ITGB4-212ENST00000584558 AARSP49588 968 aaKnown RBP eCLIP14.32□□□□□ -0.12
ITGB4-212ENST00000584558 TUBB4BP68371 445 aa14.32□□□□□ -0.12
ITGB4-212ENST00000584558 STIM1Q13586 685 aa14.32□□□□□ -0.12
ITGB4-212ENST00000584558 LRCH2Q5VUJ6 765 aa14.32□□□□□ -0.12
ITGB4-212ENST00000584558 MYSM1Q5VVJ2 828 aa14.32□□□□□ -0.12
ITGB4-212ENST00000584558 TRMT44Q8IYL2 757 aaKnown RBP14.32□□□□□ -0.12
ITGB4-212ENST00000584558 CCDC148Q8NFR7 591 aa14.32□□□□□ -0.12
ITGB4-212ENST00000584558 CRACR2AQ9BSW2 395 aa14.32□□□□□ -0.12
ITGB4-212ENST00000584558 CD248Q9HCU0 757 aa14.32□□□□□ -0.12
ITGB4-212ENST00000584558 TFCP2L1Q9NZI6 479 aa14.32□□□□□ -0.12
ITGB4-212ENST00000584558 GOLGA6CA6NDK9 693 aa14.32□□□□□ -0.12
ITGB4-212ENST00000584558 GOLGA6DP0CG33 693 aa14.32□□□□□ -0.12
ITGB4-212ENST00000584558 SLC51AQ86UW1 340 aa14.32□□□□□ -0.12
ITGB4-212ENST00000584558 CNBD1Q8NA66 436 aa14.32□□□□□ -0.12
ITGB4-212ENST00000584558 C8orf76Q96K31 380 aa14.32□□□□□ -0.12
ITGB4-212ENST00000584558 NAPGQ99747 312 aaPredicted RBP14.32□□□□□ -0.12
ITGB4-212ENST00000584558 GOLGA6AQ9NYA3 693 aa14.32□□□□□ -0.12
ITGB4-212ENST00000584558 NFE2L3Q9Y4A8 694 aa14.32□□□□□ -0.12
ITGB4-212ENST00000584558 AKR1B15C9JRZ8 316 aaPredicted RBP14.31□□□□□ -0.12
ITGB4-212ENST00000584558 GRAPQ13588 217 aa14.31□□□□□ -0.12
ITGB4-212ENST00000584558 CRY2Q49AN0 593 aa14.31□□□□□ -0.12
ITGB4-212ENST00000584558 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.31□□□□□ -0.12
ITGB4-212ENST00000584558 RALYLQ86SE5 291 aaKnown RBP14.31□□□□□ -0.12
ITGB4-212ENST00000584558 GRAPLQ8TC17 118 aaPredicted RBP14.31□□□□□ -0.12
ITGB4-212ENST00000584558 RIOK1Q9BRS2 568 aaKnown RBP14.31□□□□□ -0.12
ITGB4-212ENST00000584558 VIPAS39Q9H9C1 493 aa14.31□□□□□ -0.12
ITGB4-212ENST00000584558 ZMYND10O75800 440 aa14.31□□□□□ -0.12
ITGB4-212ENST00000584558 FDPSP14324 419 aaKnown RBP14.31□□□□□ -0.12
ITGB4-212ENST00000584558 ANO1Q5XXA6 986 aa14.31□□□□□ -0.12
ITGB4-212ENST00000584558 GSPT2Q8IYD1 628 aaKnown RBP14.31□□□□□ -0.12
ITGB4-212ENST00000584558 SH2B2O14492 632 aaPredicted RBP14.3□□□□□ -0.12
ITGB4-212ENST00000584558 SHOX2O60902 331 aaPredicted RBP14.3□□□□□ -0.12
ITGB4-212ENST00000584558 ABL1P00519 1130 aa14.3□□□□□ -0.12
ITGB4-212ENST00000584558 TUBBP07437 444 aa14.3□□□□□ -0.12
ITGB4-212ENST00000584558 CYP7A1P22680 504 aa14.3□□□□□ -0.12
ITGB4-212ENST00000584558 WHAMMP3Q1A5X7 153 aa14.3□□□□□ -0.12
ITGB4-212ENST00000584558 PRPF38AQ8NAV1 312 aaKnown RBP14.3□□□□□ -0.12
ITGB4-212ENST00000584558 UPF1Q92900 1129 aaKnown RBP eCLIP14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms