RNA–Protein interactions for RNA: ENST00000584340.1

PSMD11-210, Transcript of proteasome 26S subunit, non-ATPase 11, humanhuman

TSL 4

Gene PSMD11, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD11-210ENST00000584340 PDHBP11177 359 aa12.66□□□□□ -0.38
PSMD11-210ENST00000584340 ATP2B2Q01814 1243 aa12.66□□□□□ -0.38
PSMD11-210ENST00000584340 TROAPQ12815 778 aa12.66□□□□□ -0.38
PSMD11-210ENST00000584340 SLFN13Q68D06 897 aa12.66□□□□□ -0.38
PSMD11-210ENST00000584340 BTNL9Q6UXG8 535 aa12.66□□□□□ -0.38
PSMD11-210ENST00000584340 PARK7Q99497 189 aaKnown RBP12.66□□□□□ -0.38
PSMD11-210ENST00000584340 KIF2CQ99661 725 aa12.66□□□□□ -0.38
PSMD11-210ENST00000584340 MTA3Q9BTC8 594 aa12.66□□□□□ -0.38
PSMD11-210ENST00000584340 AGXT2Q9BYV1 514 aa12.66□□□□□ -0.38
PSMD11-210ENST00000584340 ARHGAP39Q9C0H5 1083 aa12.66□□□□□ -0.38
PSMD11-210ENST00000584340 SH2D4AQ9H788 454 aa12.66□□□□□ -0.38
PSMD11-210ENST00000584340 LY9Q9HBG7 655 aa12.66□□□□□ -0.38
PSMD11-210ENST00000584340 TOMM22Q9NS69 142 aa12.66□□□□□ -0.38
PSMD11-210ENST00000584340 STX8Q9UNK0 236 aa12.66□□□□□ -0.38
PSMD11-210ENST00000584340 MYPNQ86TC9 1320 aa12.65□□□□□ -0.38
PSMD11-210ENST00000584340 CPA1P15085 419 aa12.65□□□□□ -0.38
PSMD11-210ENST00000584340 MCCP23508 829 aa12.65□□□□□ -0.38
PSMD11-210ENST00000584340 COG2Q14746 738 aa12.65□□□□□ -0.38
PSMD11-210ENST00000584340 TTBK2Q6IQ55 1244 aa12.65□□□□□ -0.38
PSMD11-210ENST00000584340 FBXL16Q8N461 479 aa12.65□□□□□ -0.38
PSMD11-210ENST00000584340 NEK1Q96PY6 1258 aa12.65□□□□□ -0.38
PSMD11-210ENST00000584340 GOPCQ9HD26 462 aa12.65□□□□□ -0.38
PSMD11-210ENST00000584340 PPP1R9AQ9ULJ8 1098 aa12.65□□□□□ -0.38
PSMD11-210ENST00000584340 WDR19Q8NEZ3 1342 aa12.64□□□□□ -0.39
PSMD11-210ENST00000584340 VWA5AO00534 786 aa12.64□□□□□ -0.39
PSMD11-210ENST00000584340 SH2B2O14492 632 aaPredicted RBP12.64□□□□□ -0.39
PSMD11-210ENST00000584340 OSBPP22059 807 aa12.64□□□□□ -0.39
PSMD11-210ENST00000584340 GCLCP48506 637 aaPredicted RBP12.64□□□□□ -0.39
PSMD11-210ENST00000584340 LACTBP83111 547 aaPredicted RBP12.64□□□□□ -0.39
PSMD11-210ENST00000584340 SP3Q02447 781 aa12.64□□□□□ -0.39
PSMD11-210ENST00000584340 ZNF543Q08ER8 600 aa12.64□□□□□ -0.39
PSMD11-210ENST00000584340 FAM110CQ1W6H9 321 aa12.64□□□□□ -0.39
PSMD11-210ENST00000584340 COL13A1Q5TAT6 717 aaPredicted RBP12.64□□□□□ -0.39
PSMD11-210ENST00000584340 SGMS1Q86VZ5 419 aa12.64□□□□□ -0.39
PSMD11-210ENST00000584340 IQCA1Q86XH1 822 aa12.64□□□□□ -0.39
PSMD11-210ENST00000584340 ANKRD13CQ8N6S4 541 aa12.64□□□□□ -0.39
PSMD11-210ENST00000584340 ATG4CQ96DT6 458 aa12.64□□□□□ -0.39
PSMD11-210ENST00000584340 TRIM47Q96LD4 638 aa12.64□□□□□ -0.39
PSMD11-210ENST00000584340 BEGAINQ9BUH8 593 aa12.64□□□□□ -0.39
PSMD11-210ENST00000584340 ZSWIM6Q9HCJ5 1215 aa12.64□□□□□ -0.39
PSMD11-210ENST00000584340 HOXC10Q9NYD6 342 aa12.64□□□□□ -0.39
PSMD11-210ENST00000584340 ZNF214Q9UL59 606 aaPredicted RBP12.64□□□□□ -0.39
PSMD11-210ENST00000584340 ZNF536O15090 1300 aa12.63□□□□□ -0.39
PSMD11-210ENST00000584340 PRC1O43663 620 aa12.63□□□□□ -0.39
PSMD11-210ENST00000584340 FKTNO75072 461 aa12.63□□□□□ -0.39
PSMD11-210ENST00000584340 IGHA2P01877 340 aa12.63□□□□□ -0.39
PSMD11-210ENST00000584340 BMP3P12645 472 aa12.63□□□□□ -0.39
PSMD11-210ENST00000584340 LIFRP42702 1097 aa12.63□□□□□ -0.39
PSMD11-210ENST00000584340 PABPC4Q13310 644 aaKnown RBP eCLIP12.63□□□□□ -0.39
PSMD11-210ENST00000584340 TMEM132BQ14DG7 1078 aa12.63□□□□□ -0.39
PSMD11-210ENST00000584340 CCDC178Q5BJE1 867 aa12.63□□□□□ -0.39
PSMD11-210ENST00000584340 PPP4R3BQ5MIZ7 849 aa12.63□□□□□ -0.39
PSMD11-210ENST00000584340 RNF20Q5VTR2 975 aa12.63□□□□□ -0.39
PSMD11-210ENST00000584340 KCTD1Q719H9 257 aa12.63□□□□□ -0.39
PSMD11-210ENST00000584340 DHX32Q7L7V1 743 aaKnown RBP12.63□□□□□ -0.39
PSMD11-210ENST00000584340 STAG2Q8N3U4 1231 aa12.63□□□□□ -0.39
PSMD11-210ENST00000584340 PNMA1Q8ND90 353 aa12.63□□□□□ -0.39
PSMD11-210ENST00000584340 DCAF4Q8WV16 495 aa12.63□□□□□ -0.39
PSMD11-210ENST00000584340 TCEANC2Q96MN5 208 aa12.63□□□□□ -0.39
PSMD11-210ENST00000584340 LRRC2Q9BYS8 371 aa12.63□□□□□ -0.39
PSMD11-210ENST00000584340 TM6SF1Q9BZW5 370 aa12.63□□□□□ -0.39
PSMD11-210ENST00000584340 PORCNQ9H237 461 aa12.63□□□□□ -0.39
PSMD11-210ENST00000584340 MAD2L2Q9UI95 211 aa12.63□□□□□ -0.39
PSMD11-210ENST00000584340 GJD2Q9UKL4 321 aa12.63□□□□□ -0.39
PSMD11-210ENST00000584340 PNMA3Q9UL41 463 aa12.63□□□□□ -0.39
PSMD11-210ENST00000584340 RABGAP1Q9Y3P9 1069 aa12.63□□□□□ -0.39
PSMD11-210ENST00000584340 ZNFX1Q9P2E3 1918 aaKnown RBP12.62□□□□□ -0.39
PSMD11-210ENST00000584340 BAZ2BQ9UIF8 2168 aaKnown RBP12.62□□□□□ -0.39
PSMD11-210ENST00000584340 PALM3A6NDB9 673 aaPredicted RBP12.62□□□□□ -0.39
PSMD11-210ENST00000584340 IFIT3O14879 490 aaKnown RBP12.62□□□□□ -0.39
PSMD11-210ENST00000584340 ATP2A1O14983 1001 aa12.62□□□□□ -0.39
PSMD11-210ENST00000584340 FLOT1O75955 427 aa12.62□□□□□ -0.39
PSMD11-210ENST00000584340 MCM5P33992 734 aa12.62□□□□□ -0.39
PSMD11-210ENST00000584340 EVCP57679 992 aa12.62□□□□□ -0.39
PSMD11-210ENST00000584340 ERVK-9P63128 1117 aa12.62□□□□□ -0.39
PSMD11-210ENST00000584340 ERVK-24P63145 666 aa12.62□□□□□ -0.39
PSMD11-210ENST00000584340 IRX3P78415 501 aaPredicted RBP12.62□□□□□ -0.39
PSMD11-210ENST00000584340 TRDNQ13061 729 aa12.62□□□□□ -0.39
PSMD11-210ENST00000584340 NBPF11Q86T75 865 aa12.62□□□□□ -0.39
PSMD11-210ENST00000584340 CD99L2Q8TCZ2 262 aa12.62□□□□□ -0.39
PSMD11-210ENST00000584340 USP6NLQ92738 828 aa12.62□□□□□ -0.39
PSMD11-210ENST00000584340 TMEM87BQ96K49 555 aa12.62□□□□□ -0.39
PSMD11-210ENST00000584340 CPVLQ9H3G5 476 aa12.62□□□□□ -0.39
PSMD11-210ENST00000584340 SLC38A10Q9HBR0 1119 aa12.62□□□□□ -0.39
PSMD11-210ENST00000584340 FAM217BQ9NTX9 383 aaPredicted RBP12.62□□□□□ -0.39
PSMD11-210ENST00000584340 FEM1BQ9UK73 627 aa12.62□□□□□ -0.39
PSMD11-210ENST00000584340 BRPF3Q9ULD4 1205 aa12.62□□□□□ -0.39
PSMD11-210ENST00000584340 RIPK3Q9Y572 518 aa12.62□□□□□ -0.39
PSMD11-210ENST00000584340 TMEM232C9JQI7 657 aa12.61□□□□□ -0.39
PSMD11-210ENST00000584340 CYTH3O43739 400 aa12.61□□□□□ -0.39
PSMD11-210ENST00000584340 RPS6KB1P23443 525 aa12.61□□□□□ -0.39
PSMD11-210ENST00000584340 SLC1A4P43007 532 aa12.61□□□□□ -0.39
PSMD11-210ENST00000584340 KRT32Q14532 448 aa12.61□□□□□ -0.39
PSMD11-210ENST00000584340 IFIT1BQ5T764 474 aaKnown RBP12.61□□□□□ -0.39
PSMD11-210ENST00000584340 OTOP1Q7RTM1 612 aa12.61□□□□□ -0.39
PSMD11-210ENST00000584340 RALYLQ86SE5 291 aaKnown RBP12.61□□□□□ -0.39
PSMD11-210ENST00000584340 PRPF38AQ8NAV1 312 aaKnown RBP12.61□□□□□ -0.39
PSMD11-210ENST00000584340 SMCR8Q8TEV9 937 aaPredicted RBP12.61□□□□□ -0.39
PSMD11-210ENST00000584340 CHMP4CQ96CF2 233 aa12.61□□□□□ -0.39
PSMD11-210ENST00000584340 MTMR8Q96EF0 704 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms