RNA–Protein interactions for RNA: ENST00000583697.1

CDK5RAP3-229, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 852 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-229ENST00000583697 COPB2P35606 906 aa10.42□□□□□ -0.74
CDK5RAP3-229ENST00000583697 KCTD2Q14681 263 aa10.42□□□□□ -0.74
CDK5RAP3-229ENST00000583697 KIAA1755Q5JYT7 1200 aa10.42□□□□□ -0.74
CDK5RAP3-229ENST00000583697 STK11IPQ8N1F8 1099 aa10.42□□□□□ -0.74
CDK5RAP3-229ENST00000583697 LRCH3Q96II8 777 aa10.42□□□□□ -0.74
CDK5RAP3-229ENST00000583697 MMP19Q99542 508 aa10.42□□□□□ -0.74
CDK5RAP3-229ENST00000583697 ZNF287Q9HBT7 754 aa10.42□□□□□ -0.74
CDK5RAP3-229ENST00000583697 SZT2Q5T011 3432 aa10.42□□□□□ -0.74
CDK5RAP3-229ENST00000583697 MINDY4BA8MYZ0 360 aa10.41□□□□□ -0.74
CDK5RAP3-229ENST00000583697 SMIM22K7EJ46 135 aa10.41□□□□□ -0.74
CDK5RAP3-229ENST00000583697 SOX1O00570 391 aaPredicted RBP10.41□□□□□ -0.74
CDK5RAP3-229ENST00000583697 SEPT4O43236 478 aa10.41□□□□□ -0.74
CDK5RAP3-229ENST00000583697 GPAA1O43292 621 aa10.41□□□□□ -0.74
CDK5RAP3-229ENST00000583697 APPP05067 770 aa10.41□□□□□ -0.74
CDK5RAP3-229ENST00000583697 GNAT2P19087 354 aa10.41□□□□□ -0.74
CDK5RAP3-229ENST00000583697 ATN1P54259 1190 aaPredicted RBP10.41□□□□□ -0.74
CDK5RAP3-229ENST00000583697 TMEM132BQ14DG7 1078 aa10.41□□□□□ -0.74
CDK5RAP3-229ENST00000583697 SBK1Q52WX2 424 aa10.41□□□□□ -0.74
CDK5RAP3-229ENST00000583697 FAM83BQ5T0W9 1011 aa10.41□□□□□ -0.74
CDK5RAP3-229ENST00000583697 ANO1Q5XXA6 986 aa10.41□□□□□ -0.74
CDK5RAP3-229ENST00000583697 TSHZ3Q63HK5 1081 aa10.41□□□□□ -0.74
CDK5RAP3-229ENST00000583697 GIMAP6Q6P9H5 292 aa10.41□□□□□ -0.74
CDK5RAP3-229ENST00000583697 ARRDC4Q8NCT1 418 aa10.41□□□□□ -0.74
CDK5RAP3-229ENST00000583697 MAML3Q96JK9 1138 aa10.41□□□□□ -0.74
CDK5RAP3-229ENST00000583697 LBHD1Q9BQE6 289 aaPredicted RBP10.41□□□□□ -0.74
CDK5RAP3-229ENST00000583697 PPP1R9AQ9ULJ8 1098 aa10.41□□□□□ -0.74
CDK5RAP3-229ENST00000583697 CTDP1Q9Y5B0 961 aaPredicted RBP10.41□□□□□ -0.74
CDK5RAP3-229ENST00000583697 TTC41PQ6P2S7 1318 aa10.4□□□□□ -0.74
CDK5RAP3-229ENST00000583697 RANBP2P49792 3224 aaKnown RBP10.4□□□□□ -0.74
CDK5RAP3-229ENST00000583697 ERC2O15083 957 aa10.4□□□□□ -0.74
CDK5RAP3-229ENST00000583697 MDM2Q00987 491 aaPredicted RBP10.4□□□□□ -0.74
CDK5RAP3-229ENST00000583697 GJC2Q5T442 439 aaPredicted RBP10.4□□□□□ -0.74
CDK5RAP3-229ENST00000583697 RIOX2Q8IUF8 465 aa10.4□□□□□ -0.74
CDK5RAP3-229ENST00000583697 SIAH1Q8IUQ4 282 aa10.4□□□□□ -0.74
CDK5RAP3-229ENST00000583697 TRPV1Q8NER1 839 aa10.4□□□□□ -0.74
CDK5RAP3-229ENST00000583697 STRBPQ96SI9 672 aaKnown RBP10.4□□□□□ -0.74
CDK5RAP3-229ENST00000583697 FSD1Q9BTV5 496 aa10.4□□□□□ -0.74
CDK5RAP3-229ENST00000583697 NACAP1Q9BZK3 213 aa10.4□□□□□ -0.74
CDK5RAP3-229ENST00000583697 DCTPP1Q9H773 170 aa10.4□□□□□ -0.74
CDK5RAP3-229ENST00000583697 FBXO28Q9NVF7 368 aa10.4□□□□□ -0.74
CDK5RAP3-229ENST00000583697 ZBTB47Q9UFB7 747 aaPredicted RBP10.4□□□□□ -0.74
CDK5RAP3-229ENST00000583697 ATP11BQ9Y2G3 1177 aa10.4□□□□□ -0.74
CDK5RAP3-229ENST00000583697 LAMA3Q16787 3333 aa10.39□□□□□ -0.75
CDK5RAP3-229ENST00000583697 GSG1L2A8MUP6 293 aa10.39□□□□□ -0.75
CDK5RAP3-229ENST00000583697 VWA5AO00534 786 aa10.39□□□□□ -0.75
CDK5RAP3-229ENST00000583697 RNF113AO15541 343 aaKnown RBP10.39□□□□□ -0.75
CDK5RAP3-229ENST00000583697 COBLO75128 1261 aa10.39□□□□□ -0.75
CDK5RAP3-229ENST00000583697 RASA1P20936 1047 aa10.39□□□□□ -0.75
CDK5RAP3-229ENST00000583697 RTP1P59025 263 aa10.39□□□□□ -0.75
CDK5RAP3-229ENST00000583697 LRIT3Q3SXY7 679 aa10.39□□□□□ -0.75
CDK5RAP3-229ENST00000583697 FAM47AQ5JRC9 791 aa10.39□□□□□ -0.75
CDK5RAP3-229ENST00000583697 ZNF444Q8N0Y2 327 aaPredicted RBP10.39□□□□□ -0.75
CDK5RAP3-229ENST00000583697 OSBP2Q969R2 916 aa10.39□□□□□ -0.75
CDK5RAP3-229ENST00000583697 SLF1Q9BQI6 1058 aa10.39□□□□□ -0.75
CDK5RAP3-229ENST00000583697 TEX13BQ9BXU2 312 aa10.39□□□□□ -0.75
CDK5RAP3-229ENST00000583697 EPB41L4AQ9HCS5 686 aaPredicted RBP10.39□□□□□ -0.75
CDK5RAP3-229ENST00000583697 PRDM5Q9NQX1 630 aaPredicted RBP10.39□□□□□ -0.75
CDK5RAP3-229ENST00000583697 ZNF214Q9UL59 606 aaPredicted RBP10.39□□□□□ -0.75
CDK5RAP3-229ENST00000583697 ISY1Q9ULR0 285 aaKnown RBP10.39□□□□□ -0.75
CDK5RAP3-229ENST00000583697 ZNFX1Q9P2E3 1918 aaKnown RBP10.39□□□□□ -0.75
CDK5RAP3-229ENST00000583697 F5H6K3 240 aa10.38□□□□□ -0.75
CDK5RAP3-229ENST00000583697 M0R2C6 588 aa10.38□□□□□ -0.75
CDK5RAP3-229ENST00000583697 NDUFB10O96000 172 aa10.38□□□□□ -0.75
CDK5RAP3-229ENST00000583697 PGK2P07205 417 aa10.38□□□□□ -0.75
CDK5RAP3-229ENST00000583697 SLC3A2P08195 630 aaKnown RBP10.38□□□□□ -0.75
CDK5RAP3-229ENST00000583697 TSPY3P0CV98 308 aa10.38□□□□□ -0.75
CDK5RAP3-229ENST00000583697 TSPY8P0CW00 308 aa10.38□□□□□ -0.75
CDK5RAP3-229ENST00000583697 RARBP10826 455 aa10.38□□□□□ -0.75
CDK5RAP3-229ENST00000583697 STAT3P40763 770 aa10.38□□□□□ -0.75
CDK5RAP3-229ENST00000583697 PDE4BQ07343 736 aa10.38□□□□□ -0.75
CDK5RAP3-229ENST00000583697 KLRC3Q07444 240 aa10.38□□□□□ -0.75
CDK5RAP3-229ENST00000583697 SNRNP48Q6IEG0 339 aaKnown RBP10.38□□□□□ -0.75
CDK5RAP3-229ENST00000583697 GPR153Q6NV75 609 aa10.38□□□□□ -0.75
CDK5RAP3-229ENST00000583697 NUP88Q99567 741 aaPredicted RBP10.38□□□□□ -0.75
CDK5RAP3-229ENST00000583697 NAPBQ9H115 298 aa10.38□□□□□ -0.75
CDK5RAP3-229ENST00000583697 XPNPEP3Q9NQH7 507 aa10.38□□□□□ -0.75
CDK5RAP3-229ENST00000583697 NYAP2Q9P242 653 aa10.38□□□□□ -0.75
CDK5RAP3-229ENST00000583697 NRBP1Q9UHY1 535 aa10.38□□□□□ -0.75
CDK5RAP3-229ENST00000583697 ADAMTS5Q9UNA0 930 aa10.38□□□□□ -0.75
CDK5RAP3-229ENST00000583697 CNPY2Q9Y2B0 182 aa10.38□□□□□ -0.75
CDK5RAP3-229ENST00000583697 SUPT16HQ9Y5B9 1047 aaKnown RBP10.38□□□□□ -0.75
CDK5RAP3-229ENST00000583697 PLIN4Q96Q06 1357 aa10.38□□□□□ -0.75
CDK5RAP3-229ENST00000583697 TRIOBPQ9H2D6 2365 aa10.37□□□□□ -0.75
CDK5RAP3-229ENST00000583697 LRRC37A2A6NM11 1700 aa10.37□□□□□ -0.75
CDK5RAP3-229ENST00000583697 PRDM1O75626 825 aa10.37□□□□□ -0.75
CDK5RAP3-229ENST00000583697 TTLL1O95922 423 aa10.37□□□□□ -0.75
CDK5RAP3-229ENST00000583697 IGHA2P01877 340 aa10.37□□□□□ -0.75
CDK5RAP3-229ENST00000583697 AKR1A1P14550 325 aa10.37□□□□□ -0.75
CDK5RAP3-229ENST00000583697 SLC4A3P48751 1232 aa10.37□□□□□ -0.75
CDK5RAP3-229ENST00000583697 PRAMEF19Q5SWL8 479 aa10.37□□□□□ -0.75
CDK5RAP3-229ENST00000583697 RNF180Q86T96 592 aa10.37□□□□□ -0.75
CDK5RAP3-229ENST00000583697 IFNL3Q8IZI9 196 aa10.37□□□□□ -0.75
CDK5RAP3-229ENST00000583697 LRRC47Q8N1G4 583 aaKnown RBP10.37□□□□□ -0.75
CDK5RAP3-229ENST00000583697 PRPF38AQ8NAV1 312 aaKnown RBP10.37□□□□□ -0.75
CDK5RAP3-229ENST00000583697 KIFC2Q96AC6 838 aa10.37□□□□□ -0.75
CDK5RAP3-229ENST00000583697 DDX11Q96FC9 970 aa10.37□□□□□ -0.75
CDK5RAP3-229ENST00000583697 CEP95Q96GE4 821 aa10.37□□□□□ -0.75
CDK5RAP3-229ENST00000583697 TINF2Q9BSI4 451 aa10.37□□□□□ -0.75
CDK5RAP3-229ENST00000583697 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.37□□□□□ -0.75
CDK5RAP3-229ENST00000583697 CLIP2Q9UDT6 1046 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms