RNA–Protein interactions for RNA: ENST00000582482.1

CDK5RAP3-225, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 2,455 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-225ENST00000582482 TMEM47Q9BQJ4 181 aa12.19□□□□□ -0.46
CDK5RAP3-225ENST00000582482 IRX2Q9BZI1 471 aaPredicted RBP12.19□□□□□ -0.46
CDK5RAP3-225ENST00000582482 CD209Q9NNX6 404 aa12.19□□□□□ -0.46
CDK5RAP3-225ENST00000582482 PCNTO95613 3336 aa12.19□□□□□ -0.46
CDK5RAP3-225ENST00000582482 CCDC88AQ3V6T2 1871 aa12.18□□□□□ -0.46
CDK5RAP3-225ENST00000582482 NKRFO15226 690 aaKnown RBP eCLIP12.18□□□□□ -0.46
CDK5RAP3-225ENST00000582482 ORC4O43929 436 aa12.18□□□□□ -0.46
CDK5RAP3-225ENST00000582482 TFRCP02786 760 aaKnown RBP12.18□□□□□ -0.46
CDK5RAP3-225ENST00000582482 TAL1P17542 331 aaPredicted RBP12.18□□□□□ -0.46
CDK5RAP3-225ENST00000582482 RASA1P20936 1047 aa12.18□□□□□ -0.46
CDK5RAP3-225ENST00000582482 GTF2IP78347 998 aa12.18□□□□□ -0.46
CDK5RAP3-225ENST00000582482 DHX8Q14562 1220 aaKnown RBP12.18□□□□□ -0.46
CDK5RAP3-225ENST00000582482 MFSD14BQ5SR56 506 aa12.18□□□□□ -0.46
CDK5RAP3-225ENST00000582482 LRRC47Q8N1G4 583 aaKnown RBP12.18□□□□□ -0.46
CDK5RAP3-225ENST00000582482 CCDC112Q8NEF3 446 aa12.18□□□□□ -0.46
CDK5RAP3-225ENST00000582482 ATP8A2Q9NTI2 1148 aa12.18□□□□□ -0.46
CDK5RAP3-225ENST00000582482 ARPP21Q9UBL0 812 aaPredicted RBP12.18□□□□□ -0.46
CDK5RAP3-225ENST00000582482 ADAMTSL1Q8N6G6 1762 aa12.18□□□□□ -0.46
CDK5RAP3-225ENST00000582482 TRIM49BA6NDI0 452 aa12.18□□□□□ -0.46
CDK5RAP3-225ENST00000582482 IKBKBO14920 756 aa12.18□□□□□ -0.46
CDK5RAP3-225ENST00000582482 TOP1P11387 765 aaKnown RBP12.18□□□□□ -0.46
CDK5RAP3-225ENST00000582482 PFKFB3Q16875 520 aaPredicted RBP12.18□□□□□ -0.46
CDK5RAP3-225ENST00000582482 VSTM4Q8IW00 320 aa12.18□□□□□ -0.46
CDK5RAP3-225ENST00000582482 TEX11Q8IYF3 940 aa12.18□□□□□ -0.46
CDK5RAP3-225ENST00000582482 HPS3Q969F9 1004 aa12.18□□□□□ -0.46
CDK5RAP3-225ENST00000582482 TMEM260Q9NX78 707 aa12.18□□□□□ -0.46
CDK5RAP3-225ENST00000582482 RNF225M0QZC1 329 aaPredicted RBP12.17□□□□□ -0.46
CDK5RAP3-225ENST00000582482 DDAH1O94760 285 aa12.17□□□□□ -0.46
CDK5RAP3-225ENST00000582482 ERCC3P19447 782 aa12.17□□□□□ -0.46
CDK5RAP3-225ENST00000582482 ELF2Q15723 593 aa12.17□□□□□ -0.46
CDK5RAP3-225ENST00000582482 ABL1P00519 1130 aa12.17□□□□□ -0.46
CDK5RAP3-225ENST00000582482 TMEM139Q8IV31 216 aa12.17□□□□□ -0.46
CDK5RAP3-225ENST00000582482 RBM28Q9NW13 759 aaKnown RBP12.17□□□□□ -0.46
CDK5RAP3-225ENST00000582482 DLEC1Q9Y238 1755 aa12.17□□□□□ -0.46
CDK5RAP3-225ENST00000582482 USP17L5A8MUK1 530 aa12.16□□□□□ -0.46
CDK5RAP3-225ENST00000582482 RAD21O60216 631 aa12.16□□□□□ -0.46
CDK5RAP3-225ENST00000582482 CDK8P49336 464 aa12.16□□□□□ -0.46
CDK5RAP3-225ENST00000582482 TPM4P67936 248 aa12.16□□□□□ -0.46
CDK5RAP3-225ENST00000582482 PROM2Q8N271 834 aa12.16□□□□□ -0.46
CDK5RAP3-225ENST00000582482 CEP95Q96GE4 821 aa12.16□□□□□ -0.46
CDK5RAP3-225ENST00000582482 DDX4Q9NQI0 724 aaKnown RBP12.16□□□□□ -0.46
CDK5RAP3-225ENST00000582482 DNAI1Q9UI46 699 aa12.16□□□□□ -0.46
CDK5RAP3-225ENST00000582482 FLT1P17948 1338 aa12.16□□□□□ -0.46
CDK5RAP3-225ENST00000582482 SNED1Q8TER0 1413 aa12.16□□□□□ -0.46
CDK5RAP3-225ENST00000582482 SOWAHDA6NJG2 315 aa12.16□□□□□ -0.46
CDK5RAP3-225ENST00000582482 SEMA3EO15041 775 aa12.16□□□□□ -0.46
CDK5RAP3-225ENST00000582482 CTIFO43310 598 aaKnown RBP12.16□□□□□ -0.46
CDK5RAP3-225ENST00000582482 ZNF18P17022 549 aa12.16□□□□□ -0.46
CDK5RAP3-225ENST00000582482 XBP1P17861 261 aa12.16□□□□□ -0.46
CDK5RAP3-225ENST00000582482 PMS1P54277 932 aaKnown RBP12.16□□□□□ -0.46
CDK5RAP3-225ENST00000582482 ATP2C1P98194 919 aaPredicted RBP12.16□□□□□ -0.46
CDK5RAP3-225ENST00000582482 BLIDQ8IZY5 108 aa12.16□□□□□ -0.46
CDK5RAP3-225ENST00000582482 ZNF444Q8N0Y2 327 aaPredicted RBP12.16□□□□□ -0.46
CDK5RAP3-225ENST00000582482 PDCL2Q8N4E4 241 aa12.16□□□□□ -0.46
CDK5RAP3-225ENST00000582482 CERS5Q8N5B7 392 aa12.16□□□□□ -0.46
CDK5RAP3-225ENST00000582482 EYA3Q99504 573 aa12.16□□□□□ -0.46
CDK5RAP3-225ENST00000582482 PCDHA6Q9UN73 950 aa12.16□□□□□ -0.46
CDK5RAP3-225ENST00000582482 PCDHA8Q9Y5H6 950 aa12.16□□□□□ -0.46
CDK5RAP3-225ENST00000582482 DDX60LQ5H9U9 1706 aaKnown RBP12.15□□□□□ -0.46
CDK5RAP3-225ENST00000582482 PPP1R3GB7ZBB8 358 aa12.15□□□□□ -0.46
CDK5RAP3-225ENST00000582482 SLFN14P0C7P3 912 aa12.15□□□□□ -0.46
CDK5RAP3-225ENST00000582482 JAKMIP3Q5VZ66 844 aa12.15□□□□□ -0.46
CDK5RAP3-225ENST00000582482 ZNF804AQ7Z570 1209 aa12.15□□□□□ -0.46
CDK5RAP3-225ENST00000582482 ZFPM1Q8IX07 1006 aa12.15□□□□□ -0.46
CDK5RAP3-225ENST00000582482 KLHL34Q8N239 644 aa12.15□□□□□ -0.46
CDK5RAP3-225ENST00000582482 C4orf32Q8N8J7 132 aa12.15□□□□□ -0.46
CDK5RAP3-225ENST00000582482 TBC1D16Q8TBP0 767 aa12.15□□□□□ -0.46
CDK5RAP3-225ENST00000582482 TFR2Q9UP52 801 aa12.15□□□□□ -0.46
CDK5RAP3-225ENST00000582482 NHSQ6T4R5 1651 aa12.15□□□□□ -0.46
CDK5RAP3-225ENST00000582482 SYNRGQ9UMZ2 1314 aa12.15□□□□□ -0.46
CDK5RAP3-225ENST00000582482 CDK5RAP2Q96SN8 1893 aa12.15□□□□□ -0.46
CDK5RAP3-225ENST00000582482 KLRF2D3W0D1 207 aa12.15□□□□□ -0.46
CDK5RAP3-225ENST00000582482 GSDMDP57764 484 aa12.15□□□□□ -0.46
CDK5RAP3-225ENST00000582482 RHBDL3P58872 404 aa12.15□□□□□ -0.46
CDK5RAP3-225ENST00000582482 ATP2B2Q01814 1243 aa12.15□□□□□ -0.46
CDK5RAP3-225ENST00000582482 E2F4Q16254 413 aa12.15□□□□□ -0.46
CDK5RAP3-225ENST00000582482 SBK1Q52WX2 424 aa12.15□□□□□ -0.46
CDK5RAP3-225ENST00000582482 RRAGBQ5VZM2 374 aa12.15□□□□□ -0.46
CDK5RAP3-225ENST00000582482 PDXDC2PQ6P474 469 aa12.15□□□□□ -0.46
CDK5RAP3-225ENST00000582482 APTXQ7Z2E3 356 aaKnown RBP12.15□□□□□ -0.46
CDK5RAP3-225ENST00000582482 TC2NQ8N9U0 490 aa12.15□□□□□ -0.46
CDK5RAP3-225ENST00000582482 COA7Q96BR5 231 aa12.15□□□□□ -0.46
CDK5RAP3-225ENST00000582482 WDR24Q96S15 920 aa12.15□□□□□ -0.46
CDK5RAP3-225ENST00000582482 PIGSQ96S52 555 aa12.15□□□□□ -0.46
CDK5RAP3-225ENST00000582482 VPS16Q9H269 839 aa12.15□□□□□ -0.46
CDK5RAP3-225ENST00000582482 TAB2Q9NYJ8 693 aa12.15□□□□□ -0.46
CDK5RAP3-225ENST00000582482 BIN2Q9UBW5 565 aaPredicted RBP12.15□□□□□ -0.46
CDK5RAP3-225ENST00000582482 GGA1Q9UJY5 639 aa12.15□□□□□ -0.46
CDK5RAP3-225ENST00000582482 STXBP3O00186 592 aa12.14□□□□□ -0.47
CDK5RAP3-225ENST00000582482 SLC16A2P36021 539 aa12.14□□□□□ -0.47
CDK5RAP3-225ENST00000582482 LETM2Q2VYF4 491 aa12.14□□□□□ -0.47
CDK5RAP3-225ENST00000582482 NT5DC1Q5TFE4 455 aa12.14□□□□□ -0.47
CDK5RAP3-225ENST00000582482 RASSF8Q8NHQ8 419 aa12.14□□□□□ -0.47
CDK5RAP3-225ENST00000582482 GPCPD1Q9NPB8 672 aa12.14□□□□□ -0.47
CDK5RAP3-225ENST00000582482 CEP131Q9UPN4 1083 aa12.14□□□□□ -0.47
CDK5RAP3-225ENST00000582482 NAV1Q8NEY1 1877 aa12.14□□□□□ -0.47
CDK5RAP3-225ENST00000582482 SNAP25P60880 206 aa12.14□□□□□ -0.47
CDK5RAP3-225ENST00000582482 RBL2Q08999 1139 aa12.14□□□□□ -0.47
CDK5RAP3-225ENST00000582482 ERCC6LQ2NKX8 1250 aa12.14□□□□□ -0.47
CDK5RAP3-225ENST00000582482 SH3RF1Q7Z6J0 888 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms