RNA–Protein interactions for RNA: ENST00000581598.1

CCDC42-203, Transcript of coiled-coil domain containing 42, humanhuman

TSL 4

Gene CCDC42, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-203ENST00000581598 ATP2B2Q01814 1243 aa24.98■■□□□ 1.59
CCDC42-203ENST00000581598 ZMYM1Q5SVZ6 1142 aa24.98■■□□□ 1.59
CCDC42-203ENST00000581598 OLFML2BQ68BL8 750 aa24.98■■□□□ 1.59
CCDC42-203ENST00000581598 IFNL3Q8IZI9 196 aa24.98■■□□□ 1.59
CCDC42-203ENST00000581598 FSD1Q9BTV5 496 aa24.98■■□□□ 1.59
CCDC42-203ENST00000581598 NACAP1Q9BZK3 213 aa24.98■■□□□ 1.59
CCDC42-203ENST00000581598 C11orf49Q9H6J7 331 aa24.98■■□□□ 1.59
CCDC42-203ENST00000581598 ZNFX1Q9P2E3 1918 aaKnown RBP24.98■■□□□ 1.59
CCDC42-203ENST00000581598 MYH4Q9Y623 1939 aa24.97■■□□□ 1.59
CCDC42-203ENST00000581598 SLC25A27O95847 323 aa24.97■■□□□ 1.59
CCDC42-203ENST00000581598 ADORA2AP29274 412 aa24.97■■□□□ 1.59
CCDC42-203ENST00000581598 DPP9Q86TI2 863 aa24.97■■□□□ 1.59
CCDC42-203ENST00000581598 ZBTB47Q9UFB7 747 aaPredicted RBP24.97■■□□□ 1.59
CCDC42-203ENST00000581598 IGKV6D-41A0A0C4DH26 115 aa24.96■■□□□ 1.59
CCDC42-203ENST00000581598 MSCO60682 206 aa24.96■■□□□ 1.59
CCDC42-203ENST00000581598 APPP05067 770 aa24.96■■□□□ 1.59
CCDC42-203ENST00000581598 COL6A1P12109 1028 aa24.96■■□□□ 1.59
CCDC42-203ENST00000581598 TMEM132BQ14DG7 1078 aa24.96■■□□□ 1.59
CCDC42-203ENST00000581598 SLC5A4Q9NY91 659 aa24.96■■□□□ 1.59
CCDC42-203ENST00000581598 STAP2Q9UGK3 403 aa24.96■■□□□ 1.59
CCDC42-203ENST00000581598 PPP1R9AQ9ULJ8 1098 aa24.96■■□□□ 1.59
CCDC42-203ENST00000581598 SYNPO2Q9UMS6 1093 aa24.96■■□□□ 1.59
CCDC42-203ENST00000581598 ANKRD45Q5TZF3 282 aa24.95■■□□□ 1.58
CCDC42-203ENST00000581598 EXOC6Q8TAG9 804 aa24.95■■□□□ 1.58
CCDC42-203ENST00000581598 SEC62Q99442 399 aaKnown RBP24.95■■□□□ 1.58
CCDC42-203ENST00000581598 RBM27Q9P2N5 1060 aaKnown RBP24.95■■□□□ 1.58
CCDC42-203ENST00000581598 RANBP2P49792 3224 aaKnown RBP24.95■■□□□ 1.58
CCDC42-203ENST00000581598 PLIN4Q96Q06 1357 aa24.94■■□□□ 1.58
CCDC42-203ENST00000581598 PFASO15067 1338 aa24.94■■□□□ 1.58
CCDC42-203ENST00000581598 VWA5AO00534 786 aa24.94■■□□□ 1.58
CCDC42-203ENST00000581598 PLS1Q14651 629 aa24.94■■□□□ 1.58
CCDC42-203ENST00000581598 FAM83BQ5T0W9 1011 aa24.94■■□□□ 1.58
CCDC42-203ENST00000581598 ERICH6BQ5W0A0 696 aa24.94■■□□□ 1.58
CCDC42-203ENST00000581598 NCAPG2Q86XI2 1143 aa24.94■■□□□ 1.58
CCDC42-203ENST00000581598 RIOX2Q8IUF8 465 aa24.94■■□□□ 1.58
CCDC42-203ENST00000581598 ZNF444Q8N0Y2 327 aaPredicted RBP24.94■■□□□ 1.58
CCDC42-203ENST00000581598 MKL1Q969V6 931 aa24.94■■□□□ 1.58
CCDC42-203ENST00000581598 FBXO28Q9NVF7 368 aa24.94■■□□□ 1.58
CCDC42-203ENST00000581598 DDX20Q9UHI6 824 aaKnown RBP24.94■■□□□ 1.58
CCDC42-203ENST00000581598 COBLO75128 1261 aa24.93■■□□□ 1.58
CCDC42-203ENST00000581598 CYBAP13498 195 aa24.93■■□□□ 1.58
CCDC42-203ENST00000581598 COPB2P35606 906 aa24.93■■□□□ 1.58
CCDC42-203ENST00000581598 TICAM2Q86XR7 235 aa24.93■■□□□ 1.58
CCDC42-203ENST00000581598 STK11IPQ8N1F8 1099 aa24.93■■□□□ 1.58
CCDC42-203ENST00000581598 REPS2Q8NFH8 660 aa24.93■■□□□ 1.58
CCDC42-203ENST00000581598 A0A1W2PPC1 479 aa24.92■■□□□ 1.58
CCDC42-203ENST00000581598 F5H6K3 240 aa24.92■■□□□ 1.58
CCDC42-203ENST00000581598 FCER1AP12319 257 aa24.92■■□□□ 1.58
CCDC42-203ENST00000581598 CYP2C19P33261 490 aa24.92■■□□□ 1.58
CCDC42-203ENST00000581598 PDE4BQ07343 736 aa24.92■■□□□ 1.58
CCDC42-203ENST00000581598 KLRC3Q07444 240 aa24.92■■□□□ 1.58
CCDC42-203ENST00000581598 EVI5LQ96CN4 794 aa24.92■■□□□ 1.58
CCDC42-203ENST00000581598 NAPBQ9H115 298 aa24.92■■□□□ 1.58
CCDC42-203ENST00000581598 MTMR4Q9NYA4 1195 aa24.92■■□□□ 1.58
CCDC42-203ENST00000581598 ZNF214Q9UL59 606 aaPredicted RBP24.92■■□□□ 1.58
CCDC42-203ENST00000581598 NDUFB10O96000 172 aa24.91■■□□□ 1.58
CCDC42-203ENST00000581598 SLC3A2P08195 630 aaKnown RBP24.91■■□□□ 1.58
CCDC42-203ENST00000581598 STAT3P40763 770 aa24.91■■□□□ 1.58
CCDC42-203ENST00000581598 PDE1AP54750 535 aa24.91■■□□□ 1.58
CCDC42-203ENST00000581598 TRPV1Q8NER1 839 aa24.91■■□□□ 1.58
CCDC42-203ENST00000581598 NEDD1Q8NHV4 660 aa24.91■■□□□ 1.58
CCDC42-203ENST00000581598 SLF1Q9BQI6 1058 aa24.91■■□□□ 1.58
CCDC42-203ENST00000581598 RAD21O60216 631 aa24.9■■□□□ 1.58
CCDC42-203ENST00000581598 PRDM1O75626 825 aa24.9■■□□□ 1.58
CCDC42-203ENST00000581598 PPARAQ07869 468 aa24.9■■□□□ 1.58
CCDC42-203ENST00000581598 SAMD1Q6SPF0 538 aaPredicted RBP24.9■■□□□ 1.58
CCDC42-203ENST00000581598 CEP95Q96GE4 821 aa24.9■■□□□ 1.58
CCDC42-203ENST00000581598 CLIP2Q9UDT6 1046 aa24.9■■□□□ 1.58
CCDC42-203ENST00000581598 PLXNA1Q9UIW2 1896 aa24.89■■□□□ 1.58
CCDC42-203ENST00000581598 TTLL1O95922 423 aa24.89■■□□□ 1.58
CCDC42-203ENST00000581598 CNGA1P29973 690 aa24.89■■□□□ 1.58
CCDC42-203ENST00000581598 C7orf61Q8IZ16 206 aa24.89■■□□□ 1.58
CCDC42-203ENST00000581598 GMCL1P1Q8NEA9 526 aa24.89■■□□□ 1.58
CCDC42-203ENST00000581598 MAML3Q96JK9 1138 aa24.89■■□□□ 1.58
CCDC42-203ENST00000581598 DIS3Q9Y2L1 958 aaKnown RBP24.89■■□□□ 1.58
CCDC42-203ENST00000581598 ATP2A1O14983 1001 aa24.88■■□□□ 1.57
CCDC42-203ENST00000581598 FOXP2O15409 715 aa24.88■■□□□ 1.57
CCDC42-203ENST00000581598 PRPF38AQ8NAV1 312 aaKnown RBP24.88■■□□□ 1.57
CCDC42-203ENST00000581598 MMP19Q99542 508 aa24.88■■□□□ 1.57
CCDC42-203ENST00000581598 NUP88Q99567 741 aaPredicted RBP24.88■■□□□ 1.57
CCDC42-203ENST00000581598 NRBP1Q9UHY1 535 aa24.88■■□□□ 1.57
CCDC42-203ENST00000581598 SEPT4O43236 478 aa24.87■■□□□ 1.57
CCDC42-203ENST00000581598 TSPY3P0CV98 308 aa24.87■■□□□ 1.57
CCDC42-203ENST00000581598 TSPY8P0CW00 308 aa24.87■■□□□ 1.57
CCDC42-203ENST00000581598 TEX13BQ9BXU2 312 aa24.87■■□□□ 1.57
CCDC42-203ENST00000581598 HELLSQ9NRZ9 838 aa24.87■■□□□ 1.57
CCDC42-203ENST00000581598 DNM1LO00429 736 aa24.86■■□□□ 1.57
CCDC42-203ENST00000581598 BMP8BP34820 402 aa24.86■■□□□ 1.57
CCDC42-203ENST00000581598 KCTD2Q14681 263 aa24.86■■□□□ 1.57
CCDC42-203ENST00000581598 PPP4R3BQ5MIZ7 849 aa24.86■■□□□ 1.57
CCDC42-203ENST00000581598 SMC5Q8IY18 1101 aa24.86■■□□□ 1.57
CCDC42-203ENST00000581598 GDF15Q99988 308 aa24.86■■□□□ 1.57
CCDC42-203ENST00000581598 DDX52Q9Y2R4 599 aaKnown RBP eCLIP24.86■■□□□ 1.57
CCDC42-203ENST00000581598 TFAP4Q01664 338 aa24.85■■□□□ 1.57
CCDC42-203ENST00000581598 ALX1Q15699 326 aa24.85■■□□□ 1.57
CCDC42-203ENST00000581598 ZNF792Q3KQV3 632 aa24.85■■□□□ 1.57
CCDC42-203ENST00000581598 CCDC129Q6ZRS4 1044 aa24.85■■□□□ 1.57
CCDC42-203ENST00000581598 RWDD1Q9H446 243 aaPredicted RBP24.85■■□□□ 1.57
CCDC42-203ENST00000581598 ANAPC4Q9UJX5 808 aa24.85■■□□□ 1.57
CCDC42-203ENST00000581598 FEM1BQ9UK73 627 aa24.85■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms