RNA–Protein interactions for RNA: ENST00000580875.1

SNX11-207, Transcript of sorting nexin 11, humanhuman

TSL 2

Gene SNX11, Length 704 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-207ENST00000580875 DEFB123Q8N688 67 aa24.98■■□□□ 1.59
SNX11-207ENST00000580875 LBHD1Q9BQE6 289 aaPredicted RBP24.98■■□□□ 1.59
SNX11-207ENST00000580875 ECHDC1Q9NTX5 307 aa24.98■■□□□ 1.59
SNX11-207ENST00000580875 ADAMTS5Q9UNA0 930 aa24.98■■□□□ 1.59
SNX11-207ENST00000580875 GJC2Q5T442 439 aaPredicted RBP24.97■■□□□ 1.59
SNX11-207ENST00000580875 KBTBD13C9JR72 458 aa24.96■■□□□ 1.59
SNX11-207ENST00000580875 SLC17A8Q8NDX2 589 aa24.96■■□□□ 1.59
SNX11-207ENST00000580875 MAML3Q96JK9 1138 aa24.96■■□□□ 1.59
SNX11-207ENST00000580875 STRBPQ96SI9 672 aaKnown RBP24.96■■□□□ 1.59
SNX11-207ENST00000580875 MYH7P12883 1935 aa24.96■■□□□ 1.59
SNX11-207ENST00000580875 RTP1P59025 263 aa24.95■■□□□ 1.58
SNX11-207ENST00000580875 ANO1Q5XXA6 986 aa24.95■■□□□ 1.58
SNX11-207ENST00000580875 MMP19Q99542 508 aa24.95■■□□□ 1.58
SNX11-207ENST00000580875 FBXO28Q9NVF7 368 aa24.95■■□□□ 1.58
SNX11-207ENST00000580875 PRKAG2Q9UGJ0 569 aa24.95■■□□□ 1.58
SNX11-207ENST00000580875 PPP1R9AQ9ULJ8 1098 aa24.95■■□□□ 1.58
SNX11-207ENST00000580875 COL6A3P12111 3177 aa24.95■■□□□ 1.58
SNX11-207ENST00000580875 VWA5AO00534 786 aa24.94■■□□□ 1.58
SNX11-207ENST00000580875 RAD21O60216 631 aa24.94■■□□□ 1.58
SNX11-207ENST00000580875 SBK1Q52WX2 424 aa24.94■■□□□ 1.58
SNX11-207ENST00000580875 PRAMEF19Q5SWL8 479 aa24.94■■□□□ 1.58
SNX11-207ENST00000580875 Q7L0L9 218 aa24.94■■□□□ 1.58
SNX11-207ENST00000580875 RIOX2Q8IUF8 465 aa24.94■■□□□ 1.58
SNX11-207ENST00000580875 GNL3Q9BVP2 549 aaKnown RBP eCLIP24.94■■□□□ 1.58
SNX11-207ENST00000580875 PARP14Q460N5 1801 aa24.93■■□□□ 1.58
SNX11-207ENST00000580875 GIMAP6Q6P9H5 292 aa24.93■■□□□ 1.58
SNX11-207ENST00000580875 KBTBD3Q8NAB2 608 aa24.93■■□□□ 1.58
SNX11-207ENST00000580875 GPATCH3Q96I76 525 aa24.93■■□□□ 1.58
SNX11-207ENST00000580875 NRBP1Q9UHY1 535 aa24.93■■□□□ 1.58
SNX11-207ENST00000580875 MYCNP04198 464 aaPredicted RBP24.92■■□□□ 1.58
SNX11-207ENST00000580875 COPB2P35606 906 aa24.92■■□□□ 1.58
SNX11-207ENST00000580875 STAT3P40763 770 aa24.92■■□□□ 1.58
SNX11-207ENST00000580875 KCTD2Q14681 263 aa24.92■■□□□ 1.58
SNX11-207ENST00000580875 FAM83BQ5T0W9 1011 aa24.92■■□□□ 1.58
SNX11-207ENST00000580875 SLC39A5Q6ZMH5 540 aa24.92■■□□□ 1.58
SNX11-207ENST00000580875 ATP11BQ9Y2G3 1177 aa24.92■■□□□ 1.58
SNX11-207ENST00000580875 SUPT16HQ9Y5B9 1047 aaKnown RBP24.92■■□□□ 1.58
SNX11-207ENST00000580875 GSG1L2A8MUP6 293 aa24.91■■□□□ 1.58
SNX11-207ENST00000580875 PGK2P07205 417 aa24.91■■□□□ 1.58
SNX11-207ENST00000580875 RASA1P20936 1047 aa24.91■■□□□ 1.58
SNX11-207ENST00000580875 APPBP2Q92624 585 aa24.91■■□□□ 1.58
SNX11-207ENST00000580875 MKNK2Q9HBH9 465 aa24.91■■□□□ 1.58
SNX11-207ENST00000580875 ZNF214Q9UL59 606 aaPredicted RBP24.91■■□□□ 1.58
SNX11-207ENST00000580875 DIS3Q9Y2L1 958 aaKnown RBP24.91■■□□□ 1.58
SNX11-207ENST00000580875 SNX17Q15036 470 aa24.9■■□□□ 1.58
SNX11-207ENST00000580875 LRRC41Q15345 812 aa24.9■■□□□ 1.58
SNX11-207ENST00000580875 FAM47AQ5JRC9 791 aa24.9■■□□□ 1.58
SNX11-207ENST00000580875 REPS2Q8NFH8 660 aa24.9■■□□□ 1.58
SNX11-207ENST00000580875 OSBP2Q969R2 916 aa24.9■■□□□ 1.58
SNX11-207ENST00000580875 TINF2Q9BSI4 451 aa24.9■■□□□ 1.58
SNX11-207ENST00000580875 DCTPP1Q9H773 170 aa24.9■■□□□ 1.58
SNX11-207ENST00000580875 MTMR10Q9NXD2 777 aa24.9■■□□□ 1.58
SNX11-207ENST00000580875 ROBO3Q96MS0 1386 aa24.9■■□□□ 1.58
SNX11-207ENST00000580875 MINDY4BA8MYZ0 360 aa24.89■■□□□ 1.58
SNX11-207ENST00000580875 RNF113AO15541 343 aaKnown RBP24.89■■□□□ 1.58
SNX11-207ENST00000580875 NEFLP07196 543 aa24.89■■□□□ 1.58
SNX11-207ENST00000580875 ADCYAP1R1P41586 468 aa24.89■■□□□ 1.58
SNX11-207ENST00000580875 ZNF792Q3KQV3 632 aa24.89■■□□□ 1.58
SNX11-207ENST00000580875 SLF1Q9BQI6 1058 aa24.89■■□□□ 1.58
SNX11-207ENST00000580875 NYAP2Q9P242 653 aa24.89■■□□□ 1.58
SNX11-207ENST00000580875 STXBP5LQ9Y2K9 1186 aa24.89■■□□□ 1.58
SNX11-207ENST00000580875 COL11A1P12107 1806 aaPredicted RBP24.89■■□□□ 1.57
SNX11-207ENST00000580875 ZFYP08048 801 aaPredicted RBP24.88■■□□□ 1.57
SNX11-207ENST00000580875 RARBP10826 455 aa24.88■■□□□ 1.57
SNX11-207ENST00000580875 TSHZ3Q63HK5 1081 aa24.88■■□□□ 1.57
SNX11-207ENST00000580875 STK11IPQ8N1F8 1099 aa24.88■■□□□ 1.57
SNX11-207ENST00000580875 NUP88Q99567 741 aaPredicted RBP24.88■■□□□ 1.57
SNX11-207ENST00000580875 XPNPEP3Q9NQH7 507 aa24.88■■□□□ 1.57
SNX11-207ENST00000580875 GREB1LQ9C091 1923 aaPredicted RBP24.87■■□□□ 1.57
SNX11-207ENST00000580875 F5H6K3 240 aa24.87■■□□□ 1.57
SNX11-207ENST00000580875 GNAT2P19087 354 aa24.87■■□□□ 1.57
SNX11-207ENST00000580875 KLRC3Q07444 240 aa24.87■■□□□ 1.57
SNX11-207ENST00000580875 TRIM60Q495X7 471 aa24.87■■□□□ 1.57
SNX11-207ENST00000580875 C1orf53Q5VUE5 145 aa24.87■■□□□ 1.57
SNX11-207ENST00000580875 FERMT2Q96AC1 680 aa24.87■■□□□ 1.57
SNX11-207ENST00000580875 TEX13BQ9BXU2 312 aa24.87■■□□□ 1.57
SNX11-207ENST00000580875 ZNF287Q9HBT7 754 aa24.87■■□□□ 1.57
SNX11-207ENST00000580875 PRDM5Q9NQX1 630 aaPredicted RBP24.87■■□□□ 1.57
SNX11-207ENST00000580875 GPAA1O43292 621 aa24.86■■□□□ 1.57
SNX11-207ENST00000580875 NDUFB10O96000 172 aa24.86■■□□□ 1.57
SNX11-207ENST00000580875 TDO2P48775 406 aa24.86■■□□□ 1.57
SNX11-207ENST00000580875 PHF24Q9UPV7 400 aa24.86■■□□□ 1.57
SNX11-207ENST00000580875 SNRNP48Q6IEG0 339 aaKnown RBP24.85■■□□□ 1.57
SNX11-207ENST00000580875 RNF180Q86T96 592 aa24.85■■□□□ 1.57
SNX11-207ENST00000580875 PRPF38AQ8NAV1 312 aaKnown RBP24.85■■□□□ 1.57
SNX11-207ENST00000580875 EPB41L4AQ9HCS5 686 aaPredicted RBP24.85■■□□□ 1.57
SNX11-207ENST00000580875 CNPY2Q9Y2B0 182 aa24.85■■□□□ 1.57
SNX11-207ENST00000580875 LTBP2Q14767 1821 aa24.84■■□□□ 1.57
SNX11-207ENST00000580875 IGKV6D-41A0A0C4DH26 115 aa24.84■■□□□ 1.57
SNX11-207ENST00000580875 DLL1O00548 723 aa24.84■■□□□ 1.57
SNX11-207ENST00000580875 APPP05067 770 aa24.84■■□□□ 1.57
SNX11-207ENST00000580875 ZNF865P0CJ78 1059 aaPredicted RBP24.84■■□□□ 1.57
SNX11-207ENST00000580875 AKR1A1P14550 325 aa24.84■■□□□ 1.57
SNX11-207ENST00000580875 TAL1P17542 331 aaPredicted RBP24.84■■□□□ 1.57
SNX11-207ENST00000580875 LRRFIP1Q32MZ4 808 aaKnown RBP24.84■■□□□ 1.57
SNX11-207ENST00000580875 FAM109BQ6ICB4 259 aaPredicted RBP24.84■■□□□ 1.57
SNX11-207ENST00000580875 ZNF444Q8N0Y2 327 aaPredicted RBP24.84■■□□□ 1.57
SNX11-207ENST00000580875 MSL3Q8N5Y2 521 aaKnown RBP24.84■■□□□ 1.57
SNX11-207ENST00000580875 PDLIM7Q9NR12 457 aa24.84■■□□□ 1.57
SNX11-207ENST00000580875 CLIP2Q9UDT6 1046 aa24.84■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms