RNA–Protein interactions for RNA: ENST00000580315.1

CDC42EP4-205, Transcript of CDC42 effector protein 4, humanhuman

TSL 2

Gene CDC42EP4, Length 1,022 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-205ENST00000580315 PFASO15067 1338 aa29.53■■■□□ 2.32
CDC42EP4-205ENST00000580315 CCDC171Q6TFL3 1326 aa29.53■■■□□ 2.32
CDC42EP4-205ENST00000580315 FOXP2O15409 715 aa29.53■■■□□ 2.32
CDC42EP4-205ENST00000580315 EEF2P13639 858 aaKnown RBP29.53■■■□□ 2.32
CDC42EP4-205ENST00000580315 SYN1P17600 705 aa29.53■■■□□ 2.32
CDC42EP4-205ENST00000580315 ALX1Q15699 326 aa29.53■■■□□ 2.32
CDC42EP4-205ENST00000580315 SIAH1Q8IUQ4 282 aa29.53■■■□□ 2.32
CDC42EP4-205ENST00000580315 APBA2Q99767 749 aa29.53■■■□□ 2.32
CDC42EP4-205ENST00000580315 PRDM1O75626 825 aa29.52■■■□□ 2.32
CDC42EP4-205ENST00000580315 CNMDO75829 334 aa29.52■■■□□ 2.32
CDC42EP4-205ENST00000580315 CCND3P30281 292 aaPredicted RBP29.52■■■□□ 2.32
CDC42EP4-205ENST00000580315 LHX8Q68G74 356 aa29.52■■■□□ 2.32
CDC42EP4-205ENST00000580315 VCPKMTQ9H867 229 aa29.52■■■□□ 2.32
CDC42EP4-205ENST00000580315 COL6A3P12111 3177 aa29.52■■■□□ 2.32
CDC42EP4-205ENST00000580315 MYH8P13535 1937 aa29.51■■■□□ 2.32
CDC42EP4-205ENST00000580315 COL6A1P12109 1028 aa29.51■■■□□ 2.31
CDC42EP4-205ENST00000580315 TTC22Q5TAA0 569 aa29.51■■■□□ 2.31
CDC42EP4-205ENST00000580315 TANGO6Q9C0B7 1094 aa29.51■■■□□ 2.31
CDC42EP4-205ENST00000580315 CWC22Q9HCG8 908 aaKnown RBP29.51■■■□□ 2.31
CDC42EP4-205ENST00000580315 GOPCQ9HD26 462 aa29.51■■■□□ 2.31
CDC42EP4-205ENST00000580315 MAGEA10P43363 369 aaPredicted RBP29.5■■■□□ 2.31
CDC42EP4-205ENST00000580315 CCNA1P78396 465 aa29.5■■■□□ 2.31
CDC42EP4-205ENST00000580315 MAP2K5Q13163 448 aa29.5■■■□□ 2.31
CDC42EP4-205ENST00000580315 ZNF589Q86UQ0 364 aaPredicted RBP29.5■■■□□ 2.31
CDC42EP4-205ENST00000580315 GNL3Q9BVP2 549 aaKnown RBP eCLIP29.5■■■□□ 2.31
CDC42EP4-205ENST00000580315 TSPY3P0CV98 308 aa29.49■■■□□ 2.31
CDC42EP4-205ENST00000580315 TSPY8P0CW00 308 aa29.49■■■□□ 2.31
CDC42EP4-205ENST00000580315 HSPD1P10809 573 aaKnown RBP29.49■■■□□ 2.31
CDC42EP4-205ENST00000580315 CWC27Q6UX04 472 aaKnown RBP29.49■■■□□ 2.31
CDC42EP4-205ENST00000580315 HOXC10Q9NYD6 342 aa29.49■■■□□ 2.31
CDC42EP4-205ENST00000580315 NYAP2Q9P242 653 aa29.49■■■□□ 2.31
CDC42EP4-205ENST00000580315 ZMYM6O95789 1325 aa29.48■■■□□ 2.31
CDC42EP4-205ENST00000580315 WDR46O15213 610 aaKnown RBP29.48■■■□□ 2.31
CDC42EP4-205ENST00000580315 COG2Q14746 738 aa29.48■■■□□ 2.31
CDC42EP4-205ENST00000580315 LBX2Q6XYB7 198 aa29.48■■■□□ 2.31
CDC42EP4-205ENST00000580315 SPICE1Q8N0Z3 855 aa29.48■■■□□ 2.31
CDC42EP4-205ENST00000580315 ANAPC4Q9UJX5 808 aa29.48■■■□□ 2.31
CDC42EP4-205ENST00000580315 FGAP02671 866 aa29.47■■■□□ 2.31
CDC42EP4-205ENST00000580315 CTDSPL2Q05D32 466 aa29.47■■■□□ 2.31
CDC42EP4-205ENST00000580315 SLC15A5A6NIM6 579 aa29.46■■■□□ 2.31
CDC42EP4-205ENST00000580315 RAD21O60216 631 aa29.46■■■□□ 2.31
CDC42EP4-205ENST00000580315 GSPT1P15170 499 aaKnown RBP29.46■■■□□ 2.31
CDC42EP4-205ENST00000580315 KIAA1755Q5JYT7 1200 aa29.46■■■□□ 2.31
CDC42EP4-205ENST00000580315 WDR78Q5VTH9 848 aa29.46■■■□□ 2.31
CDC42EP4-205ENST00000580315 NEDD1Q8NHV4 660 aa29.46■■■□□ 2.31
CDC42EP4-205ENST00000580315 FLRT1Q9NZU1 646 aa29.46■■■□□ 2.31
CDC42EP4-205ENST00000580315 BTBD7Q9P203 1132 aa29.46■■■□□ 2.31
CDC42EP4-205ENST00000580315 IGKV6D-41A0A0C4DH26 115 aa29.45■■■□□ 2.31
CDC42EP4-205ENST00000580315 SPDYE16A6NNV3 312 aaPredicted RBP29.45■■■□□ 2.31
CDC42EP4-205ENST00000580315 PTPREP23469 700 aa29.45■■■□□ 2.31
CDC42EP4-205ENST00000580315 TFAP4Q01664 338 aa29.45■■■□□ 2.31
CDC42EP4-205ENST00000580315 PPP4R3BQ5MIZ7 849 aa29.45■■■□□ 2.31
CDC42EP4-205ENST00000580315 GPR153Q6NV75 609 aa29.45■■■□□ 2.31
CDC42EP4-205ENST00000580315 DDX52Q9Y2R4 599 aaKnown RBP eCLIP29.45■■■□□ 2.31
CDC42EP4-205ENST00000580315 PLIN4Q96Q06 1357 aa29.44■■■□□ 2.3
CDC42EP4-205ENST00000580315 FLOT1O75955 427 aa29.44■■■□□ 2.3
CDC42EP4-205ENST00000580315 LRRC26Q2I0M4 334 aa29.44■■■□□ 2.3
CDC42EP4-205ENST00000580315 LRIT3Q3SXY7 679 aa29.44■■■□□ 2.3
CDC42EP4-205ENST00000580315 FAM47AQ5JRC9 791 aa29.44■■■□□ 2.3
CDC42EP4-205ENST00000580315 MFSD14CQ5VZR4 134 aa29.44■■■□□ 2.3
CDC42EP4-205ENST00000580315 CENPQQ7L2Z9 268 aaPredicted RBP29.44■■■□□ 2.3
CDC42EP4-205ENST00000580315 TDHQ8IZJ6 230 aa29.44■■■□□ 2.3
CDC42EP4-205ENST00000580315 SLC17A8Q8NDX2 589 aa29.44■■■□□ 2.3
CDC42EP4-205ENST00000580315 CEP95Q96GE4 821 aa29.44■■■□□ 2.3
CDC42EP4-205ENST00000580315 MTMR4Q9NYA4 1195 aa29.44■■■□□ 2.3
CDC42EP4-205ENST00000580315 CLIP2Q9UDT6 1046 aa29.44■■■□□ 2.3
CDC42EP4-205ENST00000580315 A0A0C4DFX4 3053 aa29.44■■■□□ 2.3
CDC42EP4-205ENST00000580315 TTLL1O95922 423 aa29.43■■■□□ 2.3
CDC42EP4-205ENST00000580315 UBE2OQ9C0C9 1292 aaKnown RBP29.43■■■□□ 2.3
CDC42EP4-205ENST00000580315 TSPY2A6NKD2 308 aa29.42■■■□□ 2.3
CDC42EP4-205ENST00000580315 HOXC6P09630 235 aa29.42■■■□□ 2.3
CDC42EP4-205ENST00000580315 GRB14Q14449 540 aa29.42■■■□□ 2.3
CDC42EP4-205ENST00000580315 MB21D1Q8N884 522 aa29.42■■■□□ 2.3
CDC42EP4-205ENST00000580315 SYNPO2Q9UMS6 1093 aa29.42■■■□□ 2.3
CDC42EP4-205ENST00000580315 IVNS1ABPQ9Y6Y0 642 aa29.42■■■□□ 2.3
CDC42EP4-205ENST00000580315 DNAH12Q6ZR08 3092 aa29.41■■■□□ 2.3
CDC42EP4-205ENST00000580315 ORC4O43929 436 aa29.41■■■□□ 2.3
CDC42EP4-205ENST00000580315 DSG3P32926 999 aa29.41■■■□□ 2.3
CDC42EP4-205ENST00000580315 MKL1Q969V6 931 aa29.41■■■□□ 2.3
CDC42EP4-205ENST00000580315 TOMM22Q9NS69 142 aa29.41■■■□□ 2.3
CDC42EP4-205ENST00000580315 GREB1LQ9C091 1923 aaPredicted RBP29.4■■■□□ 2.3
CDC42EP4-205ENST00000580315 RANBP6O60518 1105 aaKnown RBP29.4■■■□□ 2.3
CDC42EP4-205ENST00000580315 DEFB123Q8N688 67 aa29.4■■■□□ 2.3
CDC42EP4-205ENST00000580315 NPLOC4Q8TAT6 608 aa29.4■■■□□ 2.3
CDC42EP4-205ENST00000580315 F5H6K3 240 aa29.39■■■□□ 2.3
CDC42EP4-205ENST00000580315 FGRP09769 529 aa29.39■■■□□ 2.3
CDC42EP4-205ENST00000580315 KLRC3Q07444 240 aa29.39■■■□□ 2.3
CDC42EP4-205ENST00000580315 FAM83BQ5T0W9 1011 aa29.39■■■□□ 2.3
CDC42EP4-205ENST00000580315 SAMD1Q6SPF0 538 aaPredicted RBP29.39■■■□□ 2.3
CDC42EP4-205ENST00000580315 RUFY2Q8WXA3 655 aa29.39■■■□□ 2.3
CDC42EP4-205ENST00000580315 INCENPQ9NQS7 918 aa29.39■■■□□ 2.3
CDC42EP4-205ENST00000580315 DDX20Q9UHI6 824 aaKnown RBP29.39■■■□□ 2.3
CDC42EP4-205ENST00000580315 NEFLP07196 543 aa29.38■■■□□ 2.29
CDC42EP4-205ENST00000580315 PCP11498 1178 aaKnown RBP29.38■■■□□ 2.29
CDC42EP4-205ENST00000580315 CYP2C19P33261 490 aa29.38■■■□□ 2.29
CDC42EP4-205ENST00000580315 HAND2P61296 217 aa29.38■■■□□ 2.29
CDC42EP4-205ENST00000580315 DSCC1Q9BVC3 393 aa29.38■■■□□ 2.29
CDC42EP4-205ENST00000580315 RNF41Q9H4P4 317 aaPredicted RBP29.38■■■□□ 2.29
CDC42EP4-205ENST00000580315 ZNF213O14771 459 aa29.37■■■□□ 2.29
CDC42EP4-205ENST00000580315 MSCO60682 206 aa29.37■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms