RNA–Protein interactions for RNA: ENST00000578329.1

PPP4R1-209, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 350 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-209ENST00000578329 UNC80Q8N2C7 3258 aa5.39□□□□□ -1.55
PPP4R1-209ENST00000578329 CHD7Q9P2D1 2997 aa5.39□□□□□ -1.55
PPP4R1-209ENST00000578329 LRRC37A2A6NM11 1700 aa5.38□□□□□ -1.55
PPP4R1-209ENST00000578329 A0A1W2PPC1 479 aa5.38□□□□□ -1.55
PPP4R1-209ENST00000578329 TRIM43BA6NCK2 446 aa5.38□□□□□ -1.55
PPP4R1-209ENST00000578329 MYADML2A6NDP7 307 aa5.38□□□□□ -1.55
PPP4R1-209ENST00000578329 POTEB2H3BUK9 544 aa5.38□□□□□ -1.55
PPP4R1-209ENST00000578329 VWA5AO00534 786 aa5.38□□□□□ -1.55
PPP4R1-209ENST00000578329 SNAI1O95863 264 aaPredicted RBP5.38□□□□□ -1.55
PPP4R1-209ENST00000578329 POLR3DP05423 398 aaPredicted RBP5.38□□□□□ -1.55
PPP4R1-209ENST00000578329 IFIT2P09913 472 aaKnown RBP5.38□□□□□ -1.55
PPP4R1-209ENST00000578329 NOVP48745 357 aa5.38□□□□□ -1.55
PPP4R1-209ENST00000578329 TTF1Q15361 905 aaPredicted RBP5.38□□□□□ -1.55
PPP4R1-209ENST00000578329 LRIT3Q3SXY7 679 aa5.38□□□□□ -1.55
PPP4R1-209ENST00000578329 SBK1Q52WX2 424 aa5.38□□□□□ -1.55
PPP4R1-209ENST00000578329 FAM47AQ5JRC9 791 aa5.38□□□□□ -1.55
PPP4R1-209ENST00000578329 C9orf50Q5SZB4 431 aa5.38□□□□□ -1.55
PPP4R1-209ENST00000578329 GJC2Q5T442 439 aaPredicted RBP5.38□□□□□ -1.55
PPP4R1-209ENST00000578329 VPS53Q5VIR6 699 aa5.38□□□□□ -1.55
PPP4R1-209ENST00000578329 OLFML2BQ68BL8 750 aa5.38□□□□□ -1.55
PPP4R1-209ENST00000578329 CERS3Q8IU89 383 aa5.38□□□□□ -1.55
PPP4R1-209ENST00000578329 KBTBD3Q8NAB2 608 aa5.38□□□□□ -1.55
PPP4R1-209ENST00000578329 SHCBP1Q8NEM2 672 aa5.38□□□□□ -1.55
PPP4R1-209ENST00000578329 TRIM43Q96BQ3 446 aaPredicted RBP5.38□□□□□ -1.55
PPP4R1-209ENST00000578329 MAML3Q96JK9 1138 aa5.38□□□□□ -1.55
PPP4R1-209ENST00000578329 GUCD1Q96NT3 240 aa5.38□□□□□ -1.55
PPP4R1-209ENST00000578329 FEZ1Q99689 392 aa5.38□□□□□ -1.55
PPP4R1-209ENST00000578329 NOL10Q9BSC4 688 aaKnown RBP5.38□□□□□ -1.55
PPP4R1-209ENST00000578329 IL17RBQ9NRM6 502 aa5.38□□□□□ -1.55
PPP4R1-209ENST00000578329 ATP8A2Q9NTI2 1148 aa5.38□□□□□ -1.55
PPP4R1-209ENST00000578329 ECHDC1Q9NTX5 307 aa5.38□□□□□ -1.55
PPP4R1-209ENST00000578329 MTMR10Q9NXD2 777 aa5.38□□□□□ -1.55
PPP4R1-209ENST00000578329 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.38□□□□□ -1.55
PPP4R1-209ENST00000578329 SLC4A4Q9Y6R1 1079 aa5.38□□□□□ -1.55
PPP4R1-209ENST00000578329 CDH23Q9H251 3354 aa5.38□□□□□ -1.55
PPP4R1-209ENST00000578329 ZNF536O15090 1300 aa5.38□□□□□ -1.55
PPP4R1-209ENST00000578329 REV3LO60673 3130 aa5.37□□□□□ -1.55
PPP4R1-209ENST00000578329 TTC28Q96AY4 2481 aa5.37□□□□□ -1.55
PPP4R1-209ENST00000578329 MYH4Q9Y623 1939 aa5.37□□□□□ -1.55
PPP4R1-209ENST00000578329 GPAA1O43292 621 aa5.37□□□□□ -1.55
PPP4R1-209ENST00000578329 NMT2O60551 498 aa5.37□□□□□ -1.55
PPP4R1-209ENST00000578329 ADAMTS4O75173 837 aa5.37□□□□□ -1.55
PPP4R1-209ENST00000578329 PRDM1O75626 825 aa5.37□□□□□ -1.55
PPP4R1-209ENST00000578329 NDUFB10O96000 172 aa5.37□□□□□ -1.55
PPP4R1-209ENST00000578329 ATN1P54259 1190 aaPredicted RBP5.37□□□□□ -1.55
PPP4R1-209ENST00000578329 USP14P54578 494 aa5.37□□□□□ -1.55
PPP4R1-209ENST00000578329 MDM2Q00987 491 aaPredicted RBP5.37□□□□□ -1.55
PPP4R1-209ENST00000578329 ICA1Q05084 483 aa5.37□□□□□ -1.55
PPP4R1-209ENST00000578329 LRRC41Q15345 812 aa5.37□□□□□ -1.55
PPP4R1-209ENST00000578329 HSP90AB4PQ58FF6 505 aa5.37□□□□□ -1.55
PPP4R1-209ENST00000578329 ZMYM1Q5SVZ6 1142 aa5.37□□□□□ -1.55
PPP4R1-209ENST00000578329 FAM83BQ5T0W9 1011 aa5.37□□□□□ -1.55
PPP4R1-209ENST00000578329 CCDC129Q6ZRS4 1044 aa5.37□□□□□ -1.55
PPP4R1-209ENST00000578329 DHX30Q7L2E3 1194 aaKnown RBP eCLIP5.37□□□□□ -1.55
PPP4R1-209ENST00000578329 RIOX2Q8IUF8 465 aa5.37□□□□□ -1.55
PPP4R1-209ENST00000578329 STK11IPQ8N1F8 1099 aa5.37□□□□□ -1.55
PPP4R1-209ENST00000578329 GTF3C2Q8WUA4 911 aaPredicted RBP5.37□□□□□ -1.55
PPP4R1-209ENST00000578329 LPAR1Q92633 364 aa5.37□□□□□ -1.55
PPP4R1-209ENST00000578329 MKL1Q969V6 931 aa5.37□□□□□ -1.55
PPP4R1-209ENST00000578329 PURBQ96QR8 312 aaKnown RBP5.37□□□□□ -1.55
PPP4R1-209ENST00000578329 LRRCC1Q9C099 1032 aa5.37□□□□□ -1.55
PPP4R1-209ENST00000578329 TANGO6Q9C0B7 1094 aa5.37□□□□□ -1.55
PPP4R1-209ENST00000578329 BCL11AQ9H165 835 aa5.37□□□□□ -1.55
PPP4R1-209ENST00000578329 PDLIM7Q9NR12 457 aa5.37□□□□□ -1.55
PPP4R1-209ENST00000578329 SWAP70Q9UH65 585 aa5.37□□□□□ -1.55
PPP4R1-209ENST00000578329 PPP1R9AQ9ULJ8 1098 aa5.37□□□□□ -1.55
PPP4R1-209ENST00000578329 NR2E3Q9Y5X4 410 aa5.37□□□□□ -1.55
PPP4R1-209ENST00000578329 PLIN4Q96Q06 1357 aa5.37□□□□□ -1.55
PPP4R1-209ENST00000578329 F5H6K3 240 aa5.36□□□□□ -1.55
PPP4R1-209ENST00000578329 DNM1LO00429 736 aa5.36□□□□□ -1.55
PPP4R1-209ENST00000578329 MPHOSPH10O00566 681 aaKnown RBP5.36□□□□□ -1.55
PPP4R1-209ENST00000578329 WDR46O15213 610 aaKnown RBP5.36□□□□□ -1.55
PPP4R1-209ENST00000578329 RNF113AO15541 343 aaKnown RBP5.36□□□□□ -1.55
PPP4R1-209ENST00000578329 SEPT4O43236 478 aa5.36□□□□□ -1.55
PPP4R1-209ENST00000578329 FLOT1O75955 427 aa5.36□□□□□ -1.55
PPP4R1-209ENST00000578329 FGRP09769 529 aa5.36□□□□□ -1.55
PPP4R1-209ENST00000578329 CAPN2P17655 700 aa5.36□□□□□ -1.55
PPP4R1-209ENST00000578329 RTP1P59025 263 aa5.36□□□□□ -1.55
PPP4R1-209ENST00000578329 KLRC3Q07444 240 aa5.36□□□□□ -1.55
PPP4R1-209ENST00000578329 SHHQ15465 462 aa5.36□□□□□ -1.55
PPP4R1-209ENST00000578329 TRIM60Q495X7 471 aa5.36□□□□□ -1.55
PPP4R1-209ENST00000578329 FAM109BQ6ICB4 259 aaPredicted RBP5.36□□□□□ -1.55
PPP4R1-209ENST00000578329 MAMDC4Q6UXC1 1216 aa5.36□□□□□ -1.55
PPP4R1-209ENST00000578329 SLC39A5Q6ZMH5 540 aa5.36□□□□□ -1.55
PPP4R1-209ENST00000578329 C16orf59Q7L2K0 433 aa5.36□□□□□ -1.55
PPP4R1-209ENST00000578329 TRMT44Q8IYL2 757 aaKnown RBP5.36□□□□□ -1.55
PPP4R1-209ENST00000578329 IFNL3Q8IZI9 196 aa5.36□□□□□ -1.55
PPP4R1-209ENST00000578329 ABRAQ8N0Z2 381 aa5.36□□□□□ -1.55
PPP4R1-209ENST00000578329 KLHDC9Q8NEP7 349 aa5.36□□□□□ -1.55
PPP4R1-209ENST00000578329 APPBP2Q92624 585 aa5.36□□□□□ -1.55
PPP4R1-209ENST00000578329 CEP95Q96GE4 821 aa5.36□□□□□ -1.55
PPP4R1-209ENST00000578329 CCDC17Q96LX7 622 aa5.36□□□□□ -1.55
PPP4R1-209ENST00000578329 SENP6Q9GZR1 1112 aaPredicted RBP5.36□□□□□ -1.55
PPP4R1-209ENST00000578329 IL25Q9H293 177 aa5.36□□□□□ -1.55
PPP4R1-209ENST00000578329 TTYH1Q9H313 450 aaPredicted RBP5.36□□□□□ -1.55
PPP4R1-209ENST00000578329 KANSL2Q9H9L4 492 aa5.36□□□□□ -1.55
PPP4R1-209ENST00000578329 CABP5Q9NP86 173 aa5.36□□□□□ -1.55
PPP4R1-209ENST00000578329 MTMR4Q9NYA4 1195 aa5.36□□□□□ -1.55
PPP4R1-209ENST00000578329 HOXC10Q9NYD6 342 aa5.36□□□□□ -1.55
PPP4R1-209ENST00000578329 NYAP2Q9P242 653 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms