RNA–Protein interactions for RNA: ENST00000578105.1

SKA2-203, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-203ENST00000578105 FKBP1AP62942 108 aaKnown RBP9.44□□□□□ -0.9
SKA2-203ENST00000578105 MYL5Q02045 173 aa9.44□□□□□ -0.9
SKA2-203ENST00000578105 C16orf86Q6ZW13 317 aa9.44□□□□□ -0.9
SKA2-203ENST00000578105 MAP7D2Q96T17 732 aa9.44□□□□□ -0.9
SKA2-203ENST00000578105 RTFDC1Q9BY42 306 aaPredicted RBP9.44□□□□□ -0.9
SKA2-203ENST00000578105 MKNK2Q9HBH9 465 aa9.44□□□□□ -0.9
SKA2-203ENST00000578105 PLIN4Q96Q06 1357 aa9.44□□□□□ -0.9
SKA2-203ENST00000578105 QSER1Q2KHR3 1735 aa9.44□□□□□ -0.9
SKA2-203ENST00000578105 DDX60LQ5H9U9 1706 aaKnown RBP9.44□□□□□ -0.9
SKA2-203ENST00000578105 DYNC1I1O14576 645 aa9.43□□□□□ -0.9
SKA2-203ENST00000578105 MYL1P05976 194 aa9.43□□□□□ -0.9
SKA2-203ENST00000578105 TSPY3P0CV98 308 aa9.43□□□□□ -0.9
SKA2-203ENST00000578105 TSPY8P0CW00 308 aa9.43□□□□□ -0.9
SKA2-203ENST00000578105 NPR1P16066 1061 aa9.43□□□□□ -0.9
SKA2-203ENST00000578105 ERCC5P28715 1186 aaPredicted RBP9.43□□□□□ -0.9
SKA2-203ENST00000578105 GUCY1A2P33402 732 aa9.43□□□□□ -0.9
SKA2-203ENST00000578105 PDE6BP35913 854 aa9.43□□□□□ -0.9
SKA2-203ENST00000578105 SARSP49591 514 aaKnown RBP9.43□□□□□ -0.9
SKA2-203ENST00000578105 GPSM2P81274 684 aa9.43□□□□□ -0.9
SKA2-203ENST00000578105 TFAP4Q01664 338 aa9.43□□□□□ -0.9
SKA2-203ENST00000578105 POSTNQ15063 836 aa9.43□□□□□ -0.9
SKA2-203ENST00000578105 RCSD1Q6JBY9 416 aa9.43□□□□□ -0.9
SKA2-203ENST00000578105 CCDC186Q7Z3E2 898 aa9.43□□□□□ -0.9
SKA2-203ENST00000578105 TXNRD3Q86VQ6 643 aa9.43□□□□□ -0.9
SKA2-203ENST00000578105 STK11IPQ8N1F8 1099 aa9.43□□□□□ -0.9
SKA2-203ENST00000578105 AOPEPQ8N6M6 819 aa9.43□□□□□ -0.9
SKA2-203ENST00000578105 PNMA1Q8ND90 353 aa9.43□□□□□ -0.9
SKA2-203ENST00000578105 NEDD1Q8NHV4 660 aa9.43□□□□□ -0.9
SKA2-203ENST00000578105 SPATA20Q8TB22 786 aa9.43□□□□□ -0.9
SKA2-203ENST00000578105 TNFRSF25Q93038 417 aa9.43□□□□□ -0.9
SKA2-203ENST00000578105 EYA3Q99504 573 aa9.43□□□□□ -0.9
SKA2-203ENST00000578105 MRIQ9BWK5 157 aa9.43□□□□□ -0.9
SKA2-203ENST00000578105 SPZ1Q9BXG8 430 aa9.43□□□□□ -0.9
SKA2-203ENST00000578105 TTC12Q9H892 705 aaPredicted RBP9.43□□□□□ -0.9
SKA2-203ENST00000578105 GJB4Q9NTQ9 266 aa9.43□□□□□ -0.9
SKA2-203ENST00000578105 KCNJ14Q9UNX9 436 aa9.43□□□□□ -0.9
SKA2-203ENST00000578105 ATP6V0A2Q9Y487 856 aa9.43□□□□□ -0.9
SKA2-203ENST00000578105 V9GY48 417 aaPredicted RBP9.43□□□□□ -0.9
SKA2-203ENST00000578105 FOCADQ5VW36 1801 aa9.42□□□□□ -0.9
SKA2-203ENST00000578105 PPEF1O14829 653 aaPredicted RBP9.42□□□□□ -0.9
SKA2-203ENST00000578105 PPFIA3O75145 1194 aa9.42□□□□□ -0.9
SKA2-203ENST00000578105 SLFN14P0C7P3 912 aa9.42□□□□□ -0.9
SKA2-203ENST00000578105 HSPA1LP34931 641 aa9.42□□□□□ -0.9
SKA2-203ENST00000578105 GTF2F1P35269 517 aaKnown RBP eCLIP9.42□□□□□ -0.91e-8■■■■■ 31.9
SKA2-203ENST00000578105 LONP1P36776 959 aaKnown RBP9.42□□□□□ -0.9
SKA2-203ENST00000578105 TXLNAP40222 546 aa9.42□□□□□ -0.9
SKA2-203ENST00000578105 NLRP5P59047 1200 aa9.42□□□□□ -0.9
SKA2-203ENST00000578105 ATP2C1P98194 919 aaPredicted RBP9.42□□□□□ -0.9
SKA2-203ENST00000578105 MDM2Q00987 491 aaPredicted RBP9.42□□□□□ -0.9
SKA2-203ENST00000578105 TXNRD1Q16881 649 aa9.42□□□□□ -0.9
SKA2-203ENST00000578105 DPCR1Q3MIW9 517 aa9.42□□□□□ -0.9
SKA2-203ENST00000578105 DNTTIP2Q5QJE6 756 aaKnown RBP9.42□□□□□ -0.9
SKA2-203ENST00000578105 TTC38Q5R3I4 469 aa9.42□□□□□ -0.9
SKA2-203ENST00000578105 ZNF772Q68DY9 489 aaPredicted RBP9.42□□□□□ -0.9
SKA2-203ENST00000578105 AMIGO3Q86WK7 504 aa9.42□□□□□ -0.9
SKA2-203ENST00000578105 LRRC8AQ8IWT6 810 aa9.42□□□□□ -0.9
SKA2-203ENST00000578105 SRBD1Q8N5C6 995 aaKnown RBP9.42□□□□□ -0.9
SKA2-203ENST00000578105 CCDC112Q8NEF3 446 aa9.42□□□□□ -0.9
SKA2-203ENST00000578105 TBC1D16Q8TBP0 767 aa9.42□□□□□ -0.9
SKA2-203ENST00000578105 ENOX1Q8TC92 643 aaKnown RBP9.42□□□□□ -0.9
SKA2-203ENST00000578105 SMARCE1Q969G3 411 aa9.42□□□□□ -0.9
SKA2-203ENST00000578105 GSDMAQ96QA5 445 aa9.42□□□□□ -0.9
SKA2-203ENST00000578105 MAGEF1Q9HAY2 307 aa9.42□□□□□ -0.9
SKA2-203ENST00000578105 CABP5Q9NP86 173 aa9.42□□□□□ -0.9
SKA2-203ENST00000578105 SWAP70Q9UH65 585 aa9.42□□□□□ -0.9
SKA2-203ENST00000578105 PCDHA4Q9UN74 947 aa9.42□□□□□ -0.9
SKA2-203ENST00000578105 CYP2D7A0A087X1C5 515 aa9.41□□□□□ -0.9
SKA2-203ENST00000578105 ESYT2A0FGR8 921 aa9.41□□□□□ -0.9
SKA2-203ENST00000578105 PLEKHA8P1O95397 391 aa9.41□□□□□ -0.9
SKA2-203ENST00000578105 TOP1P11387 765 aaKnown RBP9.41□□□□□ -0.9
SKA2-203ENST00000578105 PTGS1P23219 599 aa9.41□□□□□ -0.9
SKA2-203ENST00000578105 GNA11P29992 359 aa9.41□□□□□ -0.9
SKA2-203ENST00000578105 PRPHP41219 470 aa9.41□□□□□ -0.9
SKA2-203ENST00000578105 BTDP43251 543 aa9.41□□□□□ -0.9
SKA2-203ENST00000578105 HDLBPQ00341 1268 aaKnown RBP9.41□□□□□ -0.9
SKA2-203ENST00000578105 NR5A1Q13285 461 aa9.41□□□□□ -0.9
SKA2-203ENST00000578105 NCAPHQ15003 741 aa9.41□□□□□ -0.9
SKA2-203ENST00000578105 GRIPAP1Q4V328 841 aa9.41□□□□□ -0.9
SKA2-203ENST00000578105 MFSD14BQ5SR56 506 aa9.41□□□□□ -0.9
SKA2-203ENST00000578105 METTL16Q86W50 562 aaKnown RBP9.41□□□□□ -0.9
SKA2-203ENST00000578105 TEX11Q8IYF3 940 aa9.41□□□□□ -0.9
SKA2-203ENST00000578105 BLIDQ8IZY5 108 aa9.41□□□□□ -0.9
SKA2-203ENST00000578105 IQUBQ8NA54 791 aa9.41□□□□□ -0.9
SKA2-203ENST00000578105 SPC24Q8NBT2 197 aa9.41□□□□□ -0.9
SKA2-203ENST00000578105 MYRIPQ8NFW9 859 aa9.41□□□□□ -0.9
SKA2-203ENST00000578105 SH3RF3Q8TEJ3 882 aaPredicted RBP9.41□□□□□ -0.9
SKA2-203ENST00000578105 KCNF1Q9H3M0 494 aa9.41□□□□□ -0.9
SKA2-203ENST00000578105 VPS54Q9P1Q0 977 aa9.41□□□□□ -0.9
SKA2-203ENST00000578105 PAXBP1Q9Y5B6 917 aa9.41□□□□□ -0.9
SKA2-203ENST00000578105 PCDHB6Q9Y5E3 794 aa9.41□□□□□ -0.9
SKA2-203ENST00000578105 PALM3A6NDB9 673 aaPredicted RBP9.4□□□□□ -0.9
SKA2-203ENST00000578105 WTIPA6NIX2 430 aaPredicted RBP9.4□□□□□ -0.9
SKA2-203ENST00000578105 ACTN4O43707 911 aaKnown RBP9.4□□□□□ -0.9
SKA2-203ENST00000578105 PRDM1O75626 825 aa9.4□□□□□ -0.9
SKA2-203ENST00000578105 USP17L8P0C7I0 530 aa9.4□□□□□ -0.9
SKA2-203ENST00000578105 RASA1P20936 1047 aa9.4□□□□□ -0.9
SKA2-203ENST00000578105 PPP1R2P41236 205 aa9.4□□□□□ -0.9
SKA2-203ENST00000578105 MORC3Q14149 939 aa9.4□□□□□ -0.9
SKA2-203ENST00000578105 NPY5RQ15761 445 aa9.4□□□□□ -0.9
SKA2-203ENST00000578105 LONRF3Q496Y0 759 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms