RNA–Protein interactions for RNA: ENST00000576616.5

SLC12A4-219, Transcript of solute carrier family 12 member 4, humanhuman

TSL 2 BASIC

Gene SLC12A4, Length 3,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC12A4-219ENST00000576616 ZSCAN29Q8IWY8 852 aaPredicted RBP12.74□□□□□ -0.37
SLC12A4-219ENST00000576616 ZNF622Q969S3 477 aaKnown RBP eCLIP12.74□□□□□ -0.372e-6■■□□□ 11.7
SLC12A4-219ENST00000576616 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.74□□□□□ -0.373e-6■□□□□ 8.8
SLC12A4-219ENST00000576616 TPM1P09493 284 aa12.74□□□□□ -0.37
SLC12A4-219ENST00000576616 PFKFB3Q16875 520 aaPredicted RBP12.74□□□□□ -0.37
SLC12A4-219ENST00000576616 JAKMIP3Q5VZ66 844 aa12.74□□□□□ -0.37
SLC12A4-219ENST00000576616 SHISA4Q96DD7 197 aa12.74□□□□□ -0.37
SLC12A4-219ENST00000576616 TMEM47Q9BQJ4 181 aa12.74□□□□□ -0.37
SLC12A4-219ENST00000576616 OSBPL5Q9H0X9 879 aaPredicted RBP12.74□□□□□ -0.37
SLC12A4-219ENST00000576616 FRMPD2Q68DX3 1309 aaPredicted RBP12.73□□□□□ -0.37
SLC12A4-219ENST00000576616 MYH2Q9UKX2 1941 aa12.73□□□□□ -0.37
SLC12A4-219ENST00000576616 A0A087X0B3 334 aa12.73□□□□□ -0.37
SLC12A4-219ENST00000576616 N4BP3O15049 544 aa12.73□□□□□ -0.37
SLC12A4-219ENST00000576616 PARP1P09874 1014 aaKnown RBP12.73□□□□□ -0.37
SLC12A4-219ENST00000576616 ZNF215Q9UL58 517 aaPredicted RBP12.73□□□□□ -0.37
SLC12A4-219ENST00000576616 ZNF579Q8NAF0 562 aaKnown RBP12.73□□□□□ -0.37
SLC12A4-219ENST00000576616 MNS1Q8NEH6 495 aa12.73□□□□□ -0.37
SLC12A4-219ENST00000576616 BAG1Q99933 345 aaPredicted RBP12.73□□□□□ -0.37
SLC12A4-219ENST00000576616 VPS16Q9H269 839 aa12.73□□□□□ -0.37
SLC12A4-219ENST00000576616 GPCPD1Q9NPB8 672 aa12.73□□□□□ -0.37
SLC12A4-219ENST00000576616 IL17RBQ9NRM6 502 aa12.73□□□□□ -0.37
SLC12A4-219ENST00000576616 SYNRGQ9UMZ2 1314 aa12.73□□□□□ -0.37
SLC12A4-219ENST00000576616 PP2D1A8MPX8 630 aa12.73□□□□□ -0.37
SLC12A4-219ENST00000576616 CLGNO14967 610 aa12.73□□□□□ -0.37
SLC12A4-219ENST00000576616 ACTN4O43707 911 aaKnown RBP12.73□□□□□ -0.37
SLC12A4-219ENST00000576616 CDK8P49336 464 aa12.73□□□□□ -0.37
SLC12A4-219ENST00000576616 FUT2Q10981 343 aa12.73□□□□□ -0.37
SLC12A4-219ENST00000576616 MSL1Q68DK7 614 aa12.73□□□□□ -0.37
SLC12A4-219ENST00000576616 DGKHQ86XP1 1220 aa12.73□□□□□ -0.37
SLC12A4-219ENST00000576616 CCDC148Q8NFR7 591 aa12.73□□□□□ -0.37
SLC12A4-219ENST00000576616 PPP1R13BQ96KQ4 1090 aa12.73□□□□□ -0.37
SLC12A4-219ENST00000576616 PCMTD1Q96MG8 357 aaPredicted RBP12.73□□□□□ -0.37
SLC12A4-219ENST00000576616 ATP2B4P23634 1241 aa12.72□□□□□ -0.37
SLC12A4-219ENST00000576616 E4F1Q66K89 784 aaPredicted RBP12.72□□□□□ -0.37
SLC12A4-219ENST00000576616 SLF2Q8IX21 1173 aa12.72□□□□□ -0.37
SLC12A4-219ENST00000576616 LRRC47Q8N1G4 583 aaKnown RBP12.72□□□□□ -0.37
SLC12A4-219ENST00000576616 BAZ2AQ9UIF9 1905 aaKnown RBP12.72□□□□□ -0.37
SLC12A4-219ENST00000576616 PHLPP1O60346 1717 aa12.72□□□□□ -0.37
SLC12A4-219ENST00000576616 ADAMTS3O15072 1205 aa12.72□□□□□ -0.37
SLC12A4-219ENST00000576616 CCNT1O60563 726 aaKnown RBP12.72□□□□□ -0.37
SLC12A4-219ENST00000576616 SBK1Q52WX2 424 aa12.72□□□□□ -0.37
SLC12A4-219ENST00000576616 RCSD1Q6JBY9 416 aa12.72□□□□□ -0.37
SLC12A4-219ENST00000576616 DEFB132Q7Z7B7 95 aa12.72□□□□□ -0.37
SLC12A4-219ENST00000576616 VSTM4Q8IW00 320 aa12.72□□□□□ -0.37
SLC12A4-219ENST00000576616 DESI2Q9BSY9 194 aa12.72□□□□□ -0.37
SLC12A4-219ENST00000576616 BIN2Q9UBW5 565 aaPredicted RBP12.72□□□□□ -0.37
SLC12A4-219ENST00000576616 COL16A1Q07092 1604 aaPredicted RBP12.72□□□□□ -0.37
SLC12A4-219ENST00000576616 GNG11P61952 73 aa12.72□□□□□ -0.37
SLC12A4-219ENST00000576616 CCDC96Q2M329 555 aa12.72□□□□□ -0.37
SLC12A4-219ENST00000576616 SPECC1LQ69YQ0 1117 aa12.72□□□□□ -0.37
SLC12A4-219ENST00000576616 RRP36Q96EU6 259 aaKnown RBP12.72□□□□□ -0.37
SLC12A4-219ENST00000576616 EN1Q05925 392 aaPredicted RBP12.71□□□□□ -0.37
SLC12A4-219ENST00000576616 MORC3Q14149 939 aa12.71□□□□□ -0.37
SLC12A4-219ENST00000576616 CLEC10AQ8IUN9 316 aa12.71□□□□□ -0.37
SLC12A4-219ENST00000576616 FNBP4Q8N3X1 1017 aaPredicted RBP12.71□□□□□ -0.37
SLC12A4-219ENST00000576616 MXD3Q9BW11 206 aa12.71□□□□□ -0.37
SLC12A4-219ENST00000576616 TCP11L1Q9NUJ3 509 aa12.71□□□□□ -0.37
SLC12A4-219ENST00000576616 PCDHA4Q9UN74 947 aa12.71□□□□□ -0.37
SLC12A4-219ENST00000576616 TTF2Q9UNY4 1162 aaKnown RBP12.71□□□□□ -0.37
SLC12A4-219ENST00000576616 SMCO2A6NFE2 343 aa12.71□□□□□ -0.37
SLC12A4-219ENST00000576616 KIF2AO00139 706 aaPredicted RBP12.71□□□□□ -0.37
SLC12A4-219ENST00000576616 CCP110O43303 1012 aa12.71□□□□□ -0.37
SLC12A4-219ENST00000576616 ZSCAN12O43309 604 aa12.71□□□□□ -0.37
SLC12A4-219ENST00000576616 MDM2Q00987 491 aaPredicted RBP12.71□□□□□ -0.37
SLC12A4-219ENST00000576616 CUL4BQ13620 913 aa12.71□□□□□ -0.37
SLC12A4-219ENST00000576616 IGSF22Q8N9C0 903 aa12.71□□□□□ -0.37
SLC12A4-219ENST00000576616 ENOX1Q8TC92 643 aaKnown RBP12.71□□□□□ -0.37
SLC12A4-219ENST00000576616 TRIM34Q9BYJ4 488 aa12.71□□□□□ -0.37
SLC12A4-219ENST00000576616 GYS1P13807 737 aa12.71□□□□□ -0.38
SLC12A4-219ENST00000576616 PLCG2P16885 1265 aa12.71□□□□□ -0.38
SLC12A4-219ENST00000576616 IKQ13123 557 aaPredicted RBP12.71□□□□□ -0.38
SLC12A4-219ENST00000576616 CCDC178Q5BJE1 867 aa12.71□□□□□ -0.38
SLC12A4-219ENST00000576616 POTEAQ6S8J7 498 aa12.71□□□□□ -0.38
SLC12A4-219ENST00000576616 ZNF710Q8N1W2 664 aa12.71□□□□□ -0.38
SLC12A4-219ENST00000576616 TEX33O43247 280 aa12.7□□□□□ -0.38
SLC12A4-219ENST00000576616 TCP10Q12799 353 aa12.7□□□□□ -0.38
SLC12A4-219ENST00000576616 WWC2Q6AWC2 1192 aa12.7□□□□□ -0.38
SLC12A4-219ENST00000576616 TRIML1Q8N9V2 468 aa12.7□□□□□ -0.38
SLC12A4-219ENST00000576616 NUP88Q99567 741 aaPredicted RBP12.7□□□□□ -0.38
SLC12A4-219ENST00000576616 LZTFL1Q9NQ48 299 aa12.7□□□□□ -0.38
SLC12A4-219ENST00000576616 ANKRD36CQ5JPF3 1778 aa12.7□□□□□ -0.38
SLC12A4-219ENST00000576616 CEP95Q96GE4 821 aa12.7□□□□□ -0.38
SLC12A4-219ENST00000576616 CDK5RAP3Q96JB5 506 aa12.7□□□□□ -0.38
SLC12A4-219ENST00000576616 PIGSQ96S52 555 aa12.7□□□□□ -0.38
SLC12A4-219ENST00000576616 C6orf50Q9HD87 102 aa12.7□□□□□ -0.38
SLC12A4-219ENST00000576616 TAB2Q9NYJ8 693 aa12.7□□□□□ -0.38
SLC12A4-219ENST00000576616 POLLQ9UGP5 575 aa12.7□□□□□ -0.38
SLC12A4-219ENST00000576616 FAM205AQ6ZU69 1335 aa12.7□□□□□ -0.38
SLC12A4-219ENST00000576616 BCL9LQ86UU0 1499 aa12.7□□□□□ -0.38
SLC12A4-219ENST00000576616 SSBP05455 408 aaKnown RBP eCLIP12.7□□□□□ -0.38
SLC12A4-219ENST00000576616 RASA1P20936 1047 aa12.7□□□□□ -0.38
SLC12A4-219ENST00000576616 ATP2C1P98194 919 aaPredicted RBP12.7□□□□□ -0.38
SLC12A4-219ENST00000576616 CCDC47Q96A33 483 aaKnown RBP12.7□□□□□ -0.38
SLC12A4-219ENST00000576616 COL4A1P02462 1669 aa12.69□□□□□ -0.38
SLC12A4-219ENST00000576616 IGSF3O75054 1194 aa12.69□□□□□ -0.38
SLC12A4-219ENST00000576616 BBOX1O75936 387 aa12.69□□□□□ -0.38
SLC12A4-219ENST00000576616 SLU7O95391 586 aaKnown RBP12.69□□□□□ -0.38
SLC12A4-219ENST00000576616 TXKP42681 527 aa12.69□□□□□ -0.38
SLC12A4-219ENST00000576616 ELF2Q15723 593 aa12.69□□□□□ -0.38
SLC12A4-219ENST00000576616 SPATA1Q5VX52 437 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms