RNA–Protein interactions for RNA: ENST00000573325.1

ABR-220, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 3

Gene ABR, Length 471 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-220ENST00000573325 TRIM43BA6NCK2 446 aa13.25□□□□□ -0.29
ABR-220ENST00000573325 APBB1O00213 710 aa13.25□□□□□ -0.29
ABR-220ENST00000573325 VWA5AO00534 786 aa13.25□□□□□ -0.29
ABR-220ENST00000573325 WDR46O15213 610 aaKnown RBP13.25□□□□□ -0.29
ABR-220ENST00000573325 FOXP2O15409 715 aa13.25□□□□□ -0.29
ABR-220ENST00000573325 SMARCA5O60264 1052 aaPredicted RBP13.25□□□□□ -0.29
ABR-220ENST00000573325 TAL1P17542 331 aaPredicted RBP13.25□□□□□ -0.29
ABR-220ENST00000573325 RASA1P20936 1047 aa13.25□□□□□ -0.29
ABR-220ENST00000573325 RTP1P59025 263 aa13.25□□□□□ -0.29
ABR-220ENST00000573325 ICA1Q05084 483 aa13.25□□□□□ -0.29
ABR-220ENST00000573325 SBK1Q52WX2 424 aa13.25□□□□□ -0.29
ABR-220ENST00000573325 GJC2Q5T442 439 aaPredicted RBP13.25□□□□□ -0.29
ABR-220ENST00000573325 CCSAPQ6IQ19 270 aaPredicted RBP13.25□□□□□ -0.29
ABR-220ENST00000573325 SLC39A5Q6ZMH5 540 aa13.25□□□□□ -0.29
ABR-220ENST00000573325 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.25□□□□□ -0.29
ABR-220ENST00000573325 SH3RF1Q7Z6J0 888 aa13.25□□□□□ -0.29
ABR-220ENST00000573325 OSBP2Q969R2 916 aa13.25□□□□□ -0.29
ABR-220ENST00000573325 TRIM43Q96BQ3 446 aaPredicted RBP13.25□□□□□ -0.29
ABR-220ENST00000573325 MROH8Q9H579 483 aa13.25□□□□□ -0.29
ABR-220ENST00000573325 IFIT2P09913 472 aaKnown RBP13.24□□□□□ -0.29
ABR-220ENST00000573325 ZNF865P0CJ78 1059 aaPredicted RBP13.24□□□□□ -0.29
ABR-220ENST00000573325 ATN1P54259 1190 aaPredicted RBP13.24□□□□□ -0.29
ABR-220ENST00000573325 LRRC41Q15345 812 aa13.24□□□□□ -0.29
ABR-220ENST00000573325 FAM47AQ5JRC9 791 aa13.24□□□□□ -0.29
ABR-220ENST00000573325 ANO1Q5XXA6 986 aa13.24□□□□□ -0.29
ABR-220ENST00000573325 RIOX2Q8IUF8 465 aa13.24□□□□□ -0.29
ABR-220ENST00000573325 TANGO6Q9C0B7 1094 aa13.24□□□□□ -0.29
ABR-220ENST00000573325 PPP1R9AQ9ULJ8 1098 aa13.24□□□□□ -0.29
ABR-220ENST00000573325 RIPK3Q9Y572 518 aa13.24□□□□□ -0.29
ABR-220ENST00000573325 MPHOSPH10O00566 681 aaKnown RBP13.23□□□□□ -0.29
ABR-220ENST00000573325 FLOT1O75955 427 aa13.23□□□□□ -0.29
ABR-220ENST00000573325 EPHB4P54760 987 aa13.23□□□□□ -0.29
ABR-220ENST00000573325 C9orf50Q5SZB4 431 aa13.23□□□□□ -0.29
ABR-220ENST00000573325 WDR78Q5VTH9 848 aa13.23□□□□□ -0.29
ABR-220ENST00000573325 DIEXFQ68CQ4 756 aaKnown RBP13.23□□□□□ -0.29
ABR-220ENST00000573325 CCAR1Q8IX12 1150 aaKnown RBP13.23□□□□□ -0.29
ABR-220ENST00000573325 SLC17A8Q8NDX2 589 aa13.23□□□□□ -0.29
ABR-220ENST00000573325 KANSL2Q9H9L4 492 aa13.23□□□□□ -0.29
ABR-220ENST00000573325 PDLIM7Q9NR12 457 aa13.23□□□□□ -0.29
ABR-220ENST00000573325 PHF24Q9UPV7 400 aa13.23□□□□□ -0.29
ABR-220ENST00000573325 DIS3Q9Y2L1 958 aaKnown RBP13.23□□□□□ -0.29
ABR-220ENST00000573325 IVNS1ABPQ9Y6Y0 642 aa13.23□□□□□ -0.29
ABR-220ENST00000573325 ATP2A1O14983 1001 aa13.22□□□□□ -0.29
ABR-220ENST00000573325 ADCY6O43306 1168 aa13.22□□□□□ -0.29
ABR-220ENST00000573325 ADAMTS4O75173 837 aa13.22□□□□□ -0.29
ABR-220ENST00000573325 HMMRO75330 724 aa13.22□□□□□ -0.29
ABR-220ENST00000573325 SNAI1O95863 264 aaPredicted RBP13.22□□□□□ -0.29
ABR-220ENST00000573325 PGK2P07205 417 aa13.22□□□□□ -0.29
ABR-220ENST00000573325 SHHQ15465 462 aa13.22□□□□□ -0.29
ABR-220ENST00000573325 DPP9Q86TI2 863 aa13.22□□□□□ -0.29
ABR-220ENST00000573325 NUP88Q99567 741 aaPredicted RBP13.22□□□□□ -0.29
ABR-220ENST00000573325 DCTPP1Q9H773 170 aa13.22□□□□□ -0.29
ABR-220ENST00000573325 NRBP1Q9UHY1 535 aa13.22□□□□□ -0.29
ABR-220ENST00000573325 TACC3Q9Y6A5 838 aa13.22□□□□□ -0.29
ABR-220ENST00000573325 COL11A1P12107 1806 aaPredicted RBP13.22□□□□□ -0.29
ABR-220ENST00000573325 ZNFX1Q9P2E3 1918 aaKnown RBP13.21□□□□□ -0.29
ABR-220ENST00000573325 SALL3Q9BXA9 1300 aa13.21□□□□□ -0.29
ABR-220ENST00000573325 SLC25A27O95847 323 aa13.21□□□□□ -0.29
ABR-220ENST00000573325 MS4A1P11836 297 aa13.21□□□□□ -0.29
ABR-220ENST00000573325 ADCYAP1R1P41586 468 aa13.21□□□□□ -0.29
ABR-220ENST00000573325 IRX5P78411 483 aaPredicted RBP13.21□□□□□ -0.29
ABR-220ENST00000573325 TRIM60Q495X7 471 aa13.21□□□□□ -0.29
ABR-220ENST00000573325 FAM83BQ5T0W9 1011 aa13.21□□□□□ -0.29
ABR-220ENST00000573325 GIMAP6Q6P9H5 292 aa13.21□□□□□ -0.29
ABR-220ENST00000573325 KBTBD3Q8NAB2 608 aa13.21□□□□□ -0.29
ABR-220ENST00000573325 KLHDC9Q8NEP7 349 aa13.21□□□□□ -0.29
ABR-220ENST00000573325 MKL1Q969V6 931 aa13.21□□□□□ -0.29
ABR-220ENST00000573325 LENG1Q96BZ8 264 aaPredicted RBP13.21□□□□□ -0.29
ABR-220ENST00000573325 TINF2Q9BSI4 451 aa13.21□□□□□ -0.29
ABR-220ENST00000573325 KATNBL1Q9H079 304 aa13.21□□□□□ -0.29
ABR-220ENST00000573325 NYAP2Q9P242 653 aa13.21□□□□□ -0.29
ABR-220ENST00000573325 RCAN3Q9UKA8 241 aa13.21□□□□□ -0.29
ABR-220ENST00000573325 SLC4A4Q9Y6R1 1079 aa13.21□□□□□ -0.29
ABR-220ENST00000573325 DLL1O00548 723 aa13.2□□□□□ -0.3
ABR-220ENST00000573325 CTAGE5O15320 804 aa13.2□□□□□ -0.3
ABR-220ENST00000573325 NDUFB10O96000 172 aa13.2□□□□□ -0.3
ABR-220ENST00000573325 FCER1AP12319 257 aa13.2□□□□□ -0.3
ABR-220ENST00000573325 CNGA1P29973 690 aa13.2□□□□□ -0.3
ABR-220ENST00000573325 STAT3P40763 770 aa13.2□□□□□ -0.3
ABR-220ENST00000573325 TSHZ3Q63HK5 1081 aa13.2□□□□□ -0.3
ABR-220ENST00000573325 MAMDC4Q6UXC1 1216 aa13.2□□□□□ -0.3
ABR-220ENST00000573325 NCAPG2Q86XI2 1143 aa13.2□□□□□ -0.3
ABR-220ENST00000573325 ARRDC4Q8NCT1 418 aa13.2□□□□□ -0.3
ABR-220ENST00000573325 LRRCC1Q9C099 1032 aa13.2□□□□□ -0.3
ABR-220ENST00000573325 TTYH1Q9H313 450 aaPredicted RBP13.2□□□□□ -0.3
ABR-220ENST00000573325 ARHGEF10LQ9HCE6 1279 aa13.2□□□□□ -0.3
ABR-220ENST00000573325 ECHDC1Q9NTX5 307 aa13.2□□□□□ -0.3
ABR-220ENST00000573325 REV3LO60673 3130 aa13.2□□□□□ -0.3
ABR-220ENST00000573325 MYH7P12883 1935 aa13.19□□□□□ -0.3
ABR-220ENST00000573325 F5H6K3 240 aa13.19□□□□□ -0.3
ABR-220ENST00000573325 M0R2C6 588 aa13.19□□□□□ -0.3
ABR-220ENST00000573325 KIAA0355O15063 1070 aa13.19□□□□□ -0.3
ABR-220ENST00000573325 NKX3-2P78367 333 aa13.19□□□□□ -0.3
ABR-220ENST00000573325 TLE2Q04725 743 aa13.19□□□□□ -0.3
ABR-220ENST00000573325 KLRC3Q07444 240 aa13.19□□□□□ -0.3
ABR-220ENST00000573325 PI4K2BQ8TCG2 481 aa13.19□□□□□ -0.3
ABR-220ENST00000573325 OTUD7AQ8TE49 926 aaPredicted RBP13.19□□□□□ -0.3
ABR-220ENST00000573325 BADQ92934 168 aa13.19□□□□□ -0.3
ABR-220ENST00000573325 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.19□□□□□ -0.3
ABR-220ENST00000573325 PLIN4Q96Q06 1357 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms