RNA–Protein interactions for RNA: ENST00000573108.1

TRIM25-207, Transcript of tripartite motif containing 25, humanhuman

TSL 3

Gene TRIM25, Length 952 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-207ENST00000573108 ARHGEF10LQ9HCE6 1279 aa14.54□□□□□ -0.08
TRIM25-207ENST00000573108 PRKAG2Q9UGJ0 569 aa14.54□□□□□ -0.08
TRIM25-207ENST00000573108 EYSQ5T1H1 3165 aa14.54□□□□□ -0.08
TRIM25-207ENST00000573108 PLXNA1Q9UIW2 1896 aa14.53□□□□□ -0.08
TRIM25-207ENST00000573108 KBTBD13C9JR72 458 aa14.53□□□□□ -0.08
TRIM25-207ENST00000573108 ADCYAP1R1P41586 468 aa14.53□□□□□ -0.08
TRIM25-207ENST00000573108 CDK8P49336 464 aa14.53□□□□□ -0.08
TRIM25-207ENST00000573108 TRIM60Q495X7 471 aa14.53□□□□□ -0.08
TRIM25-207ENST00000573108 FAM47AQ5JRC9 791 aa14.53□□□□□ -0.08
TRIM25-207ENST00000573108 C12orf60Q5U649 245 aa14.53□□□□□ -0.08
TRIM25-207ENST00000573108 FERMT2Q96AC1 680 aa14.53□□□□□ -0.08
TRIM25-207ENST00000573108 PRDM5Q9NQX1 630 aaPredicted RBP14.53□□□□□ -0.08
TRIM25-207ENST00000573108 ATP8A2Q9NTI2 1148 aa14.53□□□□□ -0.08
TRIM25-207ENST00000573108 FBXO28Q9NVF7 368 aa14.53□□□□□ -0.08
TRIM25-207ENST00000573108 SMCHD1A6NHR9 2005 aa14.53□□□□□ -0.08
TRIM25-207ENST00000573108 USP17L12C9JPN9 530 aa14.52□□□□□ -0.09
TRIM25-207ENST00000573108 USP17L21D6R901 530 aa14.52□□□□□ -0.09
TRIM25-207ENST00000573108 WDR46O15213 610 aaKnown RBP14.52□□□□□ -0.09
TRIM25-207ENST00000573108 EEF2P13639 858 aaKnown RBP14.52□□□□□ -0.09
TRIM25-207ENST00000573108 SNX17Q15036 470 aa14.52□□□□□ -0.09
TRIM25-207ENST00000573108 LRRC41Q15345 812 aa14.52□□□□□ -0.09
TRIM25-207ENST00000573108 SHHQ15465 462 aa14.52□□□□□ -0.09
TRIM25-207ENST00000573108 C9orf50Q5SZB4 431 aa14.52□□□□□ -0.09
TRIM25-207ENST00000573108 FAM109BQ6ICB4 259 aaPredicted RBP14.52□□□□□ -0.09
TRIM25-207ENST00000573108 SH3RF1Q7Z6J0 888 aa14.52□□□□□ -0.09
TRIM25-207ENST00000573108 ABRAQ8N0Z2 381 aa14.52□□□□□ -0.09
TRIM25-207ENST00000573108 SH2D4AQ9H788 454 aa14.52□□□□□ -0.09
TRIM25-207ENST00000573108 SLC5A4Q9NY91 659 aa14.52□□□□□ -0.09
TRIM25-207ENST00000573108 HMMRO75330 724 aa14.51□□□□□ -0.09
TRIM25-207ENST00000573108 PGK2P07205 417 aa14.51□□□□□ -0.09
TRIM25-207ENST00000573108 FCER1AP12319 257 aa14.51□□□□□ -0.09
TRIM25-207ENST00000573108 ATP5JP18859 108 aa14.51□□□□□ -0.09
TRIM25-207ENST00000573108 C16orf86Q6ZW13 317 aa14.51□□□□□ -0.09
TRIM25-207ENST00000573108 BADQ92934 168 aa14.51□□□□□ -0.09
TRIM25-207ENST00000573108 CCDC17Q96LX7 622 aa14.51□□□□□ -0.09
TRIM25-207ENST00000573108 HAUS7Q99871 368 aa14.51□□□□□ -0.09
TRIM25-207ENST00000573108 PDLIM7Q9NR12 457 aa14.51□□□□□ -0.09
TRIM25-207ENST00000573108 ADAMTS5Q9UNA0 930 aa14.51□□□□□ -0.09
TRIM25-207ENST00000573108 TRIM43BA6NCK2 446 aa14.5□□□□□ -0.09
TRIM25-207ENST00000573108 RAB11FIP3O75154 756 aa14.5□□□□□ -0.09
TRIM25-207ENST00000573108 SLC25A27O95847 323 aa14.5□□□□□ -0.09
TRIM25-207ENST00000573108 TAL1P17542 331 aaPredicted RBP14.5□□□□□ -0.09
TRIM25-207ENST00000573108 CTR9Q6PD62 1173 aa14.5□□□□□ -0.09
TRIM25-207ENST00000573108 TRIM43Q96BQ3 446 aaPredicted RBP14.5□□□□□ -0.09
TRIM25-207ENST00000573108 CRBNQ96SW2 442 aa14.5□□□□□ -0.09
TRIM25-207ENST00000573108 MMP19Q99542 508 aa14.5□□□□□ -0.09
TRIM25-207ENST00000573108 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.5□□□□□ -0.09
TRIM25-207ENST00000573108 PUS7LQ9H0K6 701 aaKnown RBP14.5□□□□□ -0.09
TRIM25-207ENST00000573108 PCDHB15Q9Y5E8 787 aa14.5□□□□□ -0.09
TRIM25-207ENST00000573108 SLC4A4Q9Y6R1 1079 aa14.5□□□□□ -0.09
TRIM25-207ENST00000573108 GREB1LQ9C091 1923 aaPredicted RBP14.5□□□□□ -0.09
TRIM25-207ENST00000573108 VWA5AO00534 786 aa14.49□□□□□ -0.09
TRIM25-207ENST00000573108 RAD21O60216 631 aa14.49□□□□□ -0.09
TRIM25-207ENST00000573108 UBE3CQ15386 1083 aa14.49□□□□□ -0.09
TRIM25-207ENST00000573108 FAM83BQ5T0W9 1011 aa14.49□□□□□ -0.09
TRIM25-207ENST00000573108 ZNF697Q5TEC3 545 aa14.49□□□□□ -0.09
TRIM25-207ENST00000573108 RIOX2Q8IUF8 465 aa14.49□□□□□ -0.09
TRIM25-207ENST00000573108 AMOTL1Q8IY63 956 aa14.49□□□□□ -0.09
TRIM25-207ENST00000573108 REPS2Q8NFH8 660 aa14.49□□□□□ -0.09
TRIM25-207ENST00000573108 LENG1Q96BZ8 264 aaPredicted RBP14.49□□□□□ -0.09
TRIM25-207ENST00000573108 TINF2Q9BSI4 451 aa14.49□□□□□ -0.09
TRIM25-207ENST00000573108 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.49□□□□□ -0.09
TRIM25-207ENST00000573108 XPNPEP3Q9NQH7 507 aa14.49□□□□□ -0.09
TRIM25-207ENST00000573108 ZNF214Q9UL59 606 aaPredicted RBP14.49□□□□□ -0.09
TRIM25-207ENST00000573108 PPP1R9AQ9ULJ8 1098 aa14.49□□□□□ -0.09
TRIM25-207ENST00000573108 SMARCA5O60264 1052 aaPredicted RBP14.48□□□□□ -0.09
TRIM25-207ENST00000573108 PGK1P00558 417 aa14.48□□□□□ -0.09
TRIM25-207ENST00000573108 ITGB8P26012 769 aa14.48□□□□□ -0.09
TRIM25-207ENST00000573108 STAT3P40763 770 aa14.48□□□□□ -0.09
TRIM25-207ENST00000573108 TLE2Q04725 743 aa14.48□□□□□ -0.09
TRIM25-207ENST00000573108 ZNF792Q3KQV3 632 aa14.48□□□□□ -0.09
TRIM25-207ENST00000573108 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.48□□□□□ -0.09
TRIM25-207ENST00000573108 STK11IPQ8N1F8 1099 aa14.48□□□□□ -0.09
TRIM25-207ENST00000573108 NUP88Q99567 741 aaPredicted RBP14.48□□□□□ -0.09
TRIM25-207ENST00000573108 COL25A1Q9BXS0 654 aaPredicted RBP14.48□□□□□ -0.09
TRIM25-207ENST00000573108 KANSL2Q9H9L4 492 aa14.48□□□□□ -0.09
TRIM25-207ENST00000573108 PHF24Q9UPV7 400 aa14.48□□□□□ -0.09
TRIM25-207ENST00000573108 CDH23Q9H251 3354 aa14.48□□□□□ -0.09
TRIM25-207ENST00000573108 PRUNE2Q8WUY3 3088 aa14.47□□□□□ -0.09
TRIM25-207ENST00000573108 ZNF865P0CJ78 1059 aaPredicted RBP14.47□□□□□ -0.09
TRIM25-207ENST00000573108 RARBP10826 455 aa14.47□□□□□ -0.09
TRIM25-207ENST00000573108 KCTD2Q14681 263 aa14.47□□□□□ -0.09
TRIM25-207ENST00000573108 C1orf53Q5VUE5 145 aa14.47□□□□□ -0.09
TRIM25-207ENST00000573108 DDRGK1Q96HY6 314 aa14.47□□□□□ -0.09
TRIM25-207ENST00000573108 CDX2Q99626 313 aaPredicted RBP14.47□□□□□ -0.09
TRIM25-207ENST00000573108 GOPCQ9HD26 462 aa14.47□□□□□ -0.09
TRIM25-207ENST00000573108 NRBP1Q9UHY1 535 aa14.47□□□□□ -0.09
TRIM25-207ENST00000573108 SPTBN5Q9NRC6 3674 aaKnown RBP14.47□□□□□ -0.09
TRIM25-207ENST00000573108 VCANP13611 3396 aa14.47□□□□□ -0.09
TRIM25-207ENST00000573108 A0A1W2PQ45 241 aaPredicted RBP14.46□□□□□ -0.09
TRIM25-207ENST00000573108 A0A1W2PQY0 241 aa14.46□□□□□ -0.09
TRIM25-207ENST00000573108 EPHB4P54760 987 aa14.46□□□□□ -0.09
TRIM25-207ENST00000573108 TTYH1Q9H313 450 aaPredicted RBP14.46□□□□□ -0.09
TRIM25-207ENST00000573108 SEMA6BQ9H3T3 888 aa14.46□□□□□ -0.09
TRIM25-207ENST00000573108 DCTPP1Q9H773 170 aa14.46□□□□□ -0.09
TRIM25-207ENST00000573108 DIS3Q9Y2L1 958 aaKnown RBP14.46□□□□□ -0.09
TRIM25-207ENST00000573108 ROBO3Q96MS0 1386 aa14.46□□□□□ -0.1
TRIM25-207ENST00000573108 PQBP1O60828 265 aaKnown RBP14.45□□□□□ -0.1
TRIM25-207ENST00000573108 CLTBP09497 229 aa14.45□□□□□ -0.1
TRIM25-207ENST00000573108 AKR1A1P14550 325 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms