RNA–Protein interactions for RNA: ENST00000572585.5

ABR-218, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 2

Gene ABR, Length 3,776 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-218ENST00000572585 TMEM87BQ96K49 555 aa13.09□□□□□ -0.31
ABR-218ENST00000572585 LRRC1Q9BTT6 524 aa13.09□□□□□ -0.31
ABR-218ENST00000572585 RMND1Q9NWS8 449 aa13.09□□□□□ -0.31
ABR-218ENST00000572585 CEP126Q9P2H0 1117 aa13.09□□□□□ -0.31
ABR-218ENST00000572585 RNMTO43148 476 aaKnown RBP13.08□□□□□ -0.31
ABR-218ENST00000572585 ECM2O94769 699 aaPredicted RBP13.08□□□□□ -0.31
ABR-218ENST00000572585 ARMC2Q8NEN0 867 aa13.08□□□□□ -0.31
ABR-218ENST00000572585 IFT81Q8WYA0 676 aa13.08□□□□□ -0.31
ABR-218ENST00000572585 SGSM3Q96HU1 749 aa13.08□□□□□ -0.31
ABR-218ENST00000572585 GGA2Q9UJY4 613 aa13.08□□□□□ -0.31
ABR-218ENST00000572585 KDM6AO15550 1401 aaPredicted RBP13.08□□□□□ -0.32
ABR-218ENST00000572585 WDR17Q8IZU2 1322 aa13.08□□□□□ -0.32
ABR-218ENST00000572585 BMP15O95972 392 aa13.08□□□□□ -0.32
ABR-218ENST00000572585 RPSAP08865 295 aaKnown RBP13.08□□□□□ -0.32
ABR-218ENST00000572585 HPDP32754 393 aaPredicted RBP13.08□□□□□ -0.32
ABR-218ENST00000572585 SLC7A5Q01650 507 aa13.08□□□□□ -0.32
ABR-218ENST00000572585 CUL4BQ13620 913 aa13.08□□□□□ -0.32
ABR-218ENST00000572585 FKBP15Q5T1M5 1219 aa13.08□□□□□ -0.32
ABR-218ENST00000572585 AP1ARQ63HQ0 302 aa13.08□□□□□ -0.32
ABR-218ENST00000572585 NAIF1Q69YI7 327 aaPredicted RBP13.08□□□□□ -0.32
ABR-218ENST00000572585 APTXQ7Z2E3 356 aaKnown RBP13.08□□□□□ -0.32
ABR-218ENST00000572585 RNPC3Q96LT9 517 aaKnown RBP13.08□□□□□ -0.32
ABR-218ENST00000572585 CCDC42Q96M95 316 aa13.08□□□□□ -0.32
ABR-218ENST00000572585 TBC1D2BQ9UPU7 963 aa13.08□□□□□ -0.32
ABR-218ENST00000572585 RIMS1Q86UR5 1692 aaKnown RBP13.08□□□□□ -0.32
ABR-218ENST00000572585 MYO5BQ9ULV0 1848 aa13.08□□□□□ -0.32
ABR-218ENST00000572585 CYB5D1Q6P9G0 228 aa13.08□□□□□ -0.32
ABR-218ENST00000572585 APPBP2Q92624 585 aa13.08□□□□□ -0.32
ABR-218ENST00000572585 PAGE5Q96GU1 130 aa13.08□□□□□ -0.32
ABR-218ENST00000572585 MED15Q96RN5 788 aa13.08□□□□□ -0.32
ABR-218ENST00000572585 PYM1Q9BRP8 204 aaKnown RBP13.08□□□□□ -0.32
ABR-218ENST00000572585 PHF8Q9UPP1 1060 aa13.08□□□□□ -0.32
ABR-218ENST00000572585 RIPOR2Q9Y4F9 1068 aa13.08□□□□□ -0.32
ABR-218ENST00000572585 HYOU1Q9Y4L1 999 aa13.08□□□□□ -0.32
ABR-218ENST00000572585 HMGB1P1B2RPK0 211 aaPredicted RBP13.07□□□□□ -0.32
ABR-218ENST00000572585 IFIT3O14879 490 aaKnown RBP13.07□□□□□ -0.32
ABR-218ENST00000572585 BUB1BO60566 1050 aaPredicted RBP13.07□□□□□ -0.32
ABR-218ENST00000572585 FAM107AO95990 144 aa13.07□□□□□ -0.32
ABR-218ENST00000572585 MDH1P40925 334 aaKnown RBP13.07□□□□□ -0.32
ABR-218ENST00000572585 ANTXR2P58335 489 aa13.07□□□□□ -0.32
ABR-218ENST00000572585 TCP11X2Q5H9J9 407 aa13.07□□□□□ -0.32
ABR-218ENST00000572585 WLSQ5T9L3 541 aa13.07□□□□□ -0.32
ABR-218ENST00000572585 EGFL6Q8IUX8 553 aa13.07□□□□□ -0.32
ABR-218ENST00000572585 MYCBPAPQ8TBZ2 947 aa13.07□□□□□ -0.32
ABR-218ENST00000572585 NELFBQ8WX92 580 aa13.07□□□□□ -0.32
ABR-218ENST00000572585 KCNJ14Q9UNX9 436 aa13.07□□□□□ -0.32
ABR-218ENST00000572585 RGPD1P0DJD0 1748 aa13.07□□□□□ -0.32
ABR-218ENST00000572585 TTC26A0AVF1 554 aa13.07□□□□□ -0.32
ABR-218ENST00000572585 ERICH2A1L162 156 aa13.07□□□□□ -0.32
ABR-218ENST00000572585 GRIN1Q05586 938 aa13.07□□□□□ -0.32
ABR-218ENST00000572585 NBPF9Q3BBW0 867 aa13.07□□□□□ -0.32
ABR-218ENST00000572585 TTMPQ5BVD1 217 aa13.07□□□□□ -0.32
ABR-218ENST00000572585 CACNA2D3Q8IZS8 1091 aa13.07□□□□□ -0.32
ABR-218ENST00000572585 RASSF8Q8NHQ8 419 aa13.07□□□□□ -0.32
ABR-218ENST00000572585 XAGE2Q96GT9 111 aa13.07□□□□□ -0.32
ABR-218ENST00000572585 ZIM3Q96PE6 472 aa13.07□□□□□ -0.32
ABR-218ENST00000572585 FOXP1Q9H334 677 aaPredicted RBP13.07□□□□□ -0.32
ABR-218ENST00000572585 CABP5Q9NP86 173 aa13.07□□□□□ -0.32
ABR-218ENST00000572585 RWDD2AQ9UIY3 292 aa13.07□□□□□ -0.32
ABR-218ENST00000572585 N4BP2Q86UW6 1770 aaPredicted RBP13.07□□□□□ -0.32
ABR-218ENST00000572585 DIP2CQ9Y2E4 1556 aa13.07□□□□□ -0.32
ABR-218ENST00000572585 PEAK1Q9H792 1746 aa13.07□□□□□ -0.32
ABR-218ENST00000572585 CD44P16070 742 aaKnown RBP13.07□□□□□ -0.32
ABR-218ENST00000572585 MAP2K1Q02750 393 aaPredicted RBP13.07□□□□□ -0.32
ABR-218ENST00000572585 CCDC170Q8IYT3 715 aa13.07□□□□□ -0.32
ABR-218ENST00000572585 SPATA4Q8NEY3 305 aa13.07□□□□□ -0.32
ABR-218ENST00000572585 NUP58Q9BVL2 599 aa13.07□□□□□ -0.32
ABR-218ENST00000572585 GPR108Q9NPR9 543 aa13.07□□□□□ -0.32
ABR-218ENST00000572585 OVOS2A0A0G2JMS6 1433 aa13.07□□□□□ -0.32
ABR-218ENST00000572585 MYH15Q9Y2K3 1946 aa13.07□□□□□ -0.32
ABR-218ENST00000572585 CPDO75976 1380 aa13.07□□□□□ -0.32
ABR-218ENST00000572585 COBLO75128 1261 aa13.06□□□□□ -0.32
ABR-218ENST00000572585 MMP1P03956 469 aa13.06□□□□□ -0.32
ABR-218ENST00000572585 ZC3H6P61129 1189 aaKnown RBP13.06□□□□□ -0.32
ABR-218ENST00000572585 HDLBPQ00341 1268 aaKnown RBP13.06□□□□□ -0.32
ABR-218ENST00000572585 ATP6V0A4Q9HBG4 840 aa13.06□□□□□ -0.32
ABR-218ENST00000572585 BAIAP2L1Q9UHR4 511 aa13.06□□□□□ -0.32
ABR-218ENST00000572585 DMGDHQ9UI17 866 aaKnown RBP13.06□□□□□ -0.32
ABR-218ENST00000572585 KCNG1Q9UIX4 513 aa13.06□□□□□ -0.32
ABR-218ENST00000572585 SNX12Q9UMY4 172 aa13.06□□□□□ -0.32
ABR-218ENST00000572585 IQSEC3Q9UPP2 1182 aaPredicted RBP13.06□□□□□ -0.32
ABR-218ENST00000572585 PCDHB6Q9Y5E3 794 aa13.06□□□□□ -0.32
ABR-218ENST00000572585 H7C1D1 291 aa13.06□□□□□ -0.32
ABR-218ENST00000572585 SH2B2O14492 632 aaPredicted RBP13.06□□□□□ -0.32
ABR-218ENST00000572585 RASSF9O75901 435 aa13.06□□□□□ -0.32
ABR-218ENST00000572585 RFX5P48382 616 aaPredicted RBP13.06□□□□□ -0.32
ABR-218ENST00000572585 SEC24CP53992 1094 aa13.06□□□□□ -0.32
ABR-218ENST00000572585 CPLX4Q7Z7G2 160 aa13.06□□□□□ -0.32
ABR-218ENST00000572585 CCDC82Q8N4S0 544 aa13.06□□□□□ -0.32
ABR-218ENST00000572585 KRT14P02533 472 aa13.06□□□□□ -0.32
ABR-218ENST00000572585 CAVIN3Q969G5 261 aa13.06□□□□□ -0.32
ABR-218ENST00000572585 PAGR1Q9BTK6 254 aa13.06□□□□□ -0.32
ABR-218ENST00000572585 BATF3Q9NR55 127 aa13.06□□□□□ -0.32
ABR-218ENST00000572585 AATFQ9NY61 560 aaKnown RBP eCLIP13.06□□□□□ -0.32
ABR-218ENST00000572585 TBX22Q9Y458 520 aa13.06□□□□□ -0.32
ABR-218ENST00000572585 PTPRUQ92729 1446 aa13.05□□□□□ -0.32
ABR-218ENST00000572585 PRAMEF22A3QJZ6 481 aa13.05□□□□□ -0.32
ABR-218ENST00000572585 NUTM2BA6NNL0 878 aaPredicted RBP13.05□□□□□ -0.32
ABR-218ENST00000572585 NUTM2EB1AL46 878 aaPredicted RBP13.05□□□□□ -0.32
ABR-218ENST00000572585 PPP1R3GB7ZBB8 358 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms