RNA–Protein interactions for RNA: ENST00000571806.1

TSR1-202, Transcript of TSR1, ribosome maturation factor, humanhuman

TSL 2

Gene TSR1, Length 794 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-202ENST00000571806 KCTD2Q14681 263 aa18.64■□□□□ 0.57
TSR1-202ENST00000571806 TMEM132BQ14DG7 1078 aa18.64■□□□□ 0.57
TSR1-202ENST00000571806 SBK1Q52WX2 424 aa18.64■□□□□ 0.57
TSR1-202ENST00000571806 GJC2Q5T442 439 aaPredicted RBP18.64■□□□□ 0.57
TSR1-202ENST00000571806 SLC39A5Q6ZMH5 540 aa18.64■□□□□ 0.57
TSR1-202ENST00000571806 GPATCH3Q96I76 525 aa18.64■□□□□ 0.57
TSR1-202ENST00000571806 PUS7LQ9H0K6 701 aaKnown RBP18.64■□□□□ 0.57
TSR1-202ENST00000571806 ECHDC1Q9NTX5 307 aa18.64■□□□□ 0.57
TSR1-202ENST00000571806 STXBP5LQ9Y2K9 1186 aa18.64■□□□□ 0.57
TSR1-202ENST00000571806 PARP14Q460N5 1801 aa18.63■□□□□ 0.57
TSR1-202ENST00000571806 CYP2D7A0A087X1C5 515 aa18.63■□□□□ 0.57
TSR1-202ENST00000571806 RTP1P59025 263 aa18.63■□□□□ 0.57
TSR1-202ENST00000571806 SLFNL1Q499Z3 407 aa18.63■□□□□ 0.57
TSR1-202ENST00000571806 C1orf53Q5VUE5 145 aa18.63■□□□□ 0.57
TSR1-202ENST00000571806 FAM109BQ6ICB4 259 aaPredicted RBP18.63■□□□□ 0.57
TSR1-202ENST00000571806 CLEC10AQ8IUN9 316 aa18.63■□□□□ 0.57
TSR1-202ENST00000571806 MMP19Q99542 508 aa18.63■□□□□ 0.57
TSR1-202ENST00000571806 ZNF287Q9HBT7 754 aa18.63■□□□□ 0.57
TSR1-202ENST00000571806 PPP1R9AQ9ULJ8 1098 aa18.63■□□□□ 0.57
TSR1-202ENST00000571806 VWA5AO00534 786 aa18.62■□□□□ 0.57
TSR1-202ENST00000571806 ZFYP08048 801 aaPredicted RBP18.62■□□□□ 0.57
TSR1-202ENST00000571806 STAT3P40763 770 aa18.62■□□□□ 0.57
TSR1-202ENST00000571806 LRRFIP1Q32MZ4 808 aaKnown RBP18.62■□□□□ 0.57
TSR1-202ENST00000571806 STRBPQ96SI9 672 aaKnown RBP18.62■□□□□ 0.57
TSR1-202ENST00000571806 MKNK2Q9HBH9 465 aa18.62■□□□□ 0.57
TSR1-202ENST00000571806 MTMR10Q9NXD2 777 aa18.62■□□□□ 0.57
TSR1-202ENST00000571806 DNAH12Q6ZR08 3092 aa18.62■□□□□ 0.57
TSR1-202ENST00000571806 RARBP10826 455 aa18.61■□□□□ 0.57
TSR1-202ENST00000571806 GNAT2P19087 354 aa18.61■□□□□ 0.57
TSR1-202ENST00000571806 SNX17Q15036 470 aa18.61■□□□□ 0.57
TSR1-202ENST00000571806 SAMD1Q6SPF0 538 aaPredicted RBP18.61■□□□□ 0.57
TSR1-202ENST00000571806 MSL3Q8N5Y2 521 aaKnown RBP18.61■□□□□ 0.57
TSR1-202ENST00000571806 KBTBD3Q8NAB2 608 aa18.61■□□□□ 0.57
TSR1-202ENST00000571806 TINF2Q9BSI4 451 aa18.61■□□□□ 0.57
TSR1-202ENST00000571806 NYAP2Q9P242 653 aa18.61■□□□□ 0.57
TSR1-202ENST00000571806 ATP11BQ9Y2G3 1177 aa18.61■□□□□ 0.57
TSR1-202ENST00000571806 COL6A3P12111 3177 aa18.61■□□□□ 0.57
TSR1-202ENST00000571806 RAD21O60216 631 aa18.6■□□□□ 0.57
TSR1-202ENST00000571806 LRRC41Q15345 812 aa18.6■□□□□ 0.57
TSR1-202ENST00000571806 PRAMEF19Q5SWL8 479 aa18.6■□□□□ 0.57
TSR1-202ENST00000571806 RNF180Q86T96 592 aa18.6■□□□□ 0.57
TSR1-202ENST00000571806 ZNF214Q9UL59 606 aaPredicted RBP18.6■□□□□ 0.57
TSR1-202ENST00000571806 SYNPO2Q9UMS6 1093 aa18.6■□□□□ 0.57
TSR1-202ENST00000571806 ZNFX1Q9P2E3 1918 aaKnown RBP18.6■□□□□ 0.57
TSR1-202ENST00000571806 ROBO3Q96MS0 1386 aa18.59■□□□□ 0.57
TSR1-202ENST00000571806 COL11A1P12107 1806 aaPredicted RBP18.59■□□□□ 0.57
TSR1-202ENST00000571806 GSG1L2A8MUP6 293 aa18.59■□□□□ 0.57
TSR1-202ENST00000571806 POTEB2H3BUK9 544 aa18.59■□□□□ 0.57
TSR1-202ENST00000571806 SMIM22K7EJ46 135 aa18.59■□□□□ 0.57
TSR1-202ENST00000571806 DLL1O00548 723 aa18.59■□□□□ 0.57
TSR1-202ENST00000571806 ZNF792Q3KQV3 632 aa18.59■□□□□ 0.57
TSR1-202ENST00000571806 FAM83BQ5T0W9 1011 aa18.59■□□□□ 0.57
TSR1-202ENST00000571806 ANO1Q5XXA6 986 aa18.59■□□□□ 0.57
TSR1-202ENST00000571806 Q7L0L9 218 aa18.59■□□□□ 0.57
TSR1-202ENST00000571806 PRPF38AQ8NAV1 312 aaKnown RBP18.59■□□□□ 0.57
TSR1-202ENST00000571806 APPBP2Q92624 585 aa18.59■□□□□ 0.57
TSR1-202ENST00000571806 SLF1Q9BQI6 1058 aa18.59■□□□□ 0.57
TSR1-202ENST00000571806 TEX13BQ9BXU2 312 aa18.59■□□□□ 0.57
TSR1-202ENST00000571806 XPNPEP3Q9NQH7 507 aa18.59■□□□□ 0.57
TSR1-202ENST00000571806 FBXO28Q9NVF7 368 aa18.59■□□□□ 0.57
TSR1-202ENST00000571806 CNPY2Q9Y2B0 182 aa18.59■□□□□ 0.57
TSR1-202ENST00000571806 RNF113AO15541 343 aaKnown RBP18.58■□□□□ 0.56
TSR1-202ENST00000571806 SMARCA5O60264 1052 aaPredicted RBP18.58■□□□□ 0.56
TSR1-202ENST00000571806 MYCNP04198 464 aaPredicted RBP18.58■□□□□ 0.56
TSR1-202ENST00000571806 CHGBP05060 677 aa18.58■□□□□ 0.56
TSR1-202ENST00000571806 RASA1P20936 1047 aa18.58■□□□□ 0.56
TSR1-202ENST00000571806 ADCYAP1R1P41586 468 aa18.58■□□□□ 0.56
TSR1-202ENST00000571806 ZNF444Q8N0Y2 327 aaPredicted RBP18.58■□□□□ 0.56
TSR1-202ENST00000571806 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.58■□□□□ 0.56
TSR1-202ENST00000571806 DCTPP1Q9H773 170 aa18.58■□□□□ 0.56
TSR1-202ENST00000571806 PHF24Q9UPV7 400 aa18.58■□□□□ 0.56
TSR1-202ENST00000571806 GREB1LQ9C091 1923 aaPredicted RBP18.57■□□□□ 0.56
TSR1-202ENST00000571806 MINDY4BA8MYZ0 360 aa18.57■□□□□ 0.56
TSR1-202ENST00000571806 F5H6K3 240 aa18.57■□□□□ 0.56
TSR1-202ENST00000571806 ATP2A1O14983 1001 aa18.57■□□□□ 0.56
TSR1-202ENST00000571806 PGK2P07205 417 aa18.57■□□□□ 0.56
TSR1-202ENST00000571806 AKR1A1P14550 325 aa18.57■□□□□ 0.56
TSR1-202ENST00000571806 KLRC3Q07444 240 aa18.57■□□□□ 0.56
TSR1-202ENST00000571806 FAM47AQ5JRC9 791 aa18.57■□□□□ 0.56
TSR1-202ENST00000571806 REPS2Q8NFH8 660 aa18.57■□□□□ 0.56
TSR1-202ENST00000571806 CTDP1Q9Y5B0 961 aaPredicted RBP18.57■□□□□ 0.56
TSR1-202ENST00000571806 TACC3Q9Y6A5 838 aa18.57■□□□□ 0.56
TSR1-202ENST00000571806 SYNGAP1Q96PV0 1343 aa18.56■□□□□ 0.56
TSR1-202ENST00000571806 ZBED4O75132 1171 aa18.56■□□□□ 0.56
TSR1-202ENST00000571806 TRIM60Q495X7 471 aa18.56■□□□□ 0.56
TSR1-202ENST00000571806 OSBP2Q969R2 916 aa18.56■□□□□ 0.56
TSR1-202ENST00000571806 MKL1Q969V6 931 aa18.56■□□□□ 0.56
TSR1-202ENST00000571806 DDX11Q96FC9 970 aa18.56■□□□□ 0.56
TSR1-202ENST00000571806 TSEN34Q9BSV6 310 aaKnown RBP18.56■□□□□ 0.56
TSR1-202ENST00000571806 PRDM5Q9NQX1 630 aaPredicted RBP18.56■□□□□ 0.56
TSR1-202ENST00000571806 PLXNA1Q9UIW2 1896 aa18.56■□□□□ 0.56
TSR1-202ENST00000571806 LTBP2Q14767 1821 aa18.56■□□□□ 0.56
TSR1-202ENST00000571806 PATL2C9JE40 543 aaKnown RBP18.55■□□□□ 0.56
TSR1-202ENST00000571806 GPAA1O43292 621 aa18.55■□□□□ 0.56
TSR1-202ENST00000571806 FDX1P10109 184 aa18.55■□□□□ 0.56
TSR1-202ENST00000571806 TDO2P48775 406 aa18.55■□□□□ 0.56
TSR1-202ENST00000571806 C20orf194Q5TEA3 1177 aa18.55■□□□□ 0.56
TSR1-202ENST00000571806 SNRNP48Q6IEG0 339 aaKnown RBP18.55■□□□□ 0.56
TSR1-202ENST00000571806 MAMDC4Q6UXC1 1216 aa18.55■□□□□ 0.56
TSR1-202ENST00000571806 ZNF467Q7Z7K2 595 aaPredicted RBP18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms