RNA–Protein interactions for RNA: ENST00000571613.5

RPAIN-210, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,688 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-210ENST00000571613 RIOX1Q9H6W3 641 aa22.33■■□□□ 1.17
RPAIN-210ENST00000571613 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.33■■□□□ 1.172e-7■■□□□ 11.6
RPAIN-210ENST00000571613 DACT1Q9NYF0 836 aa22.33■■□□□ 1.17
RPAIN-210ENST00000571613 USP17L5A8MUK1 530 aa22.33■■□□□ 1.16
RPAIN-210ENST00000571613 WNT10BO00744 389 aa22.33■■□□□ 1.16
RPAIN-210ENST00000571613 CYTH3O43739 400 aa22.33■■□□□ 1.16
RPAIN-210ENST00000571613 TRAPPC10P48553 1259 aa22.33■■□□□ 1.16
RPAIN-210ENST00000571613 NR5A1Q13285 461 aa22.33■■□□□ 1.16
RPAIN-210ENST00000571613 LRRC47Q8N1G4 583 aaKnown RBP22.33■■□□□ 1.16
RPAIN-210ENST00000571613 NLGN2Q8NFZ4 835 aa22.33■■□□□ 1.16
RPAIN-210ENST00000571613 VEZTQ9HBM0 779 aa22.33■■□□□ 1.16
RPAIN-210ENST00000571613 BARHL2Q9NY43 387 aa22.33■■□□□ 1.16
RPAIN-210ENST00000571613 SIPA1L1O43166 1804 aa22.32■■□□□ 1.16
RPAIN-210ENST00000571613 CTAGE5O15320 804 aa22.32■■□□□ 1.16
RPAIN-210ENST00000571613 FAM160A1Q05DH4 1040 aa22.32■■□□□ 1.16
RPAIN-210ENST00000571613 PTPAQ15257 358 aa22.32■■□□□ 1.16
RPAIN-210ENST00000571613 DCAF4Q8WV16 495 aa22.32■■□□□ 1.16
RPAIN-210ENST00000571613 TSPY26PQ9H489 355 aa22.32■■□□□ 1.16
RPAIN-210ENST00000571613 GOLGA8HP0CJ92 632 aa22.31■■□□□ 1.16
RPAIN-210ENST00000571613 ICA1Q05084 483 aa22.31■■□□□ 1.16
RPAIN-210ENST00000571613 ZNF543Q08ER8 600 aa22.31■■□□□ 1.16
RPAIN-210ENST00000571613 MAP3K11Q16584 847 aa22.31■■□□□ 1.16
RPAIN-210ENST00000571613 DAGLBQ8NCG7 672 aa22.31■■□□□ 1.16
RPAIN-210ENST00000571613 OXER1Q8TDS5 423 aa22.31■■□□□ 1.16
RPAIN-210ENST00000571613 TNMDQ9H2S6 317 aa22.31■■□□□ 1.16
RPAIN-210ENST00000571613 CLSTN2Q9H4D0 955 aa22.31■■□□□ 1.16
RPAIN-210ENST00000571613 PCDHA4Q9UN74 947 aa22.31■■□□□ 1.16
RPAIN-210ENST00000571613 CNTNAP1P78357 1384 aa22.3■■□□□ 1.16
RPAIN-210ENST00000571613 CMA1P23946 247 aa22.3■■□□□ 1.16
RPAIN-210ENST00000571613 ATP2B2Q01814 1243 aa22.3■■□□□ 1.16
RPAIN-210ENST00000571613 RASSF7Q02833 373 aa22.3■■□□□ 1.16
RPAIN-210ENST00000571613 FSIP1Q8NA03 581 aa22.3■■□□□ 1.16
RPAIN-210ENST00000571613 SHISA4Q96DD7 197 aa22.3■■□□□ 1.16
RPAIN-210ENST00000571613 TRIM75PA6NK02 468 aa22.3■■□□□ 1.16
RPAIN-210ENST00000571613 KINO60870 393 aaKnown RBP22.3■■□□□ 1.16
RPAIN-210ENST00000571613 CUTAO60888 179 aa22.3■■□□□ 1.16
RPAIN-210ENST00000571613 EEF2P13639 858 aaKnown RBP22.3■■□□□ 1.16
RPAIN-210ENST00000571613 NPY5RQ15761 445 aa22.3■■□□□ 1.16
RPAIN-210ENST00000571613 BLIDQ8IZY5 108 aa22.3■■□□□ 1.16
RPAIN-210ENST00000571613 FAM196BA6NMK8 535 aa22.29■■□□□ 1.16
RPAIN-210ENST00000571613 NR1I2O75469 434 aa22.29■■□□□ 1.16
RPAIN-210ENST00000571613 GNA11P29992 359 aa22.29■■□□□ 1.16
RPAIN-210ENST00000571613 TOB1P50616 345 aaPredicted RBP22.29■■□□□ 1.16
RPAIN-210ENST00000571613 HEATR3Q7Z4Q2 680 aa22.29■■□□□ 1.16
RPAIN-210ENST00000571613 GMCL1P1Q8NEA9 526 aa22.29■■□□□ 1.16
RPAIN-210ENST00000571613 PIBF1Q8WXW3 757 aa22.29■■□□□ 1.16
RPAIN-210ENST00000571613 TNFRSF25Q93038 417 aa22.29■■□□□ 1.16
RPAIN-210ENST00000571613 SEPT2Q15019 361 aa22.28■■□□□ 1.16
RPAIN-210ENST00000571613 SLC35G1Q2M3R5 365 aa22.28■■□□□ 1.16
RPAIN-210ENST00000571613 WWC2Q6AWC2 1192 aa22.28■■□□□ 1.16
RPAIN-210ENST00000571613 ESYT2A0FGR8 921 aa22.27■■□□□ 1.16
RPAIN-210ENST00000571613 STXBP3O00186 592 aa22.27■■□□□ 1.16
RPAIN-210ENST00000571613 XRCC6P12956 609 aaKnown RBP eCLIP22.27■■□□□ 1.16
RPAIN-210ENST00000571613 LMNB1P20700 586 aa22.27■■□□□ 1.16
RPAIN-210ENST00000571613 GMPSP49915 693 aaPredicted RBP22.27■■□□□ 1.16
RPAIN-210ENST00000571613 NBPF9Q3BBW0 867 aa22.27■■□□□ 1.16
RPAIN-210ENST00000571613 AXDND1Q5T1B0 1012 aaPredicted RBP22.27■■□□□ 1.16
RPAIN-210ENST00000571613 RBM43Q6ZSC3 357 aaKnown RBP22.27■■□□□ 1.16
RPAIN-210ENST00000571613 KRI1Q8N9T8 703 aaKnown RBP22.27■■□□□ 1.16
RPAIN-210ENST00000571613 ENGASEQ8NFI3 743 aa22.27■■□□□ 1.16
RPAIN-210ENST00000571613 ZMYND12Q9H0C1 365 aa22.27■■□□□ 1.16
RPAIN-210ENST00000571613 C6orf50Q9HD87 102 aa22.27■■□□□ 1.16
RPAIN-210ENST00000571613 CNOT7Q9UIV1 285 aaKnown RBP22.27■■□□□ 1.16
RPAIN-210ENST00000571613 GH2P01242 217 aa22.26■■□□□ 1.15
RPAIN-210ENST00000571613 CCDC192P0DO97 292 aa22.26■■□□□ 1.15
RPAIN-210ENST00000571613 MAP3K10Q02779 954 aa22.26■■□□□ 1.15
RPAIN-210ENST00000571613 CCDC96Q2M329 555 aa22.26■■□□□ 1.15
RPAIN-210ENST00000571613 SLFN13Q68D06 897 aa22.26■■□□□ 1.15
RPAIN-210ENST00000571613 MICALL2Q8IY33 904 aa22.26■■□□□ 1.15
RPAIN-210ENST00000571613 ANP32BQ92688 251 aaKnown RBP22.26■■□□□ 1.15
RPAIN-210ENST00000571613 GPKOWQ92917 476 aaPredicted RBP eCLIP22.26■■□□□ 1.15
RPAIN-210ENST00000571613 ARHGEF10LQ9HCE6 1279 aa22.26■■□□□ 1.15
RPAIN-210ENST00000571613 GJA3Q9Y6H8 435 aa22.26■■□□□ 1.15
RPAIN-210ENST00000571613 FRMPD2Q68DX3 1309 aaPredicted RBP22.26■■□□□ 1.15
RPAIN-210ENST00000571613 H7C1D1 291 aa22.26■■□□□ 1.15
RPAIN-210ENST00000571613 GDF11O95390 407 aa22.26■■□□□ 1.15
RPAIN-210ENST00000571613 SLC1A4P43007 532 aa22.26■■□□□ 1.15
RPAIN-210ENST00000571613 NAPAP54920 295 aa22.26■■□□□ 1.15
RPAIN-210ENST00000571613 PPP1R18Q6NYC8 613 aa22.26■■□□□ 1.15
RPAIN-210ENST00000571613 CLEC10AQ8IUN9 316 aa22.26■■□□□ 1.15
RPAIN-210ENST00000571613 ZNF579Q8NAF0 562 aaKnown RBP22.26■■□□□ 1.15
RPAIN-210ENST00000571613 GMCL1Q96IK5 515 aa22.26■■□□□ 1.15
RPAIN-210ENST00000571613 BAZ2BQ9UIF8 2168 aaKnown RBP22.25■■□□□ 1.15
RPAIN-210ENST00000571613 PNMA6FA0A0J9YX94 578 aa22.25■■□□□ 1.15
RPAIN-210ENST00000571613 PTPREP23469 700 aa22.25■■□□□ 1.15
RPAIN-210ENST00000571613 MARCKSP29966 332 aaPredicted RBP22.25■■□□□ 1.15
RPAIN-210ENST00000571613 SNW1Q13573 536 aaKnown RBP22.25■■□□□ 1.15
RPAIN-210ENST00000571613 ARHGAP27Q6ZUM4 889 aa22.25■■□□□ 1.15
RPAIN-210ENST00000571613 HOMER1Q86YM7 354 aa22.25■■□□□ 1.15
RPAIN-210ENST00000571613 PIGSQ96S52 555 aa22.25■■□□□ 1.15
RPAIN-210ENST00000571613 UBA5Q9GZZ9 404 aa22.25■■□□□ 1.15
RPAIN-210ENST00000571613 VAT1LQ9HCJ6 419 aa22.25■■□□□ 1.15
RPAIN-210ENST00000571613 GPCPD1Q9NPB8 672 aa22.25■■□□□ 1.15
RPAIN-210ENST00000571613 GINM1Q9NU53 330 aa22.25■■□□□ 1.15
RPAIN-210ENST00000571613 MYH4Q9Y623 1939 aa22.24■■□□□ 1.15
RPAIN-210ENST00000571613 FAM237AA0A1B0GTK4 181 aa22.24■■□□□ 1.15
RPAIN-210ENST00000571613 CCDC194A0A1B0GVG4 234 aa22.24■■□□□ 1.15
RPAIN-210ENST00000571613 VEGFAP15692 232 aaPredicted RBP22.24■■□□□ 1.15
RPAIN-210ENST00000571613 TTC38Q5R3I4 469 aa22.24■■□□□ 1.15
RPAIN-210ENST00000571613 FMR1NBQ8N0W7 255 aaPredicted RBP22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 1215.2 ms