RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, human

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMG6-208	ENST00000570874	ATG3	Q9NT62	314 aa		4.11	□□□□□ -1.75
SMG6-208	ENST00000570874	COMMD8	Q9NX08	183 aa		4.11	□□□□□ -1.75
SMG6-208	ENST00000570874	DCAF16	Q9NXF7	216 aa		4.11	□□□□□ -1.75
SMG6-208	ENST00000570874	SNTG2	Q9NY99	539 aa		4.11	□□□□□ -1.75
SMG6-208	ENST00000570874	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	4.11	□□□□□ -1.75
SMG6-208	ENST00000570874	DBF4	Q9UBU7	674 aa	Predicted RBP	4.11	□□□□□ -1.75
SMG6-208	ENST00000570874	SUN2	Q9UH99	717 aa		4.11	□□□□□ -1.75
SMG6-208	ENST00000570874	XPO7	Q9UIA9	1087 aa	Known RBP	4.11	□□□□□ -1.75
SMG6-208	ENST00000570874	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	4.11	□□□□□ -1.75
SMG6-208	ENST00000570874	TNS1	Q9HBL0	1735 aa	Known RBP	4.11	□□□□□ -1.75
SMG6-208	ENST00000570874	SPATA31A5	Q5VU36	1347 aa		4.11	□□□□□ -1.75
SMG6-208	ENST00000570874	SPATA31A7	Q8IWB4	1347 aa		4.11	□□□□□ -1.75
SMG6-208	ENST00000570874	JCAD	Q9P266	1359 aa		4.11	□□□□□ -1.75
SMG6-208	ENST00000570874	ANKRD31	Q8N7Z5	1873 aa		4.11	□□□□□ -1.75
SMG6-208	ENST00000570874	MYH6	P13533	1939 aa		4.11	□□□□□ -1.75
SMG6-208	ENST00000570874	BAZ2A	Q9UIF9	1905 aa	Known RBP	4.11	□□□□□ -1.75
SMG6-208	ENST00000570874	TNRC6C	Q9HCJ0	1690 aa	Known RBP	4.1	□□□□□ -1.75
SMG6-208	ENST00000570874	ECM29	Q5VYK3	1845 aa		4.1	□□□□□ -1.75
SMG6-208	ENST00000570874	ESYT3	A0FGR9	886 aa		4.1	□□□□□ -1.75
SMG6-208	ENST00000570874	TMEM110-MUSTN1	A8MSY1	372 aa		4.1	□□□□□ -1.75
SMG6-208	ENST00000570874	ATP5J2-PTCD1	G3V325	749 aa		4.1	□□□□□ -1.75
SMG6-208	ENST00000570874	CPLX1	O14810	134 aa		4.1	□□□□□ -1.75
SMG6-208	ENST00000570874	TRIM37	O94972	964 aa		4.1	□□□□□ -1.75
SMG6-208	ENST00000570874	RASGRP1	O95267	797 aa		4.1	□□□□□ -1.75
SMG6-208	ENST00000570874	FMNL1	O95466	1100 aa	Predicted RBP	4.1	□□□□□ -1.75
SMG6-208	ENST00000570874	GNAI2	P04899	355 aa		4.1	□□□□□ -1.75
SMG6-208	ENST00000570874	UBTFL1	P0CB47	393 aa	Predicted RBP	4.1	□□□□□ -1.75
SMG6-208	ENST00000570874	IDE	P14735	1019 aa		4.1	□□□□□ -1.75
SMG6-208	ENST00000570874	GSPT1	P15170	499 aa	Known RBP	4.1	□□□□□ -1.75
SMG6-208	ENST00000570874	HSPA1L	P34931	641 aa		4.1	□□□□□ -1.75
SMG6-208	ENST00000570874	HTR3A	P46098	478 aa		4.1	□□□□□ -1.75
SMG6-208	ENST00000570874	GJA8	P48165	433 aa		4.1	□□□□□ -1.75
SMG6-208	ENST00000570874	SLC4A3	P48751	1232 aa		4.1	□□□□□ -1.75
SMG6-208	ENST00000570874	SNX16	P57768	344 aa		4.1	□□□□□ -1.75
SMG6-208	ENST00000570874	RACK1	P63244	317 aa	Known RBP	4.1	□□□□□ -1.75
SMG6-208	ENST00000570874	ATP8B2	P98198	1209 aa		4.1	□□□□□ -1.75
SMG6-208	ENST00000570874	PTK7	Q13308	1070 aa		4.1	□□□□□ -1.75
SMG6-208	ENST00000570874	SMC1A	Q14683	1233 aa	Known RBP	4.1	□□□□□ -1.75
SMG6-208	ENST00000570874	TTC31	Q49AM3	519 aa	Predicted RBP	4.1	□□□□□ -1.75
SMG6-208	ENST00000570874	PARP10	Q53GL7	1025 aa		4.1	□□□□□ -1.75
SMG6-208	ENST00000570874	DNAJC21	Q5F1R6	531 aa	Known RBP	4.1	□□□□□ -1.75
SMG6-208	ENST00000570874	EPHA10	Q5JZY3	1008 aa		4.1	□□□□□ -1.75
SMG6-208	ENST00000570874	FAM182B	Q5T319	152 aa		4.1	□□□□□ -1.75
SMG6-208	ENST00000570874	NYAP1	Q6ZVC0	841 aa		4.1	□□□□□ -1.75
SMG6-208	ENST00000570874	PPP1R42	Q7Z4L9	355 aa		4.1	□□□□□ -1.75
SMG6-208	ENST00000570874	JAML	Q86YT9	394 aa		4.1	□□□□□ -1.75
SMG6-208	ENST00000570874	PLEKHM2	Q8IWE5	1019 aa		4.1	□□□□□ -1.75
SMG6-208	ENST00000570874	RPAP2	Q8IXW5	612 aa	Predicted RBP	4.1	□□□□□ -1.75
SMG6-208	ENST00000570874	NKAIN3	Q8N8D7	197 aa		4.1	□□□□□ -1.75
SMG6-208	ENST00000570874	MARCH10	Q8NA82	808 aa	Predicted RBP	4.1	□□□□□ -1.75
SMG6-208	ENST00000570874	MNS1	Q8NEH6	495 aa		4.1	□□□□□ -1.75
SMG6-208	ENST00000570874	ZFPM2	Q8WW38	1151 aa		4.1	□□□□□ -1.75
SMG6-208	ENST00000570874	TBC1D20	Q96BZ9	403 aa		4.1	□□□□□ -1.75
SMG6-208	ENST00000570874	SYTL4	Q96C24	671 aa	Predicted RBP	4.1	□□□□□ -1.75
SMG6-208	ENST00000570874	GCC1	Q96CN9	775 aa		4.1	□□□□□ -1.75
SMG6-208	ENST00000570874	KAZALD1	Q96I82	304 aa		4.1	□□□□□ -1.75
SMG6-208	ENST00000570874	CCDC94	Q9BW85	323 aa	Predicted RBP	4.1	□□□□□ -1.75
SMG6-208	ENST00000570874	SLC4A5	Q9BY07	1137 aa		4.1	□□□□□ -1.75
SMG6-208	ENST00000570874	RBCK1	Q9BYM8	510 aa		4.1	□□□□□ -1.75
SMG6-208	ENST00000570874	TRIM6	Q9C030	488 aa	Predicted RBP	4.1	□□□□□ -1.75
SMG6-208	ENST00000570874	SRCIN1	Q9C0H9	1055 aa		4.1	□□□□□ -1.75
SMG6-208	ENST00000570874	UTP6	Q9NYH9	597 aa	Known RBP	4.1	□□□□□ -1.75
SMG6-208	ENST00000570874	TMOD3	Q9NYL9	352 aa		4.1	□□□□□ -1.75
SMG6-208	ENST00000570874	C9orf78	Q9NZ63	289 aa	Predicted RBP	4.1	□□□□□ -1.75
SMG6-208	ENST00000570874	RABL2B	Q9UNT1	228 aa		4.1	□□□□□ -1.75
SMG6-208	ENST00000570874	PA2G4	Q9UQ80	394 aa	Known RBP	4.1	□□□□□ -1.75
SMG6-208	ENST00000570874	DAAM1	Q9Y4D1	1078 aa		4.1	□□□□□ -1.75
SMG6-208	ENST00000570874	PCDHGB7	Q9Y5F8	929 aa		4.1	□□□□□ -1.75
SMG6-208	ENST00000570874	MYH2	Q9UKX2	1941 aa		4.09	□□□□□ -1.75
SMG6-208	ENST00000570874	C2orf72	A6NCS6	295 aa		4.09	□□□□□ -1.75
SMG6-208	ENST00000570874	NEURL1B	A8MQ27	555 aa		4.09	□□□□□ -1.75
SMG6-208	ENST00000570874	SMTNL1	A8MU46	457 aa		4.09	□□□□□ -1.75
SMG6-208	ENST00000570874	C19orf81	C9J6K1	198 aa		4.09	□□□□□ -1.75
SMG6-208	ENST00000570874	CTAGE5	O15320	804 aa		4.09	□□□□□ -1.75
SMG6-208	ENST00000570874	TREH	O43280	583 aa		4.09	□□□□□ -1.75
SMG6-208	ENST00000570874	KCNQ2	O43526	872 aa		4.09	□□□□□ -1.75
SMG6-208	ENST00000570874	BAIAP3	O94812	1187 aa		4.09	□□□□□ -1.75
SMG6-208	ENST00000570874	SSB	P05455	408 aa	Known RBP eCLIP	4.09	□□□□□ -1.75
SMG6-208	ENST00000570874	SLC5A1	P13866	664 aa		4.09	□□□□□ -1.75
SMG6-208	ENST00000570874	VARS	P26640	1264 aa	Known RBP	4.09	□□□□□ -1.75
SMG6-208	ENST00000570874	HAL	P42357	657 aa		4.09	□□□□□ -1.75
SMG6-208	ENST00000570874	PRIM1	P49642	420 aa	Known RBP	4.09	□□□□□ -1.75
SMG6-208	ENST00000570874	KCNQ4	P56696	695 aa		4.09	□□□□□ -1.75
SMG6-208	ENST00000570874	PURA	Q00577	322 aa	Known RBP	4.09	□□□□□ -1.75
SMG6-208	ENST00000570874	MCL1	Q07820	350 aa		4.09	□□□□□ -1.75
SMG6-208	ENST00000570874	RASA3	Q14644	834 aa		4.09	□□□□□ -1.75
SMG6-208	ENST00000570874	ECM1	Q16610	540 aa		4.09	□□□□□ -1.75
SMG6-208	ENST00000570874	QPCT	Q16769	361 aa		4.09	□□□□□ -1.75
SMG6-208	ENST00000570874	FAM98C	Q17RN3	349 aa	Known RBP	4.09	□□□□□ -1.75
SMG6-208	ENST00000570874	LMBRD2	Q68DH5	695 aa	Predicted RBP	4.09	□□□□□ -1.75
SMG6-208	ENST00000570874	ALKBH2	Q6NS38	261 aa		4.09	□□□□□ -1.75
SMG6-208	ENST00000570874	RSBN1L	Q6PCB5	846 aa	Predicted RBP	4.09	□□□□□ -1.75
SMG6-208	ENST00000570874	C16orf86	Q6ZW13	317 aa		4.09	□□□□□ -1.75
SMG6-208	ENST00000570874	SMIM5	Q71RC9	77 aa		4.09	□□□□□ -1.75
SMG6-208	ENST00000570874	TMC7	Q7Z402	723 aa		4.09	□□□□□ -1.75
SMG6-208	ENST00000570874	ANKMY2	Q8IV38	441 aa		4.09	□□□□□ -1.75
SMG6-208	ENST00000570874	UNC5CL	Q8IV45	518 aa		4.09	□□□□□ -1.75
SMG6-208	ENST00000570874	OR8H2	Q8N162	312 aa		4.09	□□□□□ -1.75
SMG6-208	ENST00000570874	TEX9	Q8N6V9	391 aa		4.09	□□□□□ -1.75
SMG6-208	ENST00000570874	PNMA1	Q8ND90	353 aa		4.09	□□□□□ -1.75

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