RNA–Protein interactions for RNA: ENST00000570756.5

SMG6-207, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 2,426 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-207ENST00000570756 KIAA1328Q86T90 577 aa17.31■□□□□ 0.36
SMG6-207ENST00000570756 ZSWIM5Q9P217 1185 aa17.31■□□□□ 0.36
SMG6-207ENST00000570756 LUC7L2Q9Y383 392 aaKnown RBP17.31■□□□□ 0.36
SMG6-207ENST00000570756 SRGAP2O75044 1071 aa17.3■□□□□ 0.36
SMG6-207ENST00000570756 IPO7O95373 1038 aaKnown RBP17.3■□□□□ 0.36
SMG6-207ENST00000570756 XBP1P17861 261 aa17.3■□□□□ 0.36
SMG6-207ENST00000570756 CASP1P29466 404 aa17.3■□□□□ 0.36
SMG6-207ENST00000570756 HSPA1LP34931 641 aa17.3■□□□□ 0.36
SMG6-207ENST00000570756 B4GALNT4Q76KP1 1039 aa17.3■□□□□ 0.36
SMG6-207ENST00000570756 CRACR2BQ8N4Y2 399 aaPredicted RBP17.3■□□□□ 0.36
SMG6-207ENST00000570756 AENQ8WTP8 325 aaKnown RBP17.3■□□□□ 0.36
SMG6-207ENST00000570756 DNAJC7Q99615 494 aa17.3■□□□□ 0.36
SMG6-207ENST00000570756 PYM1Q9BRP8 204 aaKnown RBP17.3■□□□□ 0.36
SMG6-207ENST00000570756 LRP6O75581 1613 aa17.3■□□□□ 0.36
SMG6-207ENST00000570756 AHDC1Q5TGY3 1603 aaPredicted RBP17.3■□□□□ 0.36
SMG6-207ENST00000570756 ZMYND10O75800 440 aa17.3■□□□□ 0.36
SMG6-207ENST00000570756 GNGT1P63211 74 aa17.3■□□□□ 0.36
SMG6-207ENST00000570756 SPATS2Q86XZ4 545 aaKnown RBP17.3■□□□□ 0.36
SMG6-207ENST00000570756 COL16A1Q07092 1604 aaPredicted RBP17.3■□□□□ 0.36
SMG6-207ENST00000570756 CHRM1P11229 460 aaPredicted RBP17.29■□□□□ 0.36
SMG6-207ENST00000570756 MAP2K2P36507 400 aa17.29■□□□□ 0.36
SMG6-207ENST00000570756 MCAMP43121 646 aa17.29■□□□□ 0.36
SMG6-207ENST00000570756 RCAN1P53805 252 aa17.29■□□□□ 0.36
SMG6-207ENST00000570756 AIDAQ96BJ3 306 aa17.29■□□□□ 0.36
SMG6-207ENST00000570756 ERICH2A1L162 156 aa17.29■□□□□ 0.36
SMG6-207ENST00000570756 CYLC1P35663 651 aaPredicted RBP17.29■□□□□ 0.36
SMG6-207ENST00000570756 HERVK_113P62684 666 aa17.29■□□□□ 0.36
SMG6-207ENST00000570756 TTLL7Q6ZT98 887 aa17.29■□□□□ 0.36
SMG6-207ENST00000570756 GSPT2Q8IYD1 628 aaKnown RBP17.29■□□□□ 0.36
SMG6-207ENST00000570756 CNPY4Q8N129 248 aa17.29■□□□□ 0.36
SMG6-207ENST00000570756 TMTC2Q8N394 836 aa17.29■□□□□ 0.36
SMG6-207ENST00000570756 OXER1Q8TDS5 423 aa17.29■□□□□ 0.36
SMG6-207ENST00000570756 ZNF512BQ96KM6 892 aaPredicted RBP17.29■□□□□ 0.36
SMG6-207ENST00000570756 RMND1Q9NWS8 449 aa17.29■□□□□ 0.36
SMG6-207ENST00000570756 CHD4Q14839 1912 aa17.28■□□□□ 0.36
SMG6-207ENST00000570756 GRIN2DO15399 1336 aa17.28■□□□□ 0.36
SMG6-207ENST00000570756 A0A1W2PQC6 194 aa17.28■□□□□ 0.36
SMG6-207ENST00000570756 TTC26A0AVF1 554 aa17.28■□□□□ 0.36
SMG6-207ENST00000570756 NUTM2BA6NNL0 878 aaPredicted RBP17.28■□□□□ 0.36
SMG6-207ENST00000570756 NUTM2EB1AL46 878 aaPredicted RBP17.28■□□□□ 0.36
SMG6-207ENST00000570756 NBPF26B4DH59 902 aa17.28■□□□□ 0.36
SMG6-207ENST00000570756 IDH1O75874 414 aaKnown RBP17.28■□□□□ 0.36
SMG6-207ENST00000570756 MYBL2P10244 700 aa17.28■□□□□ 0.36
SMG6-207ENST00000570756 MMP14P50281 582 aa17.28■□□□□ 0.36
SMG6-207ENST00000570756 WTAPQ15007 396 aa17.28■□□□□ 0.36
SMG6-207ENST00000570756 NBPF10Q6P3W6 841 aaKnown RBP17.28■□□□□ 0.36
SMG6-207ENST00000570756 PAXIP1Q6ZW49 1069 aaPredicted RBP17.28■□□□□ 0.36
SMG6-207ENST00000570756 RPAINQ86UA6 219 aa17.28■□□□□ 0.36
SMG6-207ENST00000570756 FNBP4Q8N3X1 1017 aaPredicted RBP17.28■□□□□ 0.36
SMG6-207ENST00000570756 NBPF15Q8N660 670 aa17.28■□□□□ 0.36
SMG6-207ENST00000570756 NELFBQ8WX92 580 aa17.28■□□□□ 0.36
SMG6-207ENST00000570756 RUFY1Q96T51 708 aa17.28■□□□□ 0.36
SMG6-207ENST00000570756 NAPBQ9H115 298 aa17.28■□□□□ 0.36
SMG6-207ENST00000570756 GNL3LQ9NVN8 582 aaKnown RBP17.28■□□□□ 0.36
SMG6-207ENST00000570756 NLRP2Q9NX02 1062 aa17.28■□□□□ 0.36
SMG6-207ENST00000570756 ZNF532Q9HCE3 1301 aa17.28■□□□□ 0.36
SMG6-207ENST00000570756 KIAA0754O94854 1291 aa17.28■□□□□ 0.36
SMG6-207ENST00000570756 CABP4P57796 275 aa17.28■□□□□ 0.36
SMG6-207ENST00000570756 ANKRD18AQ8IVF6 992 aa17.28■□□□□ 0.36
SMG6-207ENST00000570756 SH3GL2Q99962 352 aa17.28■□□□□ 0.36
SMG6-207ENST00000570756 CXorf56Q9H5V9 222 aa17.28■□□□□ 0.36
SMG6-207ENST00000570756 PKD1L3Q7Z443 1732 aa17.27■□□□□ 0.36
SMG6-207ENST00000570756 H7C1D1 291 aa17.27■□□□□ 0.36
SMG6-207ENST00000570756 EPB41P11171 864 aaKnown RBP17.27■□□□□ 0.36
SMG6-207ENST00000570756 MFSD6Q6ZSS7 791 aa17.27■□□□□ 0.36
SMG6-207ENST00000570756 SND1Q7KZF4 910 aaKnown RBP eCLIP17.27■□□□□ 0.36
SMG6-207ENST00000570756 MTA3Q9BTC8 594 aa17.27■□□□□ 0.36
SMG6-207ENST00000570756 JADE2Q9NQC1 790 aa17.27■□□□□ 0.36
SMG6-207ENST00000570756 ZNHIT6Q9NWK9 470 aaKnown RBP17.27■□□□□ 0.36
SMG6-207ENST00000570756 CAPN11Q9UMQ6 739 aa17.27■□□□□ 0.36
SMG6-207ENST00000570756 AKAP11Q9UKA4 1901 aa17.27■□□□□ 0.36
SMG6-207ENST00000570756 RGPD5Q99666 1765 aa17.27■□□□□ 0.35
SMG6-207ENST00000570756 IDEP14735 1019 aa17.27■□□□□ 0.35
SMG6-207ENST00000570756 ATP6V1AP38606 617 aa17.27■□□□□ 0.35
SMG6-207ENST00000570756 ITIH3Q06033 890 aa17.27■□□□□ 0.35
SMG6-207ENST00000570756 AKNAD1Q5T1N1 836 aa17.27■□□□□ 0.35
SMG6-207ENST00000570756 ZNF658Q5TYW1 1059 aaPredicted RBP17.27■□□□□ 0.35
SMG6-207ENST00000570756 FBXW10Q5XX13 1052 aa17.27■□□□□ 0.35
SMG6-207ENST00000570756 ALS2CLQ60I27 953 aa17.27■□□□□ 0.35
SMG6-207ENST00000570756 CCDC82Q8N4S0 544 aa17.27■□□□□ 0.35
SMG6-207ENST00000570756 MMGT1Q8N4V1 131 aa17.27■□□□□ 0.35
SMG6-207ENST00000570756 PRPF38AQ8NAV1 312 aaKnown RBP17.27■□□□□ 0.35
SMG6-207ENST00000570756 STRBPQ96SI9 672 aaKnown RBP17.27■□□□□ 0.35
SMG6-207ENST00000570756 LGALS16A8MUM7 142 aa17.26■□□□□ 0.35
SMG6-207ENST00000570756 PATL2C9JE40 543 aaKnown RBP17.26■□□□□ 0.35
SMG6-207ENST00000570756 GTPBP6O43824 516 aaPredicted RBP17.26■□□□□ 0.35
SMG6-207ENST00000570756 PDE6AP16499 860 aa17.26■□□□□ 0.35
SMG6-207ENST00000570756 KRT2P35908 639 aa17.26■□□□□ 0.35
SMG6-207ENST00000570756 SKOR1P84550 965 aa17.26■□□□□ 0.35
SMG6-207ENST00000570756 IFIT5Q13325 482 aaKnown RBP17.26■□□□□ 0.35
SMG6-207ENST00000570756 KCNV1Q6PIU1 500 aa17.26■□□□□ 0.35
SMG6-207ENST00000570756 MB21D1Q8N884 522 aa17.26■□□□□ 0.35
SMG6-207ENST00000570756 ZBTB3Q9H5J0 574 aa17.26■□□□□ 0.35
SMG6-207ENST00000570756 XDHP47989 1333 aa17.26■□□□□ 0.35
SMG6-207ENST00000570756 COBLO75128 1261 aa17.26■□□□□ 0.35
SMG6-207ENST00000570756 ADAMTS2O95450 1211 aa17.26■□□□□ 0.35
SMG6-207ENST00000570756 C2orf54Q08AI8 447 aa17.26■□□□□ 0.35
SMG6-207ENST00000570756 METTL24Q5JXM2 366 aa17.26■□□□□ 0.35
SMG6-207ENST00000570756 CCDC170Q8IYT3 715 aa17.26■□□□□ 0.35
SMG6-207ENST00000570756 CABS1Q96KC9 395 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms