RNA–Protein interactions for RNA: ENST00000569422.1

LINC00558-201, long intergenic non-protein coding RNA 558, humanhuman

TSL 1 (best) BASIC

Gene LINC00558, Length 3,163 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00558-201ENST00000569422 SEMA3EO15041 775 aa9.93□□□□□ -0.82
LINC00558-201ENST00000569422 SLFN14P0C7P3 912 aa9.93□□□□□ -0.82
LINC00558-201ENST00000569422 KIF5BP33176 963 aa9.93□□□□□ -0.82
LINC00558-201ENST00000569422 SARSP49591 514 aaKnown RBP9.93□□□□□ -0.82
LINC00558-201ENST00000569422 PICALMQ13492 652 aa9.93□□□□□ -0.82
LINC00558-201ENST00000569422 CUL4BQ13620 913 aa9.93□□□□□ -0.82
LINC00558-201ENST00000569422 MTF1Q14872 753 aa9.93□□□□□ -0.82
LINC00558-201ENST00000569422 INF2Q27J81 1249 aa9.93□□□□□ -0.82
LINC00558-201ENST00000569422 ERCC6LQ2NKX8 1250 aa9.93□□□□□ -0.82
LINC00558-201ENST00000569422 TYW1BQ6NUM6 668 aa9.93□□□□□ -0.82
LINC00558-201ENST00000569422 RINLQ6ZS11 566 aa9.93□□□□□ -0.82
LINC00558-201ENST00000569422 ZNF579Q8NAF0 562 aaKnown RBP9.93□□□□□ -0.82
LINC00558-201ENST00000569422 ANKRD7Q92527 254 aa9.93□□□□□ -0.82
LINC00558-201ENST00000569422 CCDC194A0A1B0GVG4 234 aa9.93□□□□□ -0.82
LINC00558-201ENST00000569422 ORC4O43929 436 aa9.93□□□□□ -0.82
LINC00558-201ENST00000569422 RCAN1P53805 252 aa9.93□□□□□ -0.82
LINC00558-201ENST00000569422 VPS72Q15906 364 aa9.93□□□□□ -0.82
LINC00558-201ENST00000569422 IL17AQ16552 155 aa9.93□□□□□ -0.82
LINC00558-201ENST00000569422 SPECC1LQ69YQ0 1117 aa9.93□□□□□ -0.82
LINC00558-201ENST00000569422 TOGARAM2Q6ZUX3 1019 aa9.93□□□□□ -0.82
LINC00558-201ENST00000569422 ENOX1Q8TC92 643 aaKnown RBP9.93□□□□□ -0.82
LINC00558-201ENST00000569422 ZBTB9Q96C00 473 aa9.93□□□□□ -0.82
LINC00558-201ENST00000569422 SYNRGQ9UMZ2 1314 aa9.92□□□□□ -0.82
LINC00558-201ENST00000569422 SLU7O95391 586 aaKnown RBP9.92□□□□□ -0.82
LINC00558-201ENST00000569422 BAG3O95817 575 aa9.92□□□□□ -0.82
LINC00558-201ENST00000569422 GPSM2P81274 684 aa9.92□□□□□ -0.82
LINC00558-201ENST00000569422 MAPK8IP2Q13387 824 aaPredicted RBP9.92□□□□□ -0.82
LINC00558-201ENST00000569422 PFKFB3Q16875 520 aaPredicted RBP9.92□□□□□ -0.82
LINC00558-201ENST00000569422 C12orf60Q5U649 245 aa9.92□□□□□ -0.82
LINC00558-201ENST00000569422 TSHZ1Q6ZSZ6 1077 aa9.92□□□□□ -0.82
LINC00558-201ENST00000569422 BLIDQ8IZY5 108 aa9.92□□□□□ -0.82
LINC00558-201ENST00000569422 VPS16Q9H269 839 aa9.92□□□□□ -0.82
LINC00558-201ENST00000569422 BAZ2AQ9UIF9 1905 aaKnown RBP9.92□□□□□ -0.82
LINC00558-201ENST00000569422 NID2Q14112 1375 aa9.92□□□□□ -0.82
LINC00558-201ENST00000569422 BTDP43251 543 aa9.92□□□□□ -0.82
LINC00558-201ENST00000569422 DPYDQ12882 1025 aa9.92□□□□□ -0.82
LINC00558-201ENST00000569422 GRAPQ13588 217 aa9.92□□□□□ -0.82
LINC00558-201ENST00000569422 USP17L2Q6R6M4 530 aa9.92□□□□□ -0.82
LINC00558-201ENST00000569422 GRAPLQ8TC17 118 aaPredicted RBP9.92□□□□□ -0.82
LINC00558-201ENST00000569422 FERMT2Q96AC1 680 aa9.92□□□□□ -0.82
LINC00558-201ENST00000569422 DDX60Q8IY21 1712 aaKnown RBP9.92□□□□□ -0.82
LINC00558-201ENST00000569422 IRF6O14896 467 aa9.91□□□□□ -0.82
LINC00558-201ENST00000569422 GNG11P61952 73 aa9.91□□□□□ -0.82
LINC00558-201ENST00000569422 SEMA3FQ13275 785 aa9.91□□□□□ -0.82
LINC00558-201ENST00000569422 ZNF804AQ7Z570 1209 aa9.91□□□□□ -0.82
LINC00558-201ENST00000569422 TEX11Q8IYF3 940 aa9.91□□□□□ -0.82
LINC00558-201ENST00000569422 IQUBQ8NA54 791 aa9.91□□□□□ -0.82
LINC00558-201ENST00000569422 WDR66Q8TBY9 1149 aa9.91□□□□□ -0.82
LINC00558-201ENST00000569422 UIMC1Q96RL1 719 aa9.91□□□□□ -0.82
LINC00558-201ENST00000569422 IRX2Q9BZI1 471 aaPredicted RBP9.91□□□□□ -0.82
LINC00558-201ENST00000569422 UBA5Q9GZZ9 404 aa9.91□□□□□ -0.82
LINC00558-201ENST00000569422 LZTFL1Q9NQ48 299 aa9.91□□□□□ -0.82
LINC00558-201ENST00000569422 LRRC4BQ9NT99 713 aa9.91□□□□□ -0.82
LINC00558-201ENST00000569422 GDAQ9Y2T3 454 aa9.91□□□□□ -0.82
LINC00558-201ENST00000569422 PSDA5PKW4 1024 aaPredicted RBP9.91□□□□□ -0.82
LINC00558-201ENST00000569422 SOWAHDA6NJG2 315 aa9.91□□□□□ -0.82
LINC00558-201ENST00000569422 FGRP09769 529 aa9.91□□□□□ -0.82
LINC00558-201ENST00000569422 ATP2C1P98194 919 aaPredicted RBP9.91□□□□□ -0.82
LINC00558-201ENST00000569422 IGSF22Q8N9C0 903 aa9.91□□□□□ -0.82
LINC00558-201ENST00000569422 TNFRSF25Q93038 417 aa9.91□□□□□ -0.82
LINC00558-201ENST00000569422 TMEM47Q9BQJ4 181 aa9.91□□□□□ -0.82
LINC00558-201ENST00000569422 EPC1Q9H2F5 836 aa9.91□□□□□ -0.82
LINC00558-201ENST00000569422 PPP2R2CQ9Y2T4 447 aa9.91□□□□□ -0.82
LINC00558-201ENST00000569422 XDHP47989 1333 aa9.91□□□□□ -0.82
LINC00558-201ENST00000569422 MYH2Q9UKX2 1941 aa9.91□□□□□ -0.82
LINC00558-201ENST00000569422 ZNF18P17022 549 aa9.91□□□□□ -0.82
LINC00558-201ENST00000569422 STAT6P42226 847 aa9.91□□□□□ -0.82
LINC00558-201ENST00000569422 MFSD14BQ5SR56 506 aa9.91□□□□□ -0.82
LINC00558-201ENST00000569422 RC3H1Q5TC82 1133 aaKnown RBP9.91□□□□□ -0.82
LINC00558-201ENST00000569422 NT5DC1Q5TFE4 455 aa9.91□□□□□ -0.82
LINC00558-201ENST00000569422 WWC2Q6AWC2 1192 aa9.91□□□□□ -0.82
LINC00558-201ENST00000569422 PRR5LQ6MZQ0 368 aa9.91□□□□□ -0.82
LINC00558-201ENST00000569422 PPFIBP1Q86W92 1011 aa9.91□□□□□ -0.82
LINC00558-201ENST00000569422 CLEC10AQ8IUN9 316 aa9.91□□□□□ -0.82
LINC00558-201ENST00000569422 TC2NQ8N9U0 490 aa9.91□□□□□ -0.82
LINC00558-201ENST00000569422 ZSWIM4Q9H7M6 989 aa9.91□□□□□ -0.82
LINC00558-201ENST00000569422 A0A0U1RQJ8 604 aa9.9□□□□□ -0.82
LINC00558-201ENST00000569422 KLRF2D3W0D1 207 aa9.9□□□□□ -0.82
LINC00558-201ENST00000569422 CYTH3O43739 400 aa9.9□□□□□ -0.82
LINC00558-201ENST00000569422 PCP11498 1178 aaKnown RBP9.9□□□□□ -0.82
LINC00558-201ENST00000569422 ETF1P62495 437 aaKnown RBP9.9□□□□□ -0.82
LINC00558-201ENST00000569422 ATP2B2Q01814 1243 aa9.9□□□□□ -0.82
LINC00558-201ENST00000569422 RBL2Q08999 1139 aa9.9□□□□□ -0.82
LINC00558-201ENST00000569422 LETM2Q2VYF4 491 aa9.9□□□□□ -0.82
LINC00558-201ENST00000569422 ATRIPQ8WXE1 791 aa9.9□□□□□ -0.82
LINC00558-201ENST00000569422 MTRQ99707 1265 aa9.9□□□□□ -0.82
LINC00558-201ENST00000569422 TMEM60Q9H2L4 133 aa9.9□□□□□ -0.82
LINC00558-201ENST00000569422 TAB2Q9NYJ8 693 aa9.9□□□□□ -0.82
LINC00558-201ENST00000569422 MAD2L2Q9UI95 211 aa9.9□□□□□ -0.82
LINC00558-201ENST00000569422 FRMPD2Q68DX3 1309 aaPredicted RBP9.9□□□□□ -0.82
LINC00558-201ENST00000569422 SLURP2P0DP57 97 aa9.9□□□□□ -0.82
LINC00558-201ENST00000569422 NAPAP54920 295 aa9.9□□□□□ -0.82
LINC00558-201ENST00000569422 SLC35G1Q2M3R5 365 aa9.9□□□□□ -0.82
LINC00558-201ENST00000569422 KMT5BQ4FZB7 885 aa9.9□□□□□ -0.82
LINC00558-201ENST00000569422 SBK1Q52WX2 424 aa9.9□□□□□ -0.82
LINC00558-201ENST00000569422 SPATA1Q5VX52 437 aa9.9□□□□□ -0.82
LINC00558-201ENST00000569422 REXO1L1PQ8IX06 675 aa9.9□□□□□ -0.82
LINC00558-201ENST00000569422 CEP120Q8N960 986 aa9.9□□□□□ -0.82
LINC00558-201ENST00000569422 TRIML1Q8N9V2 468 aa9.9□□□□□ -0.82
LINC00558-201ENST00000569422 MNS1Q8NEH6 495 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms