RNA–Protein interactions for RNA: ENST00000569278.1

CHRFAM7A-206, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 3

Gene CHRFAM7A, Length 464 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-206ENST00000569278 DNM1LO00429 736 aa13.54□□□□□ -0.24
CHRFAM7A-206ENST00000569278 USP14P54578 494 aa13.54□□□□□ -0.24
CHRFAM7A-206ENST00000569278 SNX17Q15036 470 aa13.54□□□□□ -0.24
CHRFAM7A-206ENST00000569278 AACSQ86V21 672 aa13.54□□□□□ -0.24
CHRFAM7A-206ENST00000569278 ITPRIPQ8IWB1 547 aa13.54□□□□□ -0.24
CHRFAM7A-206ENST00000569278 LCORLQ8N3X6 602 aa13.54□□□□□ -0.24
CHRFAM7A-206ENST00000569278 SDR42E1Q8WUS8 393 aa13.54□□□□□ -0.24
CHRFAM7A-206ENST00000569278 SENP6Q9GZR1 1112 aaPredicted RBP13.54□□□□□ -0.24
CHRFAM7A-206ENST00000569278 PLXNA1Q9UIW2 1896 aa13.53□□□□□ -0.24
CHRFAM7A-206ENST00000569278 MYH7P12883 1935 aa13.53□□□□□ -0.24
CHRFAM7A-206ENST00000569278 ADORA2AP29274 412 aa13.53□□□□□ -0.24
CHRFAM7A-206ENST00000569278 RTP1P59025 263 aa13.53□□□□□ -0.24
CHRFAM7A-206ENST00000569278 CCNA1P78396 465 aa13.53□□□□□ -0.24
CHRFAM7A-206ENST00000569278 WDR78Q5VTH9 848 aa13.53□□□□□ -0.24
CHRFAM7A-206ENST00000569278 MFSD14CQ5VZR4 134 aa13.53□□□□□ -0.24
CHRFAM7A-206ENST00000569278 ANO1Q5XXA6 986 aa13.53□□□□□ -0.24
CHRFAM7A-206ENST00000569278 CENPQQ7L2Z9 268 aaPredicted RBP13.53□□□□□ -0.24
CHRFAM7A-206ENST00000569278 IL1RAPL2Q9NP60 686 aa13.53□□□□□ -0.24
CHRFAM7A-206ENST00000569278 DCP1AQ9NPI6 582 aaPredicted RBP13.53□□□□□ -0.24
CHRFAM7A-206ENST00000569278 REV3LO60673 3130 aa13.53□□□□□ -0.24
CHRFAM7A-206ENST00000569278 CHD7Q9P2D1 2997 aa13.53□□□□□ -0.24
CHRFAM7A-206ENST00000569278 ZNFX1Q9P2E3 1918 aaKnown RBP13.52□□□□□ -0.24
CHRFAM7A-206ENST00000569278 ERCC3P19447 782 aa13.52□□□□□ -0.25
CHRFAM7A-206ENST00000569278 MAP3K12Q12852 859 aa13.52□□□□□ -0.25
CHRFAM7A-206ENST00000569278 C9orf50Q5SZB4 431 aa13.52□□□□□ -0.25
CHRFAM7A-206ENST00000569278 GJC2Q5T442 439 aaPredicted RBP13.52□□□□□ -0.25
CHRFAM7A-206ENST00000569278 OLFML2BQ68BL8 750 aa13.52□□□□□ -0.25
CHRFAM7A-206ENST00000569278 TTC6Q86TZ1 520 aa13.52□□□□□ -0.25
CHRFAM7A-206ENST00000569278 CERS3Q8IU89 383 aa13.52□□□□□ -0.25
CHRFAM7A-206ENST00000569278 SIRT2Q8IXJ6 389 aa13.52□□□□□ -0.25
CHRFAM7A-206ENST00000569278 DYNLL2Q96FJ2 89 aa13.52□□□□□ -0.25
CHRFAM7A-206ENST00000569278 COL25A1Q9BXS0 654 aaPredicted RBP13.52□□□□□ -0.25
CHRFAM7A-206ENST00000569278 SPATC1LQ9H0A9 340 aa13.52□□□□□ -0.25
CHRFAM7A-206ENST00000569278 ZNF532Q9HCE3 1301 aa13.52□□□□□ -0.25
CHRFAM7A-206ENST00000569278 SMCHD1A6NHR9 2005 aa13.51□□□□□ -0.25
CHRFAM7A-206ENST00000569278 ROBO3Q96MS0 1386 aa13.51□□□□□ -0.25
CHRFAM7A-206ENST00000569278 MAGEB6P1A0A0J9YX57 407 aa13.51□□□□□ -0.25
CHRFAM7A-206ENST00000569278 PRKAB2O43741 272 aa13.51□□□□□ -0.25
CHRFAM7A-206ENST00000569278 GTPBP6O43824 516 aaPredicted RBP13.51□□□□□ -0.25
CHRFAM7A-206ENST00000569278 AKR1B1P15121 316 aa13.51□□□□□ -0.25
CHRFAM7A-206ENST00000569278 ITGB8P26012 769 aa13.51□□□□□ -0.25
CHRFAM7A-206ENST00000569278 FAM47AQ5JRC9 791 aa13.51□□□□□ -0.25
CHRFAM7A-206ENST00000569278 PRAMEF19Q5SWL8 479 aa13.51□□□□□ -0.25
CHRFAM7A-206ENST00000569278 FAM109BQ6ICB4 259 aaPredicted RBP13.51□□□□□ -0.25
CHRFAM7A-206ENST00000569278 SH3RF1Q7Z6J0 888 aa13.51□□□□□ -0.25
CHRFAM7A-206ENST00000569278 CCAR1Q8IX12 1150 aaKnown RBP13.51□□□□□ -0.25
CHRFAM7A-206ENST00000569278 PANK1Q8TE04 598 aa13.51□□□□□ -0.25
CHRFAM7A-206ENST00000569278 ATG4CQ96DT6 458 aa13.51□□□□□ -0.25
CHRFAM7A-206ENST00000569278 CRBNQ96SW2 442 aa13.51□□□□□ -0.25
CHRFAM7A-206ENST00000569278 PDLIM7Q9NR12 457 aa13.51□□□□□ -0.25
CHRFAM7A-206ENST00000569278 XIRP2A4UGR9 3374 aa13.51□□□□□ -0.25
CHRFAM7A-206ENST00000569278 CYP2D7A0A087X1C5 515 aa13.5□□□□□ -0.25
CHRFAM7A-206ENST00000569278 TRIM43BA6NCK2 446 aa13.5□□□□□ -0.25
CHRFAM7A-206ENST00000569278 MSCO60682 206 aa13.5□□□□□ -0.25
CHRFAM7A-206ENST00000569278 ATP2B2Q01814 1243 aa13.5□□□□□ -0.25
CHRFAM7A-206ENST00000569278 TRIM60Q495X7 471 aa13.5□□□□□ -0.25
CHRFAM7A-206ENST00000569278 SLC9C2Q5TAH2 1124 aa13.5□□□□□ -0.25
CHRFAM7A-206ENST00000569278 TMED8Q6PL24 325 aaPredicted RBP13.5□□□□□ -0.25
CHRFAM7A-206ENST00000569278 FTSJ3Q8IY81 847 aaKnown RBP13.5□□□□□ -0.25
CHRFAM7A-206ENST00000569278 SHCBP1Q8NEM2 672 aa13.5□□□□□ -0.25
CHRFAM7A-206ENST00000569278 RHPN1Q8TCX5 695 aa13.5□□□□□ -0.25
CHRFAM7A-206ENST00000569278 TRIM43Q96BQ3 446 aaPredicted RBP13.5□□□□□ -0.25
CHRFAM7A-206ENST00000569278 FAM161BQ96MY7 647 aa13.5□□□□□ -0.25
CHRFAM7A-206ENST00000569278 TSHZ2Q9NRE2 1034 aa13.5□□□□□ -0.25
CHRFAM7A-206ENST00000569278 MCM9Q9NXL9 1143 aa13.5□□□□□ -0.25
CHRFAM7A-206ENST00000569278 IVNS1ABPQ9Y6Y0 642 aa13.5□□□□□ -0.25
CHRFAM7A-206ENST00000569278 SEPT4O43236 478 aa13.49□□□□□ -0.25
CHRFAM7A-206ENST00000569278 GLRX3O76003 335 aaKnown RBP13.49□□□□□ -0.25
CHRFAM7A-206ENST00000569278 POLR3DP05423 398 aaPredicted RBP13.49□□□□□ -0.25
CHRFAM7A-206ENST00000569278 CNGA1P29973 690 aa13.49□□□□□ -0.25
CHRFAM7A-206ENST00000569278 COG2Q14746 738 aa13.49□□□□□ -0.25
CHRFAM7A-206ENST00000569278 TMEM132BQ14DG7 1078 aa13.49□□□□□ -0.25
CHRFAM7A-206ENST00000569278 SHHQ15465 462 aa13.49□□□□□ -0.25
CHRFAM7A-206ENST00000569278 SLC39A5Q6ZMH5 540 aa13.49□□□□□ -0.25
CHRFAM7A-206ENST00000569278 SPICE1Q8N0Z3 855 aa13.49□□□□□ -0.25
CHRFAM7A-206ENST00000569278 REPS2Q8NFH8 660 aa13.49□□□□□ -0.25
CHRFAM7A-206ENST00000569278 LENG1Q96BZ8 264 aaPredicted RBP13.49□□□□□ -0.25
CHRFAM7A-206ENST00000569278 MAML3Q96JK9 1138 aa13.49□□□□□ -0.25
CHRFAM7A-206ENST00000569278 TANGO6Q9C0B7 1094 aa13.49□□□□□ -0.25
CHRFAM7A-206ENST00000569278 TTYH1Q9H313 450 aaPredicted RBP13.49□□□□□ -0.25
CHRFAM7A-206ENST00000569278 ARMT1Q9H993 441 aa13.49□□□□□ -0.25
CHRFAM7A-206ENST00000569278 CWC22Q9HCG8 908 aaKnown RBP13.49□□□□□ -0.25
CHRFAM7A-206ENST00000569278 CABP5Q9NP86 173 aa13.49□□□□□ -0.25
CHRFAM7A-206ENST00000569278 ADAMTS5Q9UNA0 930 aa13.49□□□□□ -0.25
CHRFAM7A-206ENST00000569278 GOLIM4O00461 696 aa13.48□□□□□ -0.25
CHRFAM7A-206ENST00000569278 EPHB4P54760 987 aa13.48□□□□□ -0.25
CHRFAM7A-206ENST00000569278 LRRC41Q15345 812 aa13.48□□□□□ -0.25
CHRFAM7A-206ENST00000569278 TMEM179Q6ZVK1 233 aa13.48□□□□□ -0.25
CHRFAM7A-206ENST00000569278 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.48□□□□□ -0.25
CHRFAM7A-206ENST00000569278 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.48□□□□□ -0.25
CHRFAM7A-206ENST00000569278 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.48□□□□□ -0.25
CHRFAM7A-206ENST00000569278 CRNKL1Q9BZJ0 848 aaKnown RBP13.48□□□□□ -0.25
CHRFAM7A-206ENST00000569278 VCPKMTQ9H867 229 aa13.48□□□□□ -0.25
CHRFAM7A-206ENST00000569278 FBXO28Q9NVF7 368 aa13.48□□□□□ -0.25
CHRFAM7A-206ENST00000569278 ATP11BQ9Y2G3 1177 aa13.48□□□□□ -0.25
CHRFAM7A-206ENST00000569278 TMX2Q9Y320 296 aa13.48□□□□□ -0.25
CHRFAM7A-206ENST00000569278 MPHOSPH10O00566 681 aaKnown RBP13.47□□□□□ -0.25
CHRFAM7A-206ENST00000569278 MBD4O95243 580 aa13.47□□□□□ -0.25
CHRFAM7A-206ENST00000569278 TAL1P17542 331 aaPredicted RBP13.47□□□□□ -0.25
CHRFAM7A-206ENST00000569278 ADD2P35612 726 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms