RNA–Protein interactions for RNA: ENST00000569020.5

CNOT1-215, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-215ENST00000569020 RAD21O60216 631 aa16.38■□□□□ 0.21
CNOT1-215ENST00000569020 SLC25A27O95847 323 aa16.38■□□□□ 0.21
CNOT1-215ENST00000569020 IGHA2P01877 340 aa16.38■□□□□ 0.21
CNOT1-215ENST00000569020 FCER1AP12319 257 aa16.38■□□□□ 0.21
CNOT1-215ENST00000569020 ARRDC4Q8NCT1 418 aa16.38■□□□□ 0.21
CNOT1-215ENST00000569020 TRPV1Q8NER1 839 aa16.38■□□□□ 0.21
CNOT1-215ENST00000569020 COBLO75128 1261 aa16.37■□□□□ 0.21
CNOT1-215ENST00000569020 LRIT3Q3SXY7 679 aa16.37■□□□□ 0.21
CNOT1-215ENST00000569020 GPR153Q6NV75 609 aa16.37■□□□□ 0.21
CNOT1-215ENST00000569020 KBTBD3Q8NAB2 608 aa16.37■□□□□ 0.21
CNOT1-215ENST00000569020 STRBPQ96SI9 672 aaKnown RBP16.37■□□□□ 0.21
CNOT1-215ENST00000569020 ADAMTS5Q9UNA0 930 aa16.37■□□□□ 0.21
CNOT1-215ENST00000569020 KBTBD13C9JR72 458 aa16.36■□□□□ 0.21
CNOT1-215ENST00000569020 SEPT4O43236 478 aa16.36■□□□□ 0.21
CNOT1-215ENST00000569020 ATN1P54259 1190 aaPredicted RBP16.36■□□□□ 0.21
CNOT1-215ENST00000569020 TMEM132BQ14DG7 1078 aa16.36■□□□□ 0.21
CNOT1-215ENST00000569020 SBK1Q52WX2 424 aa16.36■□□□□ 0.21
CNOT1-215ENST00000569020 GIMAP6Q6P9H5 292 aa16.36■□□□□ 0.21
CNOT1-215ENST00000569020 APPBP2Q92624 585 aa16.36■□□□□ 0.21
CNOT1-215ENST00000569020 MAML3Q96JK9 1138 aa16.36■□□□□ 0.21
CNOT1-215ENST00000569020 DCTPP1Q9H773 170 aa16.36■□□□□ 0.21
CNOT1-215ENST00000569020 MKNK2Q9HBH9 465 aa16.36■□□□□ 0.21
CNOT1-215ENST00000569020 SZT2Q5T011 3432 aa16.36■□□□□ 0.21
CNOT1-215ENST00000569020 GSG1L2A8MUP6 293 aa16.35■□□□□ 0.21
CNOT1-215ENST00000569020 MINDY4BA8MYZ0 360 aa16.35■□□□□ 0.21
CNOT1-215ENST00000569020 ZFYP08048 801 aaPredicted RBP16.35■□□□□ 0.21
CNOT1-215ENST00000569020 MDM2Q00987 491 aaPredicted RBP16.35■□□□□ 0.21
CNOT1-215ENST00000569020 KCTD2Q14681 263 aa16.35■□□□□ 0.21
CNOT1-215ENST00000569020 GJC2Q5T442 439 aaPredicted RBP16.35■□□□□ 0.21
CNOT1-215ENST00000569020 RIOX2Q8IUF8 465 aa16.35■□□□□ 0.21
CNOT1-215ENST00000569020 MMP19Q99542 508 aa16.35■□□□□ 0.21
CNOT1-215ENST00000569020 LBHD1Q9BQE6 289 aaPredicted RBP16.35■□□□□ 0.21
CNOT1-215ENST00000569020 FBXO28Q9NVF7 368 aa16.35■□□□□ 0.21
CNOT1-215ENST00000569020 PRKAG2Q9UGJ0 569 aa16.35■□□□□ 0.21
CNOT1-215ENST00000569020 PPP1R9AQ9ULJ8 1098 aa16.35■□□□□ 0.21
CNOT1-215ENST00000569020 LTBP2Q14767 1821 aa16.34■□□□□ 0.21
CNOT1-215ENST00000569020 VWA5AO00534 786 aa16.34■□□□□ 0.21
CNOT1-215ENST00000569020 RNF113AO15541 343 aaKnown RBP16.34■□□□□ 0.21
CNOT1-215ENST00000569020 MYCNP04198 464 aaPredicted RBP16.34■□□□□ 0.21
CNOT1-215ENST00000569020 GNAT2P19087 354 aa16.34■□□□□ 0.21
CNOT1-215ENST00000569020 COPB2P35606 906 aa16.34■□□□□ 0.21
CNOT1-215ENST00000569020 STAT3P40763 770 aa16.34■□□□□ 0.21
CNOT1-215ENST00000569020 LRRFIP1Q32MZ4 808 aaKnown RBP16.34■□□□□ 0.21
CNOT1-215ENST00000569020 FAM83BQ5T0W9 1011 aa16.34■□□□□ 0.21
CNOT1-215ENST00000569020 ANO1Q5XXA6 986 aa16.34■□□□□ 0.21
CNOT1-215ENST00000569020 STK11IPQ8N1F8 1099 aa16.34■□□□□ 0.21
CNOT1-215ENST00000569020 OSBP2Q969R2 916 aa16.34■□□□□ 0.21
CNOT1-215ENST00000569020 ZNF287Q9HBT7 754 aa16.34■□□□□ 0.21
CNOT1-215ENST00000569020 SMCHD1A6NHR9 2005 aa16.34■□□□□ 0.21
CNOT1-215ENST00000569020 ROBO3Q96MS0 1386 aa16.34■□□□□ 0.21
CNOT1-215ENST00000569020 RANBP2P49792 3224 aaKnown RBP16.34■□□□□ 0.21
CNOT1-215ENST00000569020 GPAA1O43292 621 aa16.33■□□□□ 0.2
CNOT1-215ENST00000569020 RASA1P20936 1047 aa16.33■□□□□ 0.2
CNOT1-215ENST00000569020 TDO2P48775 406 aa16.33■□□□□ 0.2
CNOT1-215ENST00000569020 RTP1P59025 263 aa16.33■□□□□ 0.2
CNOT1-215ENST00000569020 PRAMEF19Q5SWL8 479 aa16.33■□□□□ 0.2
CNOT1-215ENST00000569020 NYAP2Q9P242 653 aa16.33■□□□□ 0.2
CNOT1-215ENST00000569020 APPP05067 770 aa16.32■□□□□ 0.2
CNOT1-215ENST00000569020 TSHZ3Q63HK5 1081 aa16.32■□□□□ 0.2
CNOT1-215ENST00000569020 SLC39A5Q6ZMH5 540 aa16.32■□□□□ 0.2
CNOT1-215ENST00000569020 ZNF444Q8N0Y2 327 aaPredicted RBP16.32■□□□□ 0.2
CNOT1-215ENST00000569020 DEFB123Q8N688 67 aa16.32■□□□□ 0.2
CNOT1-215ENST00000569020 SLF1Q9BQI6 1058 aa16.32■□□□□ 0.2
CNOT1-215ENST00000569020 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.32■□□□□ 0.2
CNOT1-215ENST00000569020 NRBP1Q9UHY1 535 aa16.32■□□□□ 0.2
CNOT1-215ENST00000569020 ZNF214Q9UL59 606 aaPredicted RBP16.32■□□□□ 0.2
CNOT1-215ENST00000569020 ATP11BQ9Y2G3 1177 aa16.32■□□□□ 0.2
CNOT1-215ENST00000569020 DIS3Q9Y2L1 958 aaKnown RBP16.32■□□□□ 0.2
CNOT1-215ENST00000569020 TTC41PQ6P2S7 1318 aa16.31■□□□□ 0.2
CNOT1-215ENST00000569020 F5H6K3 240 aa16.31■□□□□ 0.2
CNOT1-215ENST00000569020 ERC2O15083 957 aa16.31■□□□□ 0.2
CNOT1-215ENST00000569020 PGK2P07205 417 aa16.31■□□□□ 0.2
CNOT1-215ENST00000569020 KLRC3Q07444 240 aa16.31■□□□□ 0.2
CNOT1-215ENST00000569020 FAM47AQ5JRC9 791 aa16.31■□□□□ 0.2
CNOT1-215ENST00000569020 TINF2Q9BSI4 451 aa16.31■□□□□ 0.2
CNOT1-215ENST00000569020 CLIP2Q9UDT6 1046 aa16.31■□□□□ 0.2
CNOT1-215ENST00000569020 PATL2C9JE40 543 aaKnown RBP16.3■□□□□ 0.2
CNOT1-215ENST00000569020 M0R2C6 588 aa16.3■□□□□ 0.2
CNOT1-215ENST00000569020 RARBP10826 455 aa16.3■□□□□ 0.2
CNOT1-215ENST00000569020 LRRC41Q15345 812 aa16.3■□□□□ 0.2
CNOT1-215ENST00000569020 ZNF792Q3KQV3 632 aa16.3■□□□□ 0.2
CNOT1-215ENST00000569020 IFNL3Q8IZI9 196 aa16.3■□□□□ 0.2
CNOT1-215ENST00000569020 PRPF38AQ8NAV1 312 aaKnown RBP16.3■□□□□ 0.2
CNOT1-215ENST00000569020 SLC17A8Q8NDX2 589 aa16.3■□□□□ 0.2
CNOT1-215ENST00000569020 REPS2Q8NFH8 660 aa16.3■□□□□ 0.2
CNOT1-215ENST00000569020 NUP88Q99567 741 aaPredicted RBP16.3■□□□□ 0.2
CNOT1-215ENST00000569020 TEX13BQ9BXU2 312 aa16.3■□□□□ 0.2
CNOT1-215ENST00000569020 NACAP1Q9BZK3 213 aa16.3■□□□□ 0.2
CNOT1-215ENST00000569020 EPB41L4AQ9HCS5 686 aaPredicted RBP16.3■□□□□ 0.2
CNOT1-215ENST00000569020 XPNPEP3Q9NQH7 507 aa16.3■□□□□ 0.2
CNOT1-215ENST00000569020 CTDP1Q9Y5B0 961 aaPredicted RBP16.3■□□□□ 0.2
CNOT1-215ENST00000569020 NDUFB10O96000 172 aa16.29■□□□□ 0.2
CNOT1-215ENST00000569020 ADCYAP1R1P41586 468 aa16.29■□□□□ 0.2
CNOT1-215ENST00000569020 SNRNP48Q6IEG0 339 aaKnown RBP16.29■□□□□ 0.2
CNOT1-215ENST00000569020 Q7L0L9 218 aa16.29■□□□□ 0.2
CNOT1-215ENST00000569020 RNF180Q86T96 592 aa16.29■□□□□ 0.2
CNOT1-215ENST00000569020 DDX11Q96FC9 970 aa16.29■□□□□ 0.2
CNOT1-215ENST00000569020 CNPY2Q9Y2B0 182 aa16.29■□□□□ 0.2
CNOT1-215ENST00000569020 IGKV6D-41A0A0C4DH26 115 aa16.28■□□□□ 0.2
CNOT1-215ENST00000569020 ZBED4O75132 1171 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms