RNA–Protein interactions for RNA: ENST00000568770.5

CDH13-211, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-211ENST00000568770 U2AF1Q01081 240 aaKnown RBP eCLIP7.41□□□□□ -1.22
CDH13-211ENST00000568770 ORC1Q13415 861 aa7.41□□□□□ -1.22
CDH13-211ENST00000568770 DSC3Q14574 896 aa7.41□□□□□ -1.22
CDH13-211ENST00000568770 TBC1D10BQ4KMP7 808 aaPredicted RBP7.41□□□□□ -1.22
CDH13-211ENST00000568770 SLC10A5Q5PT55 438 aa7.41□□□□□ -1.22
CDH13-211ENST00000568770 PDE12Q6L8Q7 609 aaKnown RBP7.41□□□□□ -1.22
CDH13-211ENST00000568770 C1orf127Q8N9H9 656 aa7.41□□□□□ -1.22
CDH13-211ENST00000568770 DCPSQ96C86 337 aaKnown RBP7.41□□□□□ -1.22
CDH13-211ENST00000568770 CFAP53Q96M91 514 aa7.41□□□□□ -1.22
CDH13-211ENST00000568770 PNMA5Q96PV4 448 aa7.41□□□□□ -1.22
CDH13-211ENST00000568770 UTP14AQ9BVJ6 771 aaKnown RBP7.41□□□□□ -1.22
CDH13-211ENST00000568770 PCGF6Q9BYE7 350 aa7.41□□□□□ -1.22
CDH13-211ENST00000568770 CHRDQ9H2X0 955 aa7.41□□□□□ -1.22
CDH13-211ENST00000568770 GGA1Q9UJY5 639 aa7.41□□□□□ -1.22
CDH13-211ENST00000568770 CLSPNQ9HAW4 1339 aa7.41□□□□□ -1.22
CDH13-211ENST00000568770 ANKRD33BA6NCL7 494 aa7.4□□□□□ -1.22
CDH13-211ENST00000568770 PSMD14O00487 310 aa7.4□□□□□ -1.22
CDH13-211ENST00000568770 RPLP1P05386 114 aaKnown RBP7.4□□□□□ -1.22
CDH13-211ENST00000568770 SLURP2P0DP57 97 aa7.4□□□□□ -1.22
CDH13-211ENST00000568770 ARAFP10398 606 aa7.4□□□□□ -1.22
CDH13-211ENST00000568770 HCLS1P14317 486 aaPredicted RBP7.4□□□□□ -1.22
CDH13-211ENST00000568770 MAP2K3P46734 347 aa7.4□□□□□ -1.22
CDH13-211ENST00000568770 EIF4A1P60842 406 aaKnown RBP7.4□□□□□ -1.22
CDH13-211ENST00000568770 PARP10Q53GL7 1025 aa7.4□□□□□ -1.22
CDH13-211ENST00000568770 LYPD4Q6UWN0 246 aa7.4□□□□□ -1.22
CDH13-211ENST00000568770 DPF2Q92785 391 aa7.4□□□□□ -1.22
CDH13-211ENST00000568770 MDFIQ99750 246 aa7.4□□□□□ -1.22
CDH13-211ENST00000568770 IGFLR1Q9H665 355 aa7.4□□□□□ -1.22
CDH13-211ENST00000568770 NUDCQ9Y266 331 aa7.4□□□□□ -1.22
CDH13-211ENST00000568770 RBBP6Q7Z6E9 1792 aaKnown RBP7.4□□□□□ -1.23
CDH13-211ENST00000568770 PAPPA2Q9BXP8 1791 aa7.4□□□□□ -1.23
CDH13-211ENST00000568770 COL4A1P02462 1669 aa7.39□□□□□ -1.23
CDH13-211ENST00000568770 TREHO43280 583 aa7.39□□□□□ -1.23
CDH13-211ENST00000568770 SIN3BO75182 1162 aa7.39□□□□□ -1.23
CDH13-211ENST00000568770 MAP3K6O95382 1288 aa7.39□□□□□ -1.23
CDH13-211ENST00000568770 LORP23490 312 aaPredicted RBP7.39□□□□□ -1.23
CDH13-211ENST00000568770 DDX46Q7L014 1031 aaKnown RBP7.39□□□□□ -1.23
CDH13-211ENST00000568770 DHX32Q7L7V1 743 aaKnown RBP7.39□□□□□ -1.23
CDH13-211ENST00000568770 TTC16Q8NEE8 873 aa7.39□□□□□ -1.23
CDH13-211ENST00000568770 PNISRQ8TF01 805 aaKnown RBP7.39□□□□□ -1.23
CDH13-211ENST00000568770 THUMPD2Q9BTF0 503 aaKnown RBP7.39□□□□□ -1.23
CDH13-211ENST00000568770 OXCT2Q9BYC2 517 aaPredicted RBP7.39□□□□□ -1.23
CDH13-211ENST00000568770 DBNDD1Q9H9R9 158 aa7.39□□□□□ -1.23
CDH13-211ENST00000568770 KCNQ5Q9NR82 932 aa7.39□□□□□ -1.23
CDH13-211ENST00000568770 ABI2Q9NYB9 513 aaPredicted RBP7.39□□□□□ -1.23
CDH13-211ENST00000568770 TLR7Q9NYK1 1049 aaKnown RBP7.39□□□□□ -1.23
CDH13-211ENST00000568770 RTL9Q8NET4 1388 aa7.38□□□□□ -1.23
CDH13-211ENST00000568770 ASTN2O75129 1339 aaPredicted RBP7.38□□□□□ -1.23
CDH13-211ENST00000568770 EHHADHQ08426 723 aa7.38□□□□□ -1.23
CDH13-211ENST00000568770 GRAPQ13588 217 aa7.38□□□□□ -1.23
CDH13-211ENST00000568770 PKN2Q16513 984 aaKnown RBP7.38□□□□□ -1.23
CDH13-211ENST00000568770 KIF4BQ2VIQ3 1234 aa7.38□□□□□ -1.23
CDH13-211ENST00000568770 LRP10Q7Z4F1 713 aa7.38□□□□□ -1.23
CDH13-211ENST00000568770 RASAL3Q86YV0 1011 aa7.38□□□□□ -1.23
CDH13-211ENST00000568770 GRAPLQ8TC17 118 aaPredicted RBP7.38□□□□□ -1.23
CDH13-211ENST00000568770 ZNF428Q96B54 188 aa7.38□□□□□ -1.23
CDH13-211ENST00000568770 CDCA5Q96FF9 252 aa7.38□□□□□ -1.23
CDH13-211ENST00000568770 AVENQ9NQS1 362 aaPredicted RBP7.38□□□□□ -1.23
CDH13-211ENST00000568770 HDAC9Q9UKV0 1011 aa7.38□□□□□ -1.23
CDH13-211ENST00000568770 NSFL1CQ9UNZ2 370 aaKnown RBP7.38□□□□□ -1.23
CDH13-211ENST00000568770 SPEF2Q9C093 1822 aa7.38□□□□□ -1.23
CDH13-211ENST00000568770 ZNF646O15015 1829 aaPredicted RBP7.37□□□□□ -1.23
CDH13-211ENST00000568770 J3QW42 95 aa7.37□□□□□ -1.23
CDH13-211ENST00000568770 EREGO14944 169 aa7.37□□□□□ -1.23
CDH13-211ENST00000568770 ECE2O60344 883 aa7.37□□□□□ -1.23
CDH13-211ENST00000568770 TBC1D8O95759 1140 aa7.37□□□□□ -1.23
CDH13-211ENST00000568770 ANXA1P04083 346 aa7.37□□□□□ -1.23
CDH13-211ENST00000568770 POLR3DP05423 398 aaPredicted RBP7.37□□□□□ -1.23
CDH13-211ENST00000568770 RPS12P25398 132 aaKnown RBP7.37□□□□□ -1.23
CDH13-211ENST00000568770 ADH6P28332 368 aa7.37□□□□□ -1.23
CDH13-211ENST00000568770 PLCB3Q01970 1234 aa7.37□□□□□ -1.23
CDH13-211ENST00000568770 TBC1D8BQ0IIM8 1120 aa7.37□□□□□ -1.23
CDH13-211ENST00000568770 PROSER3Q2NL68 480 aa7.37□□□□□ -1.23
CDH13-211ENST00000568770 TTC39BQ5VTQ0 682 aaPredicted RBP7.37□□□□□ -1.23
CDH13-211ENST00000568770 HFE2Q6ZVN8 426 aa7.37□□□□□ -1.23
CDH13-211ENST00000568770 NLRP10Q86W26 655 aa7.37□□□□□ -1.23
CDH13-211ENST00000568770 NPAS4Q8IUM7 802 aa7.37□□□□□ -1.23
CDH13-211ENST00000568770 ZSCAN29Q8IWY8 852 aaPredicted RBP7.37□□□□□ -1.23
CDH13-211ENST00000568770 OR13H1Q8NG92 308 aa7.37□□□□□ -1.23
CDH13-211ENST00000568770 ZNF296Q8WUU4 475 aaPredicted RBP7.37□□□□□ -1.23
CDH13-211ENST00000568770 TNFRSF25Q93038 417 aa7.37□□□□□ -1.23
CDH13-211ENST00000568770 GCC1Q96CN9 775 aa7.37□□□□□ -1.23
CDH13-211ENST00000568770 DMRTB1Q96MA1 342 aa7.37□□□□□ -1.23
CDH13-211ENST00000568770 EFCC1Q9HA90 598 aa7.37□□□□□ -1.23
CDH13-211ENST00000568770 ZFYVE28Q9HCC9 887 aa7.37□□□□□ -1.23
CDH13-211ENST00000568770 DNAJB12Q9NXW2 375 aaKnown RBP7.37□□□□□ -1.23
CDH13-211ENST00000568770 GGA3Q9NZ52 723 aa7.37□□□□□ -1.23
CDH13-211ENST00000568770 KANSL3Q9P2N6 904 aa7.37□□□□□ -1.23
CDH13-211ENST00000568770 POLLQ9UGP5 575 aa7.37□□□□□ -1.23
CDH13-211ENST00000568770 TRMT112Q9UI30 125 aaKnown RBP7.37□□□□□ -1.23
CDH13-211ENST00000568770 LAMB1P07942 1786 aa7.36□□□□□ -1.23
CDH13-211ENST00000568770 CEP290O15078 2479 aa7.36□□□□□ -1.23
CDH13-211ENST00000568770 SH3TC1Q8TE82 1336 aa7.36□□□□□ -1.23
CDH13-211ENST00000568770 WIPF1O43516 503 aa7.36□□□□□ -1.23
CDH13-211ENST00000568770 CELA2BP08218 269 aaPredicted RBP7.36□□□□□ -1.23
CDH13-211ENST00000568770 EIF2S2P20042 333 aaKnown RBP7.36□□□□□ -1.23
CDH13-211ENST00000568770 PPP2R1AP30153 589 aa7.36□□□□□ -1.23
CDH13-211ENST00000568770 GPSM2P81274 684 aa7.36□□□□□ -1.23
CDH13-211ENST00000568770 TAGLNQ01995 201 aaKnown RBP7.36□□□□□ -1.23
CDH13-211ENST00000568770 HABP4Q5JVS0 413 aaKnown RBP7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms