RNA–Protein interactions for RNA: ENST00000568743.1

PKM-221, Transcript of pyruvate kinase M1/2, humanhuman

TSL 1 (best)

Gene PKM, Length 580 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKM-221ENST00000568743 BMP3P12645 472 aa11.86□□□□□ -0.51
PKM-221ENST00000568743 RPS6KB1P23443 525 aa11.86□□□□□ -0.51
PKM-221ENST00000568743 HOXA7P31268 230 aaPredicted RBP11.86□□□□□ -0.51
PKM-221ENST00000568743 SLC1A4P43007 532 aa11.86□□□□□ -0.51
PKM-221ENST00000568743 PABPC4Q13310 644 aaKnown RBP eCLIP11.86□□□□□ -0.518e-8■□□□□ 8.6
PKM-221ENST00000568743 NFXL1Q6ZNB6 911 aa11.86□□□□□ -0.51
PKM-221ENST00000568743 Q6ZUG5 572 aa11.86□□□□□ -0.51
PKM-221ENST00000568743 KCTD1Q719H9 257 aa11.86□□□□□ -0.51
PKM-221ENST00000568743 RAB11FIP4Q86YS3 637 aa11.86□□□□□ -0.51
PKM-221ENST00000568743 SMCR8Q8TEV9 937 aaPredicted RBP11.86□□□□□ -0.51
PKM-221ENST00000568743 TMEM87BQ96K49 555 aa11.86□□□□□ -0.51
PKM-221ENST00000568743 PARK7Q99497 189 aaKnown RBP11.86□□□□□ -0.51
PKM-221ENST00000568743 MYL10Q9BUA6 226 aa11.86□□□□□ -0.51
PKM-221ENST00000568743 C22orf23Q9BZE7 217 aa11.86□□□□□ -0.51
PKM-221ENST00000568743 ZFYVE28Q9HCC9 887 aa11.86□□□□□ -0.51
PKM-221ENST00000568743 ZSWIM6Q9HCJ5 1215 aa11.86□□□□□ -0.51
PKM-221ENST00000568743 ZCCHC17Q9NP64 241 aaKnown RBP11.86□□□□□ -0.51
PKM-221ENST00000568743 CPA4Q9UI42 421 aa11.86□□□□□ -0.51
PKM-221ENST00000568743 PNMA3Q9UL41 463 aa11.86□□□□□ -0.51
PKM-221ENST00000568743 SYNPO2Q9UMS6 1093 aa11.86□□□□□ -0.51
PKM-221ENST00000568743 SLC45A1Q9Y2W3 748 aa11.86□□□□□ -0.51
PKM-221ENST00000568743 MYH4Q9Y623 1939 aa11.86□□□□□ -0.51
PKM-221ENST00000568743 FLOT1O75955 427 aa11.85□□□□□ -0.51
PKM-221ENST00000568743 GOLGA8HP0CJ92 632 aa11.85□□□□□ -0.51
PKM-221ENST00000568743 PDHBP11177 359 aa11.85□□□□□ -0.51
PKM-221ENST00000568743 ANAPC15P60006 121 aa11.85□□□□□ -0.51
PKM-221ENST00000568743 HERVK_113P62684 666 aa11.85□□□□□ -0.51
PKM-221ENST00000568743 FGD1P98174 961 aa11.85□□□□□ -0.51
PKM-221ENST00000568743 TTBK2Q6IQ55 1244 aa11.85□□□□□ -0.51
PKM-221ENST00000568743 POTEEQ6S8J3 1075 aa11.85□□□□□ -0.51
PKM-221ENST00000568743 RUFY3Q7L099 469 aa11.85□□□□□ -0.51
PKM-221ENST00000568743 DCAF4Q8WV16 495 aa11.85□□□□□ -0.51
PKM-221ENST00000568743 GMCL1Q96IK5 515 aa11.85□□□□□ -0.51
PKM-221ENST00000568743 UPF2Q9HAU5 1272 aaKnown RBP11.85□□□□□ -0.51
PKM-221ENST00000568743 GPCPD1Q9NPB8 672 aa11.85□□□□□ -0.51
PKM-221ENST00000568743 SAGE1Q9NXZ1 904 aa11.85□□□□□ -0.51
PKM-221ENST00000568743 CYP46A1Q9Y6A2 500 aa11.85□□□□□ -0.51
PKM-221ENST00000568743 WDR19Q8NEZ3 1342 aa11.85□□□□□ -0.51
PKM-221ENST00000568743 ADGRA2Q96PE1 1338 aa11.85□□□□□ -0.51
PKM-221ENST00000568743 CCDC69A6NI79 296 aa11.84□□□□□ -0.51
PKM-221ENST00000568743 SPDYE16A6NNV3 312 aaPredicted RBP11.84□□□□□ -0.51
PKM-221ENST00000568743 TMEM232C9JQI7 657 aa11.84□□□□□ -0.51
PKM-221ENST00000568743 ECM2O94769 699 aaPredicted RBP11.84□□□□□ -0.51
PKM-221ENST00000568743 SLC16A2P36021 539 aa11.84□□□□□ -0.51
PKM-221ENST00000568743 ZNF543Q08ER8 600 aa11.84□□□□□ -0.51
PKM-221ENST00000568743 IKQ13123 557 aaPredicted RBP11.84□□□□□ -0.51
PKM-221ENST00000568743 CATIPQ7Z7H3 387 aa11.84□□□□□ -0.51
PKM-221ENST00000568743 ZNF654Q8IZM8 581 aa11.84□□□□□ -0.51
PKM-221ENST00000568743 ANKRD13CQ8N6S4 541 aa11.84□□□□□ -0.51
PKM-221ENST00000568743 NUP133Q8WUM0 1156 aa11.84□□□□□ -0.51
PKM-221ENST00000568743 BRF1Q92994 677 aa11.84□□□□□ -0.51
PKM-221ENST00000568743 ATG4CQ96DT6 458 aa11.84□□□□□ -0.51
PKM-221ENST00000568743 LARP6Q9BRS8 491 aaKnown RBP11.84□□□□□ -0.51
PKM-221ENST00000568743 MTA3Q9BTC8 594 aa11.84□□□□□ -0.51
PKM-221ENST00000568743 PAGR1Q9BTK6 254 aa11.84□□□□□ -0.51
PKM-221ENST00000568743 TM6SF1Q9BZW5 370 aa11.84□□□□□ -0.51
PKM-221ENST00000568743 CPVLQ9H3G5 476 aa11.84□□□□□ -0.51
PKM-221ENST00000568743 NAP1L2Q9ULW6 460 aaPredicted RBP11.84□□□□□ -0.51
PKM-221ENST00000568743 TLR2O60603 784 aa11.83□□□□□ -0.52
PKM-221ENST00000568743 SNHG28P0DPA3 235 aa11.83□□□□□ -0.52
PKM-221ENST00000568743 HSPA8P11142 646 aaKnown RBP11.83□□□□□ -0.52
PKM-221ENST00000568743 RXRAP19793 462 aa11.83□□□□□ -0.52
PKM-221ENST00000568743 DSG3P32926 999 aa11.83□□□□□ -0.52
PKM-221ENST00000568743 LIFRP42702 1097 aa11.83□□□□□ -0.52
PKM-221ENST00000568743 SNAP25P60880 206 aa11.83□□□□□ -0.52
PKM-221ENST00000568743 APOBRQ0VD83 1088 aa11.83□□□□□ -0.52
PKM-221ENST00000568743 COG2Q14746 738 aa11.83□□□□□ -0.52
PKM-221ENST00000568743 CCDC144CPQ8IYA2 1237 aa11.83□□□□□ -0.52
PKM-221ENST00000568743 KIFC2Q96AC6 838 aa11.83□□□□□ -0.52
PKM-221ENST00000568743 SLF1Q9BQI6 1058 aa11.83□□□□□ -0.52
PKM-221ENST00000568743 TXNRD2Q9NNW7 524 aa11.83□□□□□ -0.52
PKM-221ENST00000568743 PDRG1Q9NUG6 133 aa11.83□□□□□ -0.52
PKM-221ENST00000568743 BRPF3Q9ULD4 1205 aa11.83□□□□□ -0.52
PKM-221ENST00000568743 PPP1R9AQ9ULJ8 1098 aa11.83□□□□□ -0.52
PKM-221ENST00000568743 KLF18A0A0U1RQI7 1052 aa11.82□□□□□ -0.52
PKM-221ENST00000568743 GPR25O00155 361 aa11.82□□□□□ -0.52
PKM-221ENST00000568743 CNMDO75829 334 aa11.82□□□□□ -0.52
PKM-221ENST00000568743 PARP1P09874 1014 aaKnown RBP11.82□□□□□ -0.52
PKM-221ENST00000568743 BCRP11274 1271 aa11.82□□□□□ -0.52
PKM-221ENST00000568743 RBM25P49756 843 aaKnown RBP11.82□□□□□ -0.52
PKM-221ENST00000568743 STAT2P52630 851 aa11.82□□□□□ -0.52
PKM-221ENST00000568743 TROAPQ12815 778 aa11.82□□□□□ -0.52
PKM-221ENST00000568743 TOB2Q14106 344 aaPredicted RBP11.82□□□□□ -0.52
PKM-221ENST00000568743 C17orf99Q6UX52 265 aa11.82□□□□□ -0.52
PKM-221ENST00000568743 SGMS1Q86VZ5 419 aa11.82□□□□□ -0.52
PKM-221ENST00000568743 MICU3Q86XE3 530 aa11.82□□□□□ -0.52
PKM-221ENST00000568743 STAG2Q8N3U4 1231 aa11.82□□□□□ -0.52
PKM-221ENST00000568743 IL17RAQ96F46 866 aa11.82□□□□□ -0.52
PKM-221ENST00000568743 TBC1D32Q96NH3 1257 aa11.82□□□□□ -0.52
PKM-221ENST00000568743 KIF2CQ99661 725 aa11.82□□□□□ -0.52
PKM-221ENST00000568743 CFHR5Q9BXR6 569 aa11.82□□□□□ -0.52
PKM-221ENST00000568743 UBA5Q9GZZ9 404 aa11.82□□□□□ -0.52
PKM-221ENST00000568743 HOXC10Q9NYD6 342 aa11.82□□□□□ -0.52
PKM-221ENST00000568743 BTBD7Q9P203 1132 aa11.82□□□□□ -0.52
PKM-221ENST00000568743 FEM1BQ9UK73 627 aa11.82□□□□□ -0.52
PKM-221ENST00000568743 SLC12A7Q9Y666 1083 aa11.82□□□□□ -0.52
PKM-221ENST00000568743 VWA5AO00534 786 aa11.81□□□□□ -0.52
PKM-221ENST00000568743 DDAH1O94760 285 aa11.81□□□□□ -0.52
PKM-221ENST00000568743 GCLCP48506 637 aaPredicted RBP11.81□□□□□ -0.52
PKM-221ENST00000568743 CTCFP49711 727 aaPredicted RBP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms