RNA–Protein interactions for RNA: ENST00000568691.5

VPS9D1-207, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 838 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-207ENST00000568691 GPR37L1O60883 481 aa14.51□□□□□ -0.09
VPS9D1-207ENST00000568691 ZNF865P0CJ78 1059 aaPredicted RBP14.51□□□□□ -0.09
VPS9D1-207ENST00000568691 ARID4AP29374 1257 aaPredicted RBP14.51□□□□□ -0.09
VPS9D1-207ENST00000568691 CDK7P50613 346 aa14.51□□□□□ -0.09
VPS9D1-207ENST00000568691 CRACR2BQ8N4Y2 399 aaPredicted RBP14.51□□□□□ -0.09
VPS9D1-207ENST00000568691 SHCBP1Q8NEM2 672 aa14.51□□□□□ -0.09
VPS9D1-207ENST00000568691 VWCEQ96DN2 955 aa14.51□□□□□ -0.09
VPS9D1-207ENST00000568691 CD320Q9NPF0 282 aa14.51□□□□□ -0.09
VPS9D1-207ENST00000568691 ZBTB40Q9NUA8 1239 aa14.51□□□□□ -0.09
VPS9D1-207ENST00000568691 PRRC2BQ5JSZ5 2229 aaKnown RBP14.5□□□□□ -0.09
VPS9D1-207ENST00000568691 ROBO3Q96MS0 1386 aa14.5□□□□□ -0.09
VPS9D1-207ENST00000568691 A0A1W2PRG0 241 aa14.5□□□□□ -0.09
VPS9D1-207ENST00000568691 MYADML2A6NDP7 307 aa14.5□□□□□ -0.09
VPS9D1-207ENST00000568691 ERC2O15083 957 aa14.5□□□□□ -0.09
VPS9D1-207ENST00000568691 MYOGP15173 224 aa14.5□□□□□ -0.09
VPS9D1-207ENST00000568691 ACLYP53396 1101 aa14.5□□□□□ -0.09
VPS9D1-207ENST00000568691 KLHDC9Q8NEP7 349 aa14.5□□□□□ -0.09
VPS9D1-207ENST00000568691 IL27Q8NEV9 243 aa14.5□□□□□ -0.09
VPS9D1-207ENST00000568691 FEZ1Q99689 392 aa14.5□□□□□ -0.09
VPS9D1-207ENST00000568691 FOCADQ5VW36 1801 aa14.5□□□□□ -0.09
VPS9D1-207ENST00000568691 RARBP10826 455 aa14.49□□□□□ -0.09
VPS9D1-207ENST00000568691 DYNLL1P63167 89 aaKnown RBP14.49□□□□□ -0.09
VPS9D1-207ENST00000568691 PPIGQ13427 754 aaKnown RBP eCLIP14.49□□□□□ -0.091e-6■■□□□ 12.4
VPS9D1-207ENST00000568691 RNF180Q86T96 592 aa14.49□□□□□ -0.09
VPS9D1-207ENST00000568691 HERVK_113Q902F9 699 aa14.49□□□□□ -0.09
VPS9D1-207ENST00000568691 GBF1Q92538 1859 aa14.48□□□□□ -0.09
VPS9D1-207ENST00000568691 DCDC2CA8MYV0 355 aa14.48□□□□□ -0.09
VPS9D1-207ENST00000568691 RFXAPO00287 272 aa14.48□□□□□ -0.09
VPS9D1-207ENST00000568691 RABGGTBP53611 331 aa14.48□□□□□ -0.09
VPS9D1-207ENST00000568691 USP14P54578 494 aa14.48□□□□□ -0.09
VPS9D1-207ENST00000568691 EVX2Q03828 476 aa14.48□□□□□ -0.09
VPS9D1-207ENST00000568691 HDAC1Q13547 482 aaPredicted RBP14.48□□□□□ -0.09
VPS9D1-207ENST00000568691 RAB3GAP1Q15042 981 aa14.48□□□□□ -0.09
VPS9D1-207ENST00000568691 KRT40Q6A162 431 aa14.48□□□□□ -0.09
VPS9D1-207ENST00000568691 ABRAQ8N0Z2 381 aa14.48□□□□□ -0.09
VPS9D1-207ENST00000568691 MICALL1Q8N3F8 863 aa14.48□□□□□ -0.09
VPS9D1-207ENST00000568691 SYNRGQ9UMZ2 1314 aa14.47□□□□□ -0.09
VPS9D1-207ENST00000568691 EPOPA6NHQ4 379 aa14.47□□□□□ -0.09
VPS9D1-207ENST00000568691 ADCY6O43306 1168 aa14.47□□□□□ -0.09
VPS9D1-207ENST00000568691 PGK2P07205 417 aa14.47□□□□□ -0.09
VPS9D1-207ENST00000568691 SHMT1P34896 483 aa14.47□□□□□ -0.09
VPS9D1-207ENST00000568691 COG2Q14746 738 aa14.47□□□□□ -0.09
VPS9D1-207ENST00000568691 RAB30Q15771 203 aa14.47□□□□□ -0.09
VPS9D1-207ENST00000568691 TSEN34Q9BSV6 310 aaKnown RBP14.47□□□□□ -0.09
VPS9D1-207ENST00000568691 RWDD1Q9H446 243 aaPredicted RBP14.47□□□□□ -0.09
VPS9D1-207ENST00000568691 STARD7Q9NQZ5 370 aa14.47□□□□□ -0.09
VPS9D1-207ENST00000568691 NRBP1Q9UHY1 535 aa14.47□□□□□ -0.09
VPS9D1-207ENST00000568691 MSRAQ9UJ68 235 aa14.47□□□□□ -0.09
VPS9D1-207ENST00000568691 MTCH2Q9Y6C9 303 aa14.47□□□□□ -0.09
VPS9D1-207ENST00000568691 WDFY4Q6ZS81 3184 aa14.46□□□□□ -0.09
VPS9D1-207ENST00000568691 UMODL1Q5DID0 1318 aa14.46□□□□□ -0.09
VPS9D1-207ENST00000568691 UBTFL1P0CB47 393 aaPredicted RBP14.46□□□□□ -0.09
VPS9D1-207ENST00000568691 CYP2C18P33260 490 aa14.46□□□□□ -0.09
VPS9D1-207ENST00000568691 MRE11P49959 708 aa14.46□□□□□ -0.09
VPS9D1-207ENST00000568691 KCNA10Q16322 511 aa14.46□□□□□ -0.09
VPS9D1-207ENST00000568691 ZNF792Q3KQV3 632 aa14.46□□□□□ -0.09
VPS9D1-207ENST00000568691 NAA16Q6N069 864 aaPredicted RBP14.46□□□□□ -0.09
VPS9D1-207ENST00000568691 ATG4CQ96DT6 458 aa14.46□□□□□ -0.09
VPS9D1-207ENST00000568691 NEUROD6Q96NK8 337 aa14.46□□□□□ -0.09
VPS9D1-207ENST00000568691 TINF2Q9BSI4 451 aa14.46□□□□□ -0.09
VPS9D1-207ENST00000568691 PPP1R12CQ9BZL4 782 aa14.46□□□□□ -0.09
VPS9D1-207ENST00000568691 SLC28A3Q9HAS3 691 aa14.46□□□□□ -0.09
VPS9D1-207ENST00000568691 SNRKQ9NRH2 765 aa14.46□□□□□ -0.09
VPS9D1-207ENST00000568691 LRP2BPQ9P2M1 347 aa14.46□□□□□ -0.09
VPS9D1-207ENST00000568691 LRRC37A2A6NM11 1700 aa14.46□□□□□ -0.1
VPS9D1-207ENST00000568691 PI4K2BG5E9Z4 385 aa14.45□□□□□ -0.1
VPS9D1-207ENST00000568691 ARHGEF15O94989 841 aa14.45□□□□□ -0.1
VPS9D1-207ENST00000568691 POU3F3P20264 500 aaPredicted RBP14.45□□□□□ -0.1
VPS9D1-207ENST00000568691 DSG3P32926 999 aa14.45□□□□□ -0.1
VPS9D1-207ENST00000568691 SEPT2Q15019 361 aa14.45□□□□□ -0.1
VPS9D1-207ENST00000568691 PSRC1Q6PGN9 363 aaPredicted RBP14.45□□□□□ -0.1
VPS9D1-207ENST00000568691 NCAPG2Q86XI2 1143 aa14.45□□□□□ -0.1
VPS9D1-207ENST00000568691 FAM126BQ8IXS8 530 aa14.45□□□□□ -0.1
VPS9D1-207ENST00000568691 TRIM34Q9BYJ4 488 aa14.45□□□□□ -0.1
VPS9D1-207ENST00000568691 MROH8Q9H579 483 aa14.45□□□□□ -0.1
VPS9D1-207ENST00000568691 IL23AQ9NPF7 189 aa14.45□□□□□ -0.1
VPS9D1-207ENST00000568691 PCDHB15Q9Y5E8 787 aa14.45□□□□□ -0.1
VPS9D1-207ENST00000568691 BAG3O95817 575 aa14.44□□□□□ -0.1
VPS9D1-207ENST00000568691 CD4P01730 458 aa14.44□□□□□ -0.1
VPS9D1-207ENST00000568691 CYP2E1P05181 493 aaPredicted RBP14.44□□□□□ -0.1
VPS9D1-207ENST00000568691 HLA-DOAP06340 250 aa14.44□□□□□ -0.1
VPS9D1-207ENST00000568691 PLCG2P16885 1265 aa14.44□□□□□ -0.1
VPS9D1-207ENST00000568691 PLCD1P51178 756 aa14.44□□□□□ -0.1
VPS9D1-207ENST00000568691 TMEM132BQ14DG7 1078 aa14.44□□□□□ -0.1
VPS9D1-207ENST00000568691 ABCB5Q2M3G0 1257 aa14.44□□□□□ -0.1
VPS9D1-207ENST00000568691 CERKLQ49MI3 558 aaPredicted RBP14.44□□□□□ -0.1
VPS9D1-207ENST00000568691 SIAH1Q8IUQ4 282 aa14.44□□□□□ -0.1
VPS9D1-207ENST00000568691 MEIS3Q99687 375 aa14.44□□□□□ -0.1
VPS9D1-207ENST00000568691 EHD4Q9H223 541 aa14.44□□□□□ -0.1
VPS9D1-207ENST00000568691 PIH1D3Q9NQM4 214 aaKnown RBP14.44□□□□□ -0.1
VPS9D1-207ENST00000568691 HOXC10Q9NYD6 342 aa14.44□□□□□ -0.1
VPS9D1-207ENST00000568691 AKAP2Q9Y2D5 859 aa14.44□□□□□ -0.1
VPS9D1-207ENST00000568691 MOXD2PA6NHM9 499 aa14.43□□□□□ -0.1
VPS9D1-207ENST00000568691 CTAGE5O15320 804 aa14.43□□□□□ -0.1
VPS9D1-207ENST00000568691 SNAI1O95863 264 aaPredicted RBP14.43□□□□□ -0.1
VPS9D1-207ENST00000568691 AKR1A1P14550 325 aa14.43□□□□□ -0.1
VPS9D1-207ENST00000568691 AAK1Q2M2I8 961 aa14.43□□□□□ -0.1
VPS9D1-207ENST00000568691 OTOP2Q7RTS6 562 aa14.43□□□□□ -0.1
VPS9D1-207ENST00000568691 TMEM199Q8N511 208 aa14.43□□□□□ -0.1
VPS9D1-207ENST00000568691 TSPYL2Q9H2G4 693 aaPredicted RBP14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms