RNA–Protein interactions for RNA: ENST00000568673.5

TCF4-240, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 2,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-240ENST00000568673 ZNF287Q9HBT7 754 aa10.97□□□□□ -0.65
TCF4-240ENST00000568673 SAMSN1Q9NSI8 373 aaKnown RBP10.97□□□□□ -0.65
TCF4-240ENST00000568673 PCDHA4Q9UN74 947 aa10.97□□□□□ -0.65
TCF4-240ENST00000568673 ADAMTS3O15072 1205 aa10.97□□□□□ -0.65
TCF4-240ENST00000568673 GYS1P13807 737 aa10.97□□□□□ -0.65
TCF4-240ENST00000568673 E2F4Q16254 413 aa10.97□□□□□ -0.65
TCF4-240ENST00000568673 IL17AQ16552 155 aa10.97□□□□□ -0.65
TCF4-240ENST00000568673 SPECC1LQ69YQ0 1117 aa10.97□□□□□ -0.65
TCF4-240ENST00000568673 GPR75-ASB3A0A0A6YYF3 556 aa10.96□□□□□ -0.65
TCF4-240ENST00000568673 BBOX1O75936 387 aa10.96□□□□□ -0.65
TCF4-240ENST00000568673 UFL1O94874 794 aa10.96□□□□□ -0.65
TCF4-240ENST00000568673 SERPINB2P05120 415 aa10.96□□□□□ -0.65
TCF4-240ENST00000568673 ST5P78524 1137 aa10.96□□□□□ -0.65
TCF4-240ENST00000568673 NCBP1Q09161 790 aaKnown RBP10.96□□□□□ -0.65
TCF4-240ENST00000568673 NR1I3Q14994 352 aa10.96□□□□□ -0.65
TCF4-240ENST00000568673 SPATA1Q5VX52 437 aa10.96□□□□□ -0.65
TCF4-240ENST00000568673 GALNT17Q6IS24 598 aa10.96□□□□□ -0.65
TCF4-240ENST00000568673 MAPKAPK5Q8IW41 473 aa10.96□□□□□ -0.65
TCF4-240ENST00000568673 C4orf32Q8N8J7 132 aa10.96□□□□□ -0.65
TCF4-240ENST00000568673 RBM17Q96I25 401 aaKnown RBP10.96□□□□□ -0.65
TCF4-240ENST00000568673 GGA1Q9UJY5 639 aa10.96□□□□□ -0.65
TCF4-240ENST00000568673 STX8Q9UNK0 236 aa10.96□□□□□ -0.65
TCF4-240ENST00000568673 PALM3A6NDB9 673 aaPredicted RBP10.96□□□□□ -0.66
TCF4-240ENST00000568673 M0R2N6 131 aa10.96□□□□□ -0.66
TCF4-240ENST00000568673 RASA1P20936 1047 aa10.96□□□□□ -0.66
TCF4-240ENST00000568673 CASP1P29466 404 aa10.96□□□□□ -0.66
TCF4-240ENST00000568673 BTDP43251 543 aa10.96□□□□□ -0.66
TCF4-240ENST00000568673 CUL4BQ13620 913 aa10.96□□□□□ -0.66
TCF4-240ENST00000568673 FCHSD1Q86WN1 690 aa10.96□□□□□ -0.66
TCF4-240ENST00000568673 FAM177A1Q8N128 213 aaPredicted RBP10.96□□□□□ -0.66
TCF4-240ENST00000568673 PDCL2Q8N4E4 241 aa10.96□□□□□ -0.66
TCF4-240ENST00000568673 SLC44A5Q8NCS7 719 aa10.96□□□□□ -0.66
TCF4-240ENST00000568673 GPKOWQ92917 476 aaPredicted RBP eCLIP10.96□□□□□ -0.66
TCF4-240ENST00000568673 FAM163AQ96GL9 167 aaPredicted RBP10.96□□□□□ -0.66
TCF4-240ENST00000568673 TMEM47Q9BQJ4 181 aa10.96□□□□□ -0.66
TCF4-240ENST00000568673 LZTS2Q9BRK4 669 aa10.96□□□□□ -0.66
TCF4-240ENST00000568673 CCDC94Q9BW85 323 aaPredicted RBP10.96□□□□□ -0.66
TCF4-240ENST00000568673 EP400Q96L91 3159 aa10.95□□□□□ -0.66
TCF4-240ENST00000568673 A0A1B0GTH6 734 aa10.95□□□□□ -0.66
TCF4-240ENST00000568673 PPP1R3GB7ZBB8 358 aa10.95□□□□□ -0.66
TCF4-240ENST00000568673 ARHGAP6O43182 974 aa10.95□□□□□ -0.66
TCF4-240ENST00000568673 CYTH3O43739 400 aa10.95□□□□□ -0.66
TCF4-240ENST00000568673 CD44P16070 742 aaKnown RBP10.95□□□□□ -0.66
TCF4-240ENST00000568673 PLCG2P16885 1265 aa10.95□□□□□ -0.66
TCF4-240ENST00000568673 LONP1P36776 959 aaKnown RBP10.95□□□□□ -0.66
TCF4-240ENST00000568673 PTPN21Q16825 1174 aa10.95□□□□□ -0.66
TCF4-240ENST00000568673 TYW1BQ6NUM6 668 aa10.95□□□□□ -0.66
TCF4-240ENST00000568673 PAXIP1Q6ZW49 1069 aaPredicted RBP10.95□□□□□ -0.66
TCF4-240ENST00000568673 CCDC148Q8NFR7 591 aa10.95□□□□□ -0.66
TCF4-240ENST00000568673 BARHL2Q9NY43 387 aa10.95□□□□□ -0.66
TCF4-240ENST00000568673 SAP30BPQ9UHR5 308 aaKnown RBP10.95□□□□□ -0.66
TCF4-240ENST00000568673 FAM205AQ6ZU69 1335 aa10.95□□□□□ -0.66
TCF4-240ENST00000568673 HOXA10P31260 410 aaPredicted RBP10.95□□□□□ -0.66
TCF4-240ENST00000568673 SLC35G1Q2M3R5 365 aa10.95□□□□□ -0.66
TCF4-240ENST00000568673 KLHL10Q6JEL2 608 aa10.95□□□□□ -0.66
TCF4-240ENST00000568673 PDXDC2PQ6P474 469 aa10.95□□□□□ -0.66
TCF4-240ENST00000568673 C16orf86Q6ZW13 317 aa10.95□□□□□ -0.66
TCF4-240ENST00000568673 TMEM139Q8IV31 216 aa10.95□□□□□ -0.66
TCF4-240ENST00000568673 SEPT12Q8IYM1 358 aa10.95□□□□□ -0.66
TCF4-240ENST00000568673 DAGLBQ8NCG7 672 aa10.95□□□□□ -0.66
TCF4-240ENST00000568673 CCDC194A0A1B0GVG4 234 aa10.94□□□□□ -0.66
TCF4-240ENST00000568673 STX10O60499 249 aa10.94□□□□□ -0.66
TCF4-240ENST00000568673 CDK8P49336 464 aa10.94□□□□□ -0.66
TCF4-240ENST00000568673 GOLGA8FQ08AF8 430 aa10.94□□□□□ -0.66
TCF4-240ENST00000568673 GOLGA8DPQ0D2H9 430 aa10.94□□□□□ -0.66
TCF4-240ENST00000568673 WWC2Q6AWC2 1192 aa10.94□□□□□ -0.66
TCF4-240ENST00000568673 APTXQ7Z2E3 356 aaKnown RBP10.94□□□□□ -0.66
TCF4-240ENST00000568673 SLF2Q8IX21 1173 aa10.94□□□□□ -0.66
TCF4-240ENST00000568673 TEX11Q8IYF3 940 aa10.94□□□□□ -0.66
TCF4-240ENST00000568673 TC2NQ8N9U0 490 aa10.94□□□□□ -0.66
TCF4-240ENST00000568673 TBC1D22AQ8WUA7 517 aa10.94□□□□□ -0.66
TCF4-240ENST00000568673 EYA3Q99504 573 aa10.94□□□□□ -0.66
TCF4-240ENST00000568673 BAG1Q99933 345 aaPredicted RBP10.94□□□□□ -0.66
TCF4-240ENST00000568673 L2HGDHQ9H9P8 463 aa10.94□□□□□ -0.66
TCF4-240ENST00000568673 PCDHA6Q9UN73 950 aa10.94□□□□□ -0.66
TCF4-240ENST00000568673 PCDHA8Q9Y5H6 950 aa10.94□□□□□ -0.66
TCF4-240ENST00000568673 SYNRGQ9UMZ2 1314 aa10.94□□□□□ -0.66
TCF4-240ENST00000568673 ZSCAN12O43309 604 aa10.94□□□□□ -0.66
TCF4-240ENST00000568673 GTPBP6O43824 516 aaPredicted RBP10.94□□□□□ -0.66
TCF4-240ENST00000568673 TXLNAP40222 546 aa10.94□□□□□ -0.66
TCF4-240ENST00000568673 RHBDL3P58872 404 aa10.94□□□□□ -0.66
TCF4-240ENST00000568673 ETF1P62495 437 aaKnown RBP10.94□□□□□ -0.66
TCF4-240ENST00000568673 MFSD14BQ5SR56 506 aa10.94□□□□□ -0.66
TCF4-240ENST00000568673 MEX3CQ5U5Q3 659 aaKnown RBP10.94□□□□□ -0.66
TCF4-240ENST00000568673 CDKAL1Q5VV42 579 aa10.94□□□□□ -0.66
TCF4-240ENST00000568673 SYT10Q6XYQ8 523 aa10.94□□□□□ -0.66
TCF4-240ENST00000568673 HOMER1Q86YM7 354 aa10.94□□□□□ -0.66
TCF4-240ENST00000568673 NEDD1Q8NHV4 660 aa10.94□□□□□ -0.66
TCF4-240ENST00000568673 TBC1D16Q8TBP0 767 aa10.94□□□□□ -0.66
TCF4-240ENST00000568673 RASGRP4Q8TDF6 673 aa10.94□□□□□ -0.66
TCF4-240ENST00000568673 STAMQ92783 540 aa10.94□□□□□ -0.66
TCF4-240ENST00000568673 CTAGE1Q96RT6 745 aa10.94□□□□□ -0.66
TCF4-240ENST00000568673 MTRQ99707 1265 aa10.94□□□□□ -0.66
TCF4-240ENST00000568673 POLLQ9UGP5 575 aa10.94□□□□□ -0.66
TCF4-240ENST00000568673 ZNF215Q9UL58 517 aaPredicted RBP10.94□□□□□ -0.66
TCF4-240ENST00000568673 NAV1Q8NEY1 1877 aa10.93□□□□□ -0.66
TCF4-240ENST00000568673 FLT1P17948 1338 aa10.93□□□□□ -0.66
TCF4-240ENST00000568673 KLRF2D3W0D1 207 aa10.93□□□□□ -0.66
TCF4-240ENST00000568673 STXBP3O00186 592 aa10.93□□□□□ -0.66
TCF4-240ENST00000568673 STX17P56962 302 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 155.5 ms