RNA–Protein interactions for RNA: ENST00000566703.1

RNF40-209, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-209ENST00000566703 NRBP1Q9UHY1 535 aa17.96■□□□□ 0.47
RNF40-209ENST00000566703 DIS3Q9Y2L1 958 aaKnown RBP17.96■□□□□ 0.47
RNF40-209ENST00000566703 SOX1O00570 391 aaPredicted RBP17.95■□□□□ 0.46
RNF40-209ENST00000566703 TDHQ8IZJ6 230 aa17.95■□□□□ 0.46
RNF40-209ENST00000566703 OSBP2Q969R2 916 aa17.95■□□□□ 0.46
RNF40-209ENST00000566703 UBE2OQ9C0C9 1292 aaKnown RBP17.95■□□□□ 0.46
RNF40-209ENST00000566703 ZNF287Q9HBT7 754 aa17.95■□□□□ 0.46
RNF40-209ENST00000566703 PPP1R9AQ9ULJ8 1098 aa17.95■□□□□ 0.46
RNF40-209ENST00000566703 RLFQ13129 1914 aa17.94■□□□□ 0.46
RNF40-209ENST00000566703 VWA5AO00534 786 aa17.94■□□□□ 0.46
RNF40-209ENST00000566703 STAT3P40763 770 aa17.94■□□□□ 0.46
RNF40-209ENST00000566703 LRCH3Q96II8 777 aa17.94■□□□□ 0.46
RNF40-209ENST00000566703 MAML3Q96JK9 1138 aa17.94■□□□□ 0.46
RNF40-209ENST00000566703 FBXO28Q9NVF7 368 aa17.94■□□□□ 0.46
RNF40-209ENST00000566703 ZNF236Q9UL36 1845 aa17.93■□□□□ 0.46
RNF40-209ENST00000566703 MINDY4BA8MYZ0 360 aa17.93■□□□□ 0.46
RNF40-209ENST00000566703 RASA1P20936 1047 aa17.93■□□□□ 0.46
RNF40-209ENST00000566703 MMP19Q99542 508 aa17.93■□□□□ 0.46
RNF40-209ENST00000566703 SYNPO2Q9UMS6 1093 aa17.93■□□□□ 0.46
RNF40-209ENST00000566703 TTC41PQ6P2S7 1318 aa17.93■□□□□ 0.46
RNF40-209ENST00000566703 ROBO3Q96MS0 1386 aa17.92■□□□□ 0.46
RNF40-209ENST00000566703 PATL2C9JE40 543 aaKnown RBP17.92■□□□□ 0.46
RNF40-209ENST00000566703 F5H6K3 240 aa17.92■□□□□ 0.46
RNF40-209ENST00000566703 ERC2O15083 957 aa17.92■□□□□ 0.46
RNF40-209ENST00000566703 GPAA1O43292 621 aa17.92■□□□□ 0.46
RNF40-209ENST00000566703 KLRC3Q07444 240 aa17.92■□□□□ 0.46
RNF40-209ENST00000566703 KCTD2Q14681 263 aa17.92■□□□□ 0.46
RNF40-209ENST00000566703 FAM83BQ5T0W9 1011 aa17.92■□□□□ 0.46
RNF40-209ENST00000566703 SAMD1Q6SPF0 538 aaPredicted RBP17.92■□□□□ 0.46
RNF40-209ENST00000566703 ZNF444Q8N0Y2 327 aaPredicted RBP17.92■□□□□ 0.46
RNF40-209ENST00000566703 REPS2Q8NFH8 660 aa17.92■□□□□ 0.46
RNF40-209ENST00000566703 ZNF214Q9UL59 606 aaPredicted RBP17.92■□□□□ 0.46
RNF40-209ENST00000566703 A0A0G2JMZ2 1700 aa17.92■□□□□ 0.46
RNF40-209ENST00000566703 BAZ2AQ9UIF9 1905 aaKnown RBP17.92■□□□□ 0.46
RNF40-209ENST00000566703 KBTBD13C9JR72 458 aa17.91■□□□□ 0.46
RNF40-209ENST00000566703 ZNF792Q3KQV3 632 aa17.91■□□□□ 0.46
RNF40-209ENST00000566703 GJC2Q5T442 439 aaPredicted RBP17.91■□□□□ 0.46
RNF40-209ENST00000566703 PRPF38AQ8NAV1 312 aaKnown RBP17.91■□□□□ 0.46
RNF40-209ENST00000566703 MKL1Q969V6 931 aa17.91■□□□□ 0.46
RNF40-209ENST00000566703 LBHD1Q9BQE6 289 aaPredicted RBP17.91■□□□□ 0.46
RNF40-209ENST00000566703 SLF1Q9BQI6 1058 aa17.91■□□□□ 0.46
RNF40-209ENST00000566703 IGKV6D-41A0A0C4DH26 115 aa17.9■□□□□ 0.46
RNF40-209ENST00000566703 ATP2A1O14983 1001 aa17.9■□□□□ 0.46
RNF40-209ENST00000566703 RAD21O60216 631 aa17.9■□□□□ 0.46
RNF40-209ENST00000566703 PRAMEF19Q5SWL8 479 aa17.9■□□□□ 0.46
RNF40-209ENST00000566703 SLC39A5Q6ZMH5 540 aa17.9■□□□□ 0.46
RNF40-209ENST00000566703 MSL3Q8N5Y2 521 aaKnown RBP17.9■□□□□ 0.46
RNF40-209ENST00000566703 TINF2Q9BSI4 451 aa17.9■□□□□ 0.46
RNF40-209ENST00000566703 TEX13BQ9BXU2 312 aa17.9■□□□□ 0.46
RNF40-209ENST00000566703 NACAP1Q9BZK3 213 aa17.9■□□□□ 0.46
RNF40-209ENST00000566703 PRKAG2Q9UGJ0 569 aa17.9■□□□□ 0.46
RNF40-209ENST00000566703 NDUFB10O96000 172 aa17.89■□□□□ 0.45
RNF40-209ENST00000566703 APPP05067 770 aa17.89■□□□□ 0.45
RNF40-209ENST00000566703 TDO2P48775 406 aa17.89■□□□□ 0.45
RNF40-209ENST00000566703 ATN1P54259 1190 aaPredicted RBP17.89■□□□□ 0.45
RNF40-209ENST00000566703 RTP1P59025 263 aa17.89■□□□□ 0.45
RNF40-209ENST00000566703 MDM2Q00987 491 aaPredicted RBP17.89■□□□□ 0.45
RNF40-209ENST00000566703 LRRC41Q15345 812 aa17.89■□□□□ 0.45
RNF40-209ENST00000566703 C1orf53Q5VUE5 145 aa17.89■□□□□ 0.45
RNF40-209ENST00000566703 IFNL3Q8IZI9 196 aa17.89■□□□□ 0.45
RNF40-209ENST00000566703 EPB41L4AQ9HCS5 686 aaPredicted RBP17.89■□□□□ 0.45
RNF40-209ENST00000566703 CLIP2Q9UDT6 1046 aa17.89■□□□□ 0.45
RNF40-209ENST00000566703 PCDHB15Q9Y5E8 787 aa17.89■□□□□ 0.45
RNF40-209ENST00000566703 MYH7P12883 1935 aa17.89■□□□□ 0.45
RNF40-209ENST00000566703 MYH8P13535 1937 aa17.88■□□□□ 0.45
RNF40-209ENST00000566703 M0R2C6 588 aa17.88■□□□□ 0.45
RNF40-209ENST00000566703 SNX17Q15036 470 aa17.88■□□□□ 0.45
RNF40-209ENST00000566703 ANO1Q5XXA6 986 aa17.88■□□□□ 0.45
RNF40-209ENST00000566703 TSHZ3Q63HK5 1081 aa17.88■□□□□ 0.45
RNF40-209ENST00000566703 PI4K2BQ8TCG2 481 aa17.88■□□□□ 0.45
RNF40-209ENST00000566703 MTMR4Q9NYA4 1195 aa17.88■□□□□ 0.45
RNF40-209ENST00000566703 ZBED4O75132 1171 aa17.87■□□□□ 0.45
RNF40-209ENST00000566703 TTLL1O95922 423 aa17.87■□□□□ 0.45
RNF40-209ENST00000566703 PGK2P07205 417 aa17.87■□□□□ 0.45
RNF40-209ENST00000566703 SLC3A2P08195 630 aaKnown RBP17.87■□□□□ 0.45
RNF40-209ENST00000566703 FDX1P10109 184 aa17.87■□□□□ 0.45
RNF40-209ENST00000566703 RARBP10826 455 aa17.87■□□□□ 0.45
RNF40-209ENST00000566703 PDE4BQ07343 736 aa17.87■□□□□ 0.45
RNF40-209ENST00000566703 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.87■□□□□ 0.45
RNF40-209ENST00000566703 STK11IPQ8N1F8 1099 aa17.87■□□□□ 0.45
RNF40-209ENST00000566703 GMCL1P1Q8NEA9 526 aa17.87■□□□□ 0.45
RNF40-209ENST00000566703 NEDD1Q8NHV4 660 aa17.87■□□□□ 0.45
RNF40-209ENST00000566703 FEM1BQ9UK73 627 aa17.87■□□□□ 0.45
RNF40-209ENST00000566703 ADCYAP1R1P41586 468 aa17.86■□□□□ 0.45
RNF40-209ENST00000566703 FAM47AQ5JRC9 791 aa17.86■□□□□ 0.45
RNF40-209ENST00000566703 PPP4R3BQ5MIZ7 849 aa17.86■□□□□ 0.45
RNF40-209ENST00000566703 ZMYM1Q5SVZ6 1142 aa17.86■□□□□ 0.45
RNF40-209ENST00000566703 RNF180Q86T96 592 aa17.86■□□□□ 0.45
RNF40-209ENST00000566703 DEFB123Q8N688 67 aa17.86■□□□□ 0.45
RNF40-209ENST00000566703 DDX11Q96FC9 970 aa17.86■□□□□ 0.45
RNF40-209ENST00000566703 CEP95Q96GE4 821 aa17.86■□□□□ 0.45
RNF40-209ENST00000566703 NUP88Q99567 741 aaPredicted RBP17.86■□□□□ 0.45
RNF40-209ENST00000566703 XPNPEP3Q9NQH7 507 aa17.86■□□□□ 0.45
RNF40-209ENST00000566703 PHF24Q9UPV7 400 aa17.86■□□□□ 0.45
RNF40-209ENST00000566703 ATP11BQ9Y2G3 1177 aa17.86■□□□□ 0.45
RNF40-209ENST00000566703 CTDP1Q9Y5B0 961 aaPredicted RBP17.86■□□□□ 0.45
RNF40-209ENST00000566703 DNAJC25-GNG10A0A024R161 153 aa17.85■□□□□ 0.45
RNF40-209ENST00000566703 ZNF865P0CJ78 1059 aaPredicted RBP17.85■□□□□ 0.45
RNF40-209ENST00000566703 AKR1A1P14550 325 aa17.85■□□□□ 0.45
RNF40-209ENST00000566703 OAZ1P54368 228 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms