RNA–Protein interactions for RNA: ENST00000566669.1

UBFD1-206, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-206ENST00000566669 GPR153Q6NV75 609 aa33.08■■■□□ 2.89
UBFD1-206ENST00000566669 RIOX2Q8IUF8 465 aa33.08■■■□□ 2.89
UBFD1-206ENST00000566669 OSBP2Q969R2 916 aa33.08■■■□□ 2.89
UBFD1-206ENST00000566669 NACAP1Q9BZK3 213 aa33.08■■■□□ 2.89
UBFD1-206ENST00000566669 PPP1R9AQ9ULJ8 1098 aa33.08■■■□□ 2.89
UBFD1-206ENST00000566669 SEPT4O43236 478 aa33.07■■■□□ 2.88
UBFD1-206ENST00000566669 GPAA1O43292 621 aa33.07■■■□□ 2.88
UBFD1-206ENST00000566669 TMEM132BQ14DG7 1078 aa33.07■■■□□ 2.88
UBFD1-206ENST00000566669 VWA5AO00534 786 aa33.06■■■□□ 2.88
UBFD1-206ENST00000566669 RASA1P20936 1047 aa33.06■■■□□ 2.88
UBFD1-206ENST00000566669 TDO2P48775 406 aa33.06■■■□□ 2.88
UBFD1-206ENST00000566669 DIS3Q9Y2L1 958 aaKnown RBP33.06■■■□□ 2.88
UBFD1-206ENST00000566669 MINDY4BA8MYZ0 360 aa33.05■■■□□ 2.88
UBFD1-206ENST00000566669 COBLO75128 1261 aa33.05■■■□□ 2.88
UBFD1-206ENST00000566669 KCTD2Q14681 263 aa33.05■■■□□ 2.88
UBFD1-206ENST00000566669 ZNF444Q8N0Y2 327 aaPredicted RBP33.05■■■□□ 2.88
UBFD1-206ENST00000566669 PATL2C9JE40 543 aaKnown RBP33.04■■■□□ 2.88
UBFD1-206ENST00000566669 SMIM22K7EJ46 135 aa33.04■■■□□ 2.88
UBFD1-206ENST00000566669 STAT3P40763 770 aa33.04■■■□□ 2.88
UBFD1-206ENST00000566669 MAGEA10P43363 369 aaPredicted RBP33.04■■■□□ 2.88
UBFD1-206ENST00000566669 LRRC26Q2I0M4 334 aa33.04■■■□□ 2.88
UBFD1-206ENST00000566669 MAML3Q96JK9 1138 aa33.04■■■□□ 2.88
UBFD1-206ENST00000566669 MMP19Q99542 508 aa33.04■■■□□ 2.88
UBFD1-206ENST00000566669 GNL3Q9BVP2 549 aaKnown RBP eCLIP33.04■■■□□ 2.88
UBFD1-206ENST00000566669 SENP6Q9GZR1 1112 aaPredicted RBP33.04■■■□□ 2.88
UBFD1-206ENST00000566669 RAD21O60216 631 aa33.03■■■□□ 2.88
UBFD1-206ENST00000566669 APPP05067 770 aa33.03■■■□□ 2.88
UBFD1-206ENST00000566669 SLC3A2P08195 630 aaKnown RBP33.03■■■□□ 2.88
UBFD1-206ENST00000566669 SAMD1Q6SPF0 538 aaPredicted RBP33.03■■■□□ 2.88
UBFD1-206ENST00000566669 TRPV1Q8NER1 839 aa33.03■■■□□ 2.88
UBFD1-206ENST00000566669 ZBTB47Q9UFB7 747 aaPredicted RBP33.03■■■□□ 2.88
UBFD1-206ENST00000566669 KBTBD13C9JR72 458 aa33.02■■■□□ 2.88
UBFD1-206ENST00000566669 SYN1P17600 705 aa33.02■■■□□ 2.88
UBFD1-206ENST00000566669 LRIT3Q3SXY7 679 aa33.02■■■□□ 2.88
UBFD1-206ENST00000566669 FAM83BQ5T0W9 1011 aa33.02■■■□□ 2.88
UBFD1-206ENST00000566669 TDHQ8IZJ6 230 aa33.02■■■□□ 2.88
UBFD1-206ENST00000566669 SLF1Q9BQI6 1058 aa33.02■■■□□ 2.88
UBFD1-206ENST00000566669 SZT2Q5T011 3432 aa33.02■■■□□ 2.88
UBFD1-206ENST00000566669 PPP4R3BQ5MIZ7 849 aa33.01■■■□□ 2.87
UBFD1-206ENST00000566669 PRPF38AQ8NAV1 312 aaKnown RBP33.01■■■□□ 2.87
UBFD1-206ENST00000566669 TEX13BQ9BXU2 312 aa33.01■■■□□ 2.87
UBFD1-206ENST00000566669 UBE2OQ9C0C9 1292 aaKnown RBP33.01■■■□□ 2.87
UBFD1-206ENST00000566669 ZNF214Q9UL59 606 aaPredicted RBP33.01■■■□□ 2.87
UBFD1-206ENST00000566669 F5H6K3 240 aa33■■■□□ 2.87
UBFD1-206ENST00000566669 PDE4BQ07343 736 aa33■■■□□ 2.87
UBFD1-206ENST00000566669 KLRC3Q07444 240 aa33■■■□□ 2.87
UBFD1-206ENST00000566669 TSHZ3Q63HK5 1081 aa33■■■□□ 2.87
UBFD1-206ENST00000566669 FBXO28Q9NVF7 368 aa33■■■□□ 2.87
UBFD1-206ENST00000566669 FRMPD3Q5JV73 1810 aa33■■■□□ 2.87
UBFD1-206ENST00000566669 MSL3Q8N5Y2 521 aaKnown RBP32.99■■■□□ 2.87
UBFD1-206ENST00000566669 MKL1Q969V6 931 aa32.99■■■□□ 2.87
UBFD1-206ENST00000566669 PRKAG2Q9UGJ0 569 aa32.99■■■□□ 2.87
UBFD1-206ENST00000566669 GREB1LQ9C091 1923 aaPredicted RBP32.98■■■□□ 2.87
UBFD1-206ENST00000566669 PARP14Q460N5 1801 aa32.98■■■□□ 2.87
UBFD1-206ENST00000566669 IFNL3Q8IZI9 196 aa32.98■■■□□ 2.87
UBFD1-206ENST00000566669 REPS2Q8NFH8 660 aa32.98■■■□□ 2.87
UBFD1-206ENST00000566669 PI4K2BQ8TCG2 481 aa32.98■■■□□ 2.87
UBFD1-206ENST00000566669 FSD1Q9BTV5 496 aa32.98■■■□□ 2.87
UBFD1-206ENST00000566669 EPB41L4AQ9HCS5 686 aaPredicted RBP32.98■■■□□ 2.87
UBFD1-206ENST00000566669 PCDHB15Q9Y5E8 787 aa32.98■■■□□ 2.87
UBFD1-206ENST00000566669 IGKV6D-41A0A0C4DH26 115 aa32.97■■■□□ 2.87
UBFD1-206ENST00000566669 ATP2A1O14983 1001 aa32.97■■■□□ 2.87
UBFD1-206ENST00000566669 MX1P20591 662 aa32.97■■■□□ 2.87
UBFD1-206ENST00000566669 LBHD1Q9BQE6 289 aaPredicted RBP32.97■■■□□ 2.87
UBFD1-206ENST00000566669 TINF2Q9BSI4 451 aa32.97■■■□□ 2.87
UBFD1-206ENST00000566669 CLIP2Q9UDT6 1046 aa32.97■■■□□ 2.87
UBFD1-206ENST00000566669 CTDP1Q9Y5B0 961 aaPredicted RBP32.97■■■□□ 2.87
UBFD1-206ENST00000566669 M0R2C6 588 aa32.96■■■□□ 2.87
UBFD1-206ENST00000566669 TTLL1O95922 423 aa32.96■■■□□ 2.87
UBFD1-206ENST00000566669 NDUFB10O96000 172 aa32.96■■■□□ 2.87
UBFD1-206ENST00000566669 FDX1P10109 184 aa32.96■■■□□ 2.87
UBFD1-206ENST00000566669 NAPBQ9H115 298 aa32.96■■■□□ 2.87
UBFD1-206ENST00000566669 MTMR4Q9NYA4 1195 aa32.96■■■□□ 2.87
UBFD1-206ENST00000566669 LAMA3Q16787 3333 aa32.95■■■□□ 2.87
UBFD1-206ENST00000566669 ZBED4O75132 1171 aa32.95■■■□□ 2.87
UBFD1-206ENST00000566669 ZNF792Q3KQV3 632 aa32.95■■■□□ 2.87
UBFD1-206ENST00000566669 TICAM2Q86XR7 235 aa32.95■■■□□ 2.87
UBFD1-206ENST00000566669 GMCL1P1Q8NEA9 526 aa32.95■■■□□ 2.87
UBFD1-206ENST00000566669 FEM1BQ9UK73 627 aa32.95■■■□□ 2.87
UBFD1-206ENST00000566669 PLIN4Q96Q06 1357 aa32.95■■■□□ 2.86
UBFD1-206ENST00000566669 RARBP10826 455 aa32.94■■■□□ 2.86
UBFD1-206ENST00000566669 ZMYM1Q5SVZ6 1142 aa32.94■■■□□ 2.86
UBFD1-206ENST00000566669 CNPY2Q9Y2B0 182 aa32.94■■■□□ 2.86
UBFD1-206ENST00000566669 DNAH12Q6ZR08 3092 aa32.94■■■□□ 2.86
UBFD1-206ENST00000566669 SOX1O00570 391 aaPredicted RBP32.93■■■□□ 2.86
UBFD1-206ENST00000566669 TSPY3P0CV98 308 aa32.93■■■□□ 2.86
UBFD1-206ENST00000566669 TSPY8P0CW00 308 aa32.93■■■□□ 2.86
UBFD1-206ENST00000566669 OAZ1P54368 228 aa32.93■■■□□ 2.86
UBFD1-206ENST00000566669 RRP1P56182 461 aaKnown RBP32.93■■■□□ 2.86
UBFD1-206ENST00000566669 GJC2Q5T442 439 aaPredicted RBP32.93■■■□□ 2.86
UBFD1-206ENST00000566669 SNRNP48Q6IEG0 339 aaKnown RBP32.93■■■□□ 2.86
UBFD1-206ENST00000566669 NEDD1Q8NHV4 660 aa32.93■■■□□ 2.86
UBFD1-206ENST00000566669 FBXO40Q9UH90 709 aa32.93■■■□□ 2.86
UBFD1-206ENST00000566669 C1orf53Q5VUE5 145 aa32.92■■■□□ 2.86
UBFD1-206ENST00000566669 DHX30Q7L2E3 1194 aaKnown RBP eCLIP32.92■■■□□ 2.86
UBFD1-206ENST00000566669 STK11IPQ8N1F8 1099 aa32.92■■■□□ 2.86
UBFD1-206ENST00000566669 CEP95Q96GE4 821 aa32.92■■■□□ 2.86
UBFD1-206ENST00000566669 ATN1P54259 1190 aaPredicted RBP32.91■■■□□ 2.86
UBFD1-206ENST00000566669 RTP1P59025 263 aa32.91■■■□□ 2.86
UBFD1-206ENST00000566669 AAMPQ13685 434 aa32.91■■■□□ 2.86
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms