RNA–Protein interactions for RNA: ENST00000566385.2

LINC00562-201, long intergenic non-protein coding RNA 562, humanhuman

BASIC

Gene LINC00562, Length 2,470 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00562-201ENST00000566385 FOXP4Q8IVH2 680 aaPredicted RBP13.07□□□□□ -0.32
LINC00562-201ENST00000566385 CKAP2LQ8IYA6 745 aa13.07□□□□□ -0.32
LINC00562-201ENST00000566385 RNF214Q8ND24 703 aa13.07□□□□□ -0.32
LINC00562-201ENST00000566385 TNFRSF25Q93038 417 aa13.07□□□□□ -0.32
LINC00562-201ENST00000566385 CLIC6Q96NY7 704 aa13.07□□□□□ -0.32
LINC00562-201ENST00000566385 MYOZ2Q9NPC6 264 aa13.07□□□□□ -0.32
LINC00562-201ENST00000566385 RTN4Q9NQC3 1192 aaKnown RBP13.07□□□□□ -0.32
LINC00562-201ENST00000566385 SNHG28P0DPA3 235 aa13.06□□□□□ -0.32
LINC00562-201ENST00000566385 EEF2P13639 858 aaKnown RBP13.06□□□□□ -0.32
LINC00562-201ENST00000566385 KRT2P35908 639 aa13.06□□□□□ -0.32
LINC00562-201ENST00000566385 NLRP5P59047 1200 aa13.06□□□□□ -0.32
LINC00562-201ENST00000566385 L1TD1Q5T7N2 865 aaKnown RBP13.06□□□□□ -0.32
LINC00562-201ENST00000566385 TTBK2Q6IQ55 1244 aa13.06□□□□□ -0.32
LINC00562-201ENST00000566385 FSIP1Q8NA03 581 aa13.06□□□□□ -0.32
LINC00562-201ENST00000566385 ENGASEQ8NFI3 743 aa13.06□□□□□ -0.32
LINC00562-201ENST00000566385 KCNG4Q8TDN1 519 aa13.06□□□□□ -0.32
LINC00562-201ENST00000566385 ZBED3Q96IU2 234 aaPredicted RBP13.06□□□□□ -0.32
LINC00562-201ENST00000566385 GPCPD1Q9NPB8 672 aa13.06□□□□□ -0.32
LINC00562-201ENST00000566385 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.06□□□□□ -0.32
LINC00562-201ENST00000566385 ASTN2O75129 1339 aaPredicted RBP13.06□□□□□ -0.32
LINC00562-201ENST00000566385 RAD21O60216 631 aa13.06□□□□□ -0.32
LINC00562-201ENST00000566385 GNAQP50148 359 aa13.06□□□□□ -0.32
LINC00562-201ENST00000566385 NDUFA8P51970 172 aa13.06□□□□□ -0.32
LINC00562-201ENST00000566385 GRIN1Q05586 938 aa13.06□□□□□ -0.32
LINC00562-201ENST00000566385 KCTD1Q719H9 257 aa13.06□□□□□ -0.32
LINC00562-201ENST00000566385 MIGA2Q7L4E1 593 aa13.06□□□□□ -0.32
LINC00562-201ENST00000566385 SAMD7Q7Z3H4 446 aa13.06□□□□□ -0.32
LINC00562-201ENST00000566385 HEATR3Q7Z4Q2 680 aa13.06□□□□□ -0.32
LINC00562-201ENST00000566385 RASGRP4Q8TDF6 673 aa13.06□□□□□ -0.32
LINC00562-201ENST00000566385 CCDC17Q96LX7 622 aa13.06□□□□□ -0.32
LINC00562-201ENST00000566385 PIGSQ96S52 555 aa13.06□□□□□ -0.32
LINC00562-201ENST00000566385 TRIM34Q9BYJ4 488 aa13.06□□□□□ -0.32
LINC00562-201ENST00000566385 NUP62CLQ9H1M0 184 aa13.06□□□□□ -0.32
LINC00562-201ENST00000566385 TMOD2Q9NZR1 351 aa13.06□□□□□ -0.32
LINC00562-201ENST00000566385 GJA3Q9Y6H8 435 aa13.06□□□□□ -0.32
LINC00562-201ENST00000566385 SLC16A2P36021 539 aa13.05□□□□□ -0.32
LINC00562-201ENST00000566385 FAM151AQ8WW52 585 aa13.05□□□□□ -0.32
LINC00562-201ENST00000566385 ERCC4Q92889 916 aaPredicted RBP13.05□□□□□ -0.32
LINC00562-201ENST00000566385 FUCA2Q9BTY2 467 aa13.05□□□□□ -0.32
LINC00562-201ENST00000566385 SPZ1Q9BXG8 430 aa13.05□□□□□ -0.32
LINC00562-201ENST00000566385 FHDC1Q9C0D6 1143 aaPredicted RBP13.05□□□□□ -0.32
LINC00562-201ENST00000566385 ISY1Q9ULR0 285 aaKnown RBP13.05□□□□□ -0.32
LINC00562-201ENST00000566385 ARFGEF1Q9Y6D6 1849 aa13.05□□□□□ -0.32
LINC00562-201ENST00000566385 FZD9O00144 591 aa13.05□□□□□ -0.32
LINC00562-201ENST00000566385 GH2P01242 217 aa13.05□□□□□ -0.32
LINC00562-201ENST00000566385 SPECC1Q5M775 1068 aa13.05□□□□□ -0.32
LINC00562-201ENST00000566385 MTMR14Q8NCE2 650 aa13.05□□□□□ -0.32
LINC00562-201ENST00000566385 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.05□□□□□ -0.32
LINC00562-201ENST00000566385 STXBP3O00186 592 aa13.04□□□□□ -0.32
LINC00562-201ENST00000566385 GMPSP49915 693 aaPredicted RBP13.04□□□□□ -0.32
LINC00562-201ENST00000566385 ABCB5Q2M3G0 1257 aa13.04□□□□□ -0.32
LINC00562-201ENST00000566385 RILPL1Q5EBL4 403 aa13.04□□□□□ -0.32
LINC00562-201ENST00000566385 SHC4Q6S5L8 630 aa13.04□□□□□ -0.32
LINC00562-201ENST00000566385 PIK3AP1Q6ZUJ8 805 aa13.04□□□□□ -0.32
LINC00562-201ENST00000566385 TNMDQ9H2S6 317 aa13.04□□□□□ -0.32
LINC00562-201ENST00000566385 SPON1Q9HCB6 807 aa13.04□□□□□ -0.32
LINC00562-201ENST00000566385 BARHL2Q9NY43 387 aa13.04□□□□□ -0.32
LINC00562-201ENST00000566385 ZNF541Q9H0D2 1346 aa13.04□□□□□ -0.32
LINC00562-201ENST00000566385 LTBP3Q9NS15 1303 aa13.04□□□□□ -0.32
LINC00562-201ENST00000566385 ZNF543Q08ER8 600 aa13.04□□□□□ -0.32
LINC00562-201ENST00000566385 TNIP1Q15025 636 aa13.04□□□□□ -0.32
LINC00562-201ENST00000566385 MICALL2Q8IY33 904 aa13.04□□□□□ -0.32
LINC00562-201ENST00000566385 FMR1NBQ8N0W7 255 aaPredicted RBP13.04□□□□□ -0.32
LINC00562-201ENST00000566385 MRPS27Q92552 414 aaKnown RBP13.04□□□□□ -0.32
LINC00562-201ENST00000566385 TSPY26PQ9H489 355 aa13.04□□□□□ -0.32
LINC00562-201ENST00000566385 CLSTN2Q9H4D0 955 aa13.04□□□□□ -0.32
LINC00562-201ENST00000566385 RIOX1Q9H6W3 641 aa13.04□□□□□ -0.32
LINC00562-201ENST00000566385 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.04□□□□□ -0.32
LINC00562-201ENST00000566385 DDX19AQ9NUU7 478 aaKnown RBP13.04□□□□□ -0.32
LINC00562-201ENST00000566385 PGAP2Q9UHJ9 254 aa13.04□□□□□ -0.32
LINC00562-201ENST00000566385 A0A1W2PRG0 241 aa13.03□□□□□ -0.32
LINC00562-201ENST00000566385 PPP6R2O75170 966 aa13.03□□□□□ -0.32
LINC00562-201ENST00000566385 ICA1Q05084 483 aa13.03□□□□□ -0.32
LINC00562-201ENST00000566385 FAM160A1Q05DH4 1040 aa13.03□□□□□ -0.32
LINC00562-201ENST00000566385 TBC1D10BQ4KMP7 808 aaPredicted RBP13.03□□□□□ -0.32
LINC00562-201ENST00000566385 KANSL2Q9H9L4 492 aa13.03□□□□□ -0.32
LINC00562-201ENST00000566385 A0A087WWV3 80 aa13.03□□□□□ -0.32
LINC00562-201ENST00000566385 A0A1W2PQ27 194 aa13.03□□□□□ -0.32
LINC00562-201ENST00000566385 A0A1W2PQ64 194 aa13.03□□□□□ -0.32
LINC00562-201ENST00000566385 A0A1W2PQD8 194 aa13.03□□□□□ -0.32
LINC00562-201ENST00000566385 M0R2N6 131 aa13.03□□□□□ -0.32
LINC00562-201ENST00000566385 TMEM179Q6ZVK1 233 aa13.03□□□□□ -0.32
LINC00562-201ENST00000566385 BLIDQ8IZY5 108 aa13.03□□□□□ -0.32
LINC00562-201ENST00000566385 NUP88Q99567 741 aaPredicted RBP13.03□□□□□ -0.32
LINC00562-201ENST00000566385 LZTS2Q9BRK4 669 aa13.03□□□□□ -0.32
LINC00562-201ENST00000566385 CNOT7Q9UIV1 285 aaKnown RBP13.03□□□□□ -0.32
LINC00562-201ENST00000566385 COL2A1P02458 1487 aaPredicted RBP13.03□□□□□ -0.32
LINC00562-201ENST00000566385 ECE1P42892 770 aa13.02□□□□□ -0.32
LINC00562-201ENST00000566385 ZNF280AP59817 542 aaPredicted RBP13.02□□□□□ -0.32
LINC00562-201ENST00000566385 MAP3K11Q16584 847 aa13.02□□□□□ -0.32
LINC00562-201ENST00000566385 CCDC73Q6ZRK6 1079 aa13.02□□□□□ -0.32
LINC00562-201ENST00000566385 ARHGAP27Q6ZUM4 889 aa13.02□□□□□ -0.32
LINC00562-201ENST00000566385 ADGRF4Q8IZF3 695 aa13.02□□□□□ -0.32
LINC00562-201ENST00000566385 MKL1Q969V6 931 aa13.02□□□□□ -0.32
LINC00562-201ENST00000566385 COA7Q96BR5 231 aa13.02□□□□□ -0.32
LINC00562-201ENST00000566385 JMJD4Q9H9V9 463 aa13.02□□□□□ -0.32
LINC00562-201ENST00000566385 NYAP2Q9P242 653 aa13.02□□□□□ -0.32
LINC00562-201ENST00000566385 PCDHA4Q9UN74 947 aa13.02□□□□□ -0.32
LINC00562-201ENST00000566385 MYO1BO43795 1136 aa13.02□□□□□ -0.33
LINC00562-201ENST00000566385 PPP1R11O60927 126 aaPredicted RBP13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms