RNA–Protein interactions for RNA: ENST00000566347.5

CLN6-207, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best) BASIC

Gene CLN6, Length 981 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-207ENST00000566347 LHX8Q68G74 356 aa24.07■■□□□ 1.44
CLN6-207ENST00000566347 SAMD1Q6SPF0 538 aaPredicted RBP24.07■■□□□ 1.44
CLN6-207ENST00000566347 NCAPG2Q86XI2 1143 aa24.07■■□□□ 1.44
CLN6-207ENST00000566347 ZNF444Q8N0Y2 327 aaPredicted RBP24.07■■□□□ 1.44
CLN6-207ENST00000566347 NPLOC4Q8TAT6 608 aa24.07■■□□□ 1.44
CLN6-207ENST00000566347 YTHDC1Q96MU7 727 aaKnown RBP24.07■■□□□ 1.44
CLN6-207ENST00000566347 PCDH10Q9P2E7 1040 aa24.07■■□□□ 1.44
CLN6-207ENST00000566347 ADAMTS5Q9UNA0 930 aa24.07■■□□□ 1.44
CLN6-207ENST00000566347 ALPK3Q96L96 1907 aa24.06■■□□□ 1.44
CLN6-207ENST00000566347 OLFML2BQ68BL8 750 aa24.06■■□□□ 1.44
CLN6-207ENST00000566347 SEC62Q99442 399 aaKnown RBP24.06■■□□□ 1.44
CLN6-207ENST00000566347 PPP1R9AQ9ULJ8 1098 aa24.06■■□□□ 1.44
CLN6-207ENST00000566347 MSCO60682 206 aa24.05■■□□□ 1.44
CLN6-207ENST00000566347 SLC3A2P08195 630 aaKnown RBP24.05■■□□□ 1.44
CLN6-207ENST00000566347 FXR1P51114 621 aaKnown RBP eCLIP24.05■■□□□ 1.44
CLN6-207ENST00000566347 TMEM132BQ14DG7 1078 aa24.05■■□□□ 1.44
CLN6-207ENST00000566347 FAM83BQ5T0W9 1011 aa24.05■■□□□ 1.44
CLN6-207ENST00000566347 NAPBQ9H115 298 aa24.05■■□□□ 1.44
CLN6-207ENST00000566347 FBXO28Q9NVF7 368 aa24.05■■□□□ 1.44
CLN6-207ENST00000566347 STAP2Q9UGK3 403 aa24.05■■□□□ 1.44
CLN6-207ENST00000566347 COL11A1P12107 1806 aaPredicted RBP24.05■■□□□ 1.44
CLN6-207ENST00000566347 IGHA2P01877 340 aa24.04■■□□□ 1.44
CLN6-207ENST00000566347 PDE4BQ07343 736 aa24.04■■□□□ 1.44
CLN6-207ENST00000566347 EVI5LQ96CN4 794 aa24.04■■□□□ 1.44
CLN6-207ENST00000566347 FRMPD3Q5JV73 1810 aa24.03■■□□□ 1.44
CLN6-207ENST00000566347 IGKV6D-41A0A0C4DH26 115 aa24.03■■□□□ 1.44
CLN6-207ENST00000566347 VWA5AO00534 786 aa24.03■■□□□ 1.44
CLN6-207ENST00000566347 PRDM1O75626 825 aa24.03■■□□□ 1.44
CLN6-207ENST00000566347 FCER1AP12319 257 aa24.03■■□□□ 1.44
CLN6-207ENST00000566347 CYP2C19P33261 490 aa24.03■■□□□ 1.44
CLN6-207ENST00000566347 COPB2P35606 906 aa24.03■■□□□ 1.44
CLN6-207ENST00000566347 RIOX2Q8IUF8 465 aa24.03■■□□□ 1.44
CLN6-207ENST00000566347 RBM27Q9P2N5 1060 aaKnown RBP24.03■■□□□ 1.44
CLN6-207ENST00000566347 DDX20Q9UHI6 824 aaKnown RBP24.03■■□□□ 1.44
CLN6-207ENST00000566347 SYNPO2Q9UMS6 1093 aa24.03■■□□□ 1.44
CLN6-207ENST00000566347 MYH4Q9Y623 1939 aa24.02■■□□□ 1.44
CLN6-207ENST00000566347 RANBP2P49792 3224 aaKnown RBP24.02■■□□□ 1.44
CLN6-207ENST00000566347 F5H6K3 240 aa24.02■■□□□ 1.44
CLN6-207ENST00000566347 CNGA1P29973 690 aa24.02■■□□□ 1.44
CLN6-207ENST00000566347 PDE1AP54750 535 aa24.02■■□□□ 1.44
CLN6-207ENST00000566347 KLRC3Q07444 240 aa24.02■■□□□ 1.44
CLN6-207ENST00000566347 SLF1Q9BQI6 1058 aa24.02■■□□□ 1.44
CLN6-207ENST00000566347 PRO3102Q9H379 93 aa24.02■■□□□ 1.44
CLN6-207ENST00000566347 CLIP2Q9UDT6 1046 aa24.02■■□□□ 1.44
CLN6-207ENST00000566347 PLIN4Q96Q06 1357 aa24.02■■□□□ 1.44
CLN6-207ENST00000566347 COBLO75128 1261 aa24.01■■□□□ 1.43
CLN6-207ENST00000566347 TTLL1O95922 423 aa24.01■■□□□ 1.43
CLN6-207ENST00000566347 NDUFB10O96000 172 aa24.01■■□□□ 1.43
CLN6-207ENST00000566347 COL6A1P12109 1028 aa24.01■■□□□ 1.43
CLN6-207ENST00000566347 CYBAP13498 195 aa24.01■■□□□ 1.43
CLN6-207ENST00000566347 STAT3P40763 770 aa24.01■■□□□ 1.43
CLN6-207ENST00000566347 PPARAQ07869 468 aa24.01■■□□□ 1.43
CLN6-207ENST00000566347 C7orf61Q8IZ16 206 aa24.01■■□□□ 1.43
CLN6-207ENST00000566347 MKL1Q969V6 931 aa24.01■■□□□ 1.43
CLN6-207ENST00000566347 CEP95Q96GE4 821 aa24.01■■□□□ 1.43
CLN6-207ENST00000566347 MTMR4Q9NYA4 1195 aa24.01■■□□□ 1.43
CLN6-207ENST00000566347 PFASO15067 1338 aa24.01■■□□□ 1.43
CLN6-207ENST00000566347 TSPY3P0CV98 308 aa24■■□□□ 1.43
CLN6-207ENST00000566347 TSPY8P0CW00 308 aa24■■□□□ 1.43
CLN6-207ENST00000566347 TICAM2Q86XR7 235 aa24■■□□□ 1.43
CLN6-207ENST00000566347 NEDD1Q8NHV4 660 aa24■■□□□ 1.43
CLN6-207ENST00000566347 MMP19Q99542 508 aa24■■□□□ 1.43
CLN6-207ENST00000566347 NUP88Q99567 741 aaPredicted RBP24■■□□□ 1.43
CLN6-207ENST00000566347 ZNF214Q9UL59 606 aaPredicted RBP24■■□□□ 1.43
CLN6-207ENST00000566347 ZNFX1Q9P2E3 1918 aaKnown RBP24■■□□□ 1.43
CLN6-207ENST00000566347 PRPF38AQ8NAV1 312 aaKnown RBP23.99■■□□□ 1.43
CLN6-207ENST00000566347 TRPV1Q8NER1 839 aa23.99■■□□□ 1.43
CLN6-207ENST00000566347 REPS2Q8NFH8 660 aa23.99■■□□□ 1.43
CLN6-207ENST00000566347 MAML3Q96JK9 1138 aa23.99■■□□□ 1.43
CLN6-207ENST00000566347 A0A1W2PPC1 479 aa23.98■■□□□ 1.43
CLN6-207ENST00000566347 KCTD2Q14681 263 aa23.98■■□□□ 1.43
CLN6-207ENST00000566347 PPP4R3BQ5MIZ7 849 aa23.98■■□□□ 1.43
CLN6-207ENST00000566347 GMCL1P1Q8NEA9 526 aa23.98■■□□□ 1.43
CLN6-207ENST00000566347 TEX13BQ9BXU2 312 aa23.98■■□□□ 1.43
CLN6-207ENST00000566347 RWDD1Q9H446 243 aaPredicted RBP23.98■■□□□ 1.43
CLN6-207ENST00000566347 HELLSQ9NRZ9 838 aa23.98■■□□□ 1.43
CLN6-207ENST00000566347 TFAP4Q01664 338 aa23.97■■□□□ 1.43
CLN6-207ENST00000566347 CCDC129Q6ZRS4 1044 aa23.97■■□□□ 1.43
CLN6-207ENST00000566347 SEPT4O43236 478 aa23.96■■□□□ 1.43
CLN6-207ENST00000566347 NRBP1Q9UHY1 535 aa23.96■■□□□ 1.43
CLN6-207ENST00000566347 FEM1BQ9UK73 627 aa23.96■■□□□ 1.43
CLN6-207ENST00000566347 DIS3Q9Y2L1 958 aaKnown RBP23.96■■□□□ 1.43
CLN6-207ENST00000566347 CTDP1Q9Y5B0 961 aaPredicted RBP23.96■■□□□ 1.43
CLN6-207ENST00000566347 DNM1LO00429 736 aa23.95■■□□□ 1.42
CLN6-207ENST00000566347 FOXP2O15409 715 aa23.95■■□□□ 1.42
CLN6-207ENST00000566347 ZBED4O75132 1171 aa23.95■■□□□ 1.42
CLN6-207ENST00000566347 FAM47AQ5JRC9 791 aa23.95■■□□□ 1.42
CLN6-207ENST00000566347 SNRNP48Q6IEG0 339 aaKnown RBP23.95■■□□□ 1.42
CLN6-207ENST00000566347 SMC5Q8IY18 1101 aa23.95■■□□□ 1.42
CLN6-207ENST00000566347 LRRC47Q8N1G4 583 aaKnown RBP23.95■■□□□ 1.42
CLN6-207ENST00000566347 ARRDC4Q8NCT1 418 aa23.95■■□□□ 1.42
CLN6-207ENST00000566347 LNPKQ9C0E8 428 aa23.95■■□□□ 1.42
CLN6-207ENST00000566347 ZMYND8Q9ULU4 1186 aaPredicted RBP23.95■■□□□ 1.42
CLN6-207ENST00000566347 ATP2A1O14983 1001 aa23.94■■□□□ 1.42
CLN6-207ENST00000566347 SLFN13Q68D06 897 aa23.94■■□□□ 1.42
CLN6-207ENST00000566347 ANAPC4Q9UJX5 808 aa23.94■■□□□ 1.42
CLN6-207ENST00000566347 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.94■■□□□ 1.427e-6■■■■■ 33.6
CLN6-207ENST00000566347 PLXNA1Q9UIW2 1896 aa23.94■■□□□ 1.42
CLN6-207ENST00000566347 PGK2P07205 417 aa23.93■■□□□ 1.42
CLN6-207ENST00000566347 BMP3P12645 472 aa23.93■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms