RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 ADAMTS5Q9UNA0 930 aa21.91■■□□□ 1.1
USB1-213ENST00000566292 PLXNA1Q9UIW2 1896 aa21.91■■□□□ 1.1
USB1-213ENST00000566292 PATL2C9JE40 543 aaKnown RBP21.9■■□□□ 1.1
USB1-213ENST00000566292 COBLO75128 1261 aa21.9■■□□□ 1.1
USB1-213ENST00000566292 LRRFIP1Q32MZ4 808 aaKnown RBP21.9■■□□□ 1.1
USB1-213ENST00000566292 DPP9Q86TI2 863 aa21.9■■□□□ 1.1
USB1-213ENST00000566292 NCAPG2Q86XI2 1143 aa21.9■■□□□ 1.1
USB1-213ENST00000566292 IFNL3Q8IZI9 196 aa21.9■■□□□ 1.1
USB1-213ENST00000566292 TRPV1Q8NER1 839 aa21.9■■□□□ 1.1
USB1-213ENST00000566292 FSD1Q9BTV5 496 aa21.9■■□□□ 1.1
USB1-213ENST00000566292 IGKV6D-41A0A0C4DH26 115 aa21.89■■□□□ 1.09
USB1-213ENST00000566292 APPP05067 770 aa21.89■■□□□ 1.09
USB1-213ENST00000566292 COL6A1P12109 1028 aa21.89■■□□□ 1.09
USB1-213ENST00000566292 ZMYM1Q5SVZ6 1142 aa21.89■■□□□ 1.09
USB1-213ENST00000566292 FAM83BQ5T0W9 1011 aa21.89■■□□□ 1.09
USB1-213ENST00000566292 C7orf61Q8IZ16 206 aa21.89■■□□□ 1.09
USB1-213ENST00000566292 MROH8Q9H579 483 aa21.89■■□□□ 1.09
USB1-213ENST00000566292 NYAP2Q9P242 653 aa21.89■■□□□ 1.09
USB1-213ENST00000566292 RAD21O60216 631 aa21.88■■□□□ 1.09
USB1-213ENST00000566292 PRDM1O75626 825 aa21.88■■□□□ 1.09
USB1-213ENST00000566292 ANKRD45Q5TZF3 282 aa21.88■■□□□ 1.09
USB1-213ENST00000566292 OLFML2BQ68BL8 750 aa21.88■■□□□ 1.09
USB1-213ENST00000566292 NUP88Q99567 741 aaPredicted RBP21.88■■□□□ 1.09
USB1-213ENST00000566292 DDX20Q9UHI6 824 aaKnown RBP21.88■■□□□ 1.09
USB1-213ENST00000566292 PPP1R9AQ9ULJ8 1098 aa21.88■■□□□ 1.09
USB1-213ENST00000566292 SZT2Q5T011 3432 aa21.87■■□□□ 1.09
USB1-213ENST00000566292 VWA5AO00534 786 aa21.87■■□□□ 1.09
USB1-213ENST00000566292 CYBAP13498 195 aa21.87■■□□□ 1.09
USB1-213ENST00000566292 ABRAQ8N0Z2 381 aa21.87■■□□□ 1.09
USB1-213ENST00000566292 REPS2Q8NFH8 660 aa21.87■■□□□ 1.09
USB1-213ENST00000566292 SLC25A27O95847 323 aa21.86■■□□□ 1.09
USB1-213ENST00000566292 CNGA1P29973 690 aa21.86■■□□□ 1.09
USB1-213ENST00000566292 HDAC1Q13547 482 aaPredicted RBP21.86■■□□□ 1.09
USB1-213ENST00000566292 YTHDC1Q96MU7 727 aaKnown RBP21.86■■□□□ 1.09
USB1-213ENST00000566292 STAP2Q9UGK3 403 aa21.86■■□□□ 1.09
USB1-213ENST00000566292 ZNF214Q9UL59 606 aaPredicted RBP21.86■■□□□ 1.09
USB1-213ENST00000566292 ZMYND8Q9ULU4 1186 aaPredicted RBP21.86■■□□□ 1.09
USB1-213ENST00000566292 F5H6K3 240 aa21.85■■□□□ 1.09
USB1-213ENST00000566292 NDUFB10O96000 172 aa21.85■■□□□ 1.09
USB1-213ENST00000566292 KLRC3Q07444 240 aa21.85■■□□□ 1.09
USB1-213ENST00000566292 CCDC129Q6ZRS4 1044 aa21.85■■□□□ 1.09
USB1-213ENST00000566292 RIOX2Q8IUF8 465 aa21.85■■□□□ 1.09
USB1-213ENST00000566292 ZNF444Q8N0Y2 327 aaPredicted RBP21.85■■□□□ 1.09
USB1-213ENST00000566292 CEP95Q96GE4 821 aa21.85■■□□□ 1.09
USB1-213ENST00000566292 NACAP1Q9BZK3 213 aa21.85■■□□□ 1.09
USB1-213ENST00000566292 CLIP2Q9UDT6 1046 aa21.85■■□□□ 1.09
USB1-213ENST00000566292 SMCHD1A6NHR9 2005 aa21.85■■□□□ 1.09
USB1-213ENST00000566292 FOXP2O15409 715 aa21.84■■□□□ 1.09
USB1-213ENST00000566292 MSCO60682 206 aa21.84■■□□□ 1.09
USB1-213ENST00000566292 FCER1AP12319 257 aa21.84■■□□□ 1.09
USB1-213ENST00000566292 STAT3P40763 770 aa21.84■■□□□ 1.09
USB1-213ENST00000566292 NAPBQ9H115 298 aa21.84■■□□□ 1.09
USB1-213ENST00000566292 ZNF287Q9HBT7 754 aa21.84■■□□□ 1.09
USB1-213ENST00000566292 MTMR4Q9NYA4 1195 aa21.84■■□□□ 1.09
USB1-213ENST00000566292 PLIN4Q96Q06 1357 aa21.84■■□□□ 1.09
USB1-213ENST00000566292 SYN1P17600 705 aa21.83■■□□□ 1.09
USB1-213ENST00000566292 PDE1AP54750 535 aa21.83■■□□□ 1.09
USB1-213ENST00000566292 PPARAQ07869 468 aa21.83■■□□□ 1.09
USB1-213ENST00000566292 LRRC26Q2I0M4 334 aa21.83■■□□□ 1.09
USB1-213ENST00000566292 MKL1Q969V6 931 aa21.83■■□□□ 1.09
USB1-213ENST00000566292 MAML3Q96JK9 1138 aa21.83■■□□□ 1.09
USB1-213ENST00000566292 MMP19Q99542 508 aa21.83■■□□□ 1.09
USB1-213ENST00000566292 SLF1Q9BQI6 1058 aa21.83■■□□□ 1.09
USB1-213ENST00000566292 SLC5A4Q9NY91 659 aa21.83■■□□□ 1.09
USB1-213ENST00000566292 ZBTB47Q9UFB7 747 aaPredicted RBP21.83■■□□□ 1.09
USB1-213ENST00000566292 DNAH12Q6ZR08 3092 aa21.82■■□□□ 1.08
USB1-213ENST00000566292 PRAMEF19Q5SWL8 479 aa21.82■■□□□ 1.08
USB1-213ENST00000566292 GDF15Q99988 308 aa21.82■■□□□ 1.08
USB1-213ENST00000566292 PGK2P07205 417 aa21.81■■□□□ 1.08
USB1-213ENST00000566292 PDE4BQ07343 736 aa21.81■■□□□ 1.08
USB1-213ENST00000566292 FAM47AQ5JRC9 791 aa21.81■■□□□ 1.08
USB1-213ENST00000566292 ANO1Q5XXA6 986 aa21.81■■□□□ 1.08
USB1-213ENST00000566292 LRRC47Q8N1G4 583 aaKnown RBP21.81■■□□□ 1.08
USB1-213ENST00000566292 NEDD1Q8NHV4 660 aa21.81■■□□□ 1.08
USB1-213ENST00000566292 EVI5LQ96CN4 794 aa21.81■■□□□ 1.08
USB1-213ENST00000566292 A0A1W2PPC1 479 aa21.8■■□□□ 1.08
USB1-213ENST00000566292 SEPT4O43236 478 aa21.8■■□□□ 1.08
USB1-213ENST00000566292 TTLL1O95922 423 aa21.8■■□□□ 1.08
USB1-213ENST00000566292 TSPY3P0CV98 308 aa21.8■■□□□ 1.08
USB1-213ENST00000566292 TSPY8P0CW00 308 aa21.8■■□□□ 1.08
USB1-213ENST00000566292 VPS53Q5VIR6 699 aa21.8■■□□□ 1.08
USB1-213ENST00000566292 PRPF38AQ8NAV1 312 aaKnown RBP21.8■■□□□ 1.08
USB1-213ENST00000566292 SENP6Q9GZR1 1112 aaPredicted RBP21.8■■□□□ 1.08
USB1-213ENST00000566292 DNM1LO00429 736 aa21.79■■□□□ 1.08
USB1-213ENST00000566292 SLC3A2P08195 630 aaKnown RBP21.79■■□□□ 1.08
USB1-213ENST00000566292 BMP8BP34820 402 aa21.79■■□□□ 1.08
USB1-213ENST00000566292 COPB2P35606 906 aa21.79■■□□□ 1.08
USB1-213ENST00000566292 TFAP4Q01664 338 aa21.79■■□□□ 1.08
USB1-213ENST00000566292 KCTD2Q14681 263 aa21.79■■□□□ 1.08
USB1-213ENST00000566292 ZNF792Q3KQV3 632 aa21.79■■□□□ 1.08
USB1-213ENST00000566292 GMCL1P1Q8NEA9 526 aa21.79■■□□□ 1.08
USB1-213ENST00000566292 TEX13BQ9BXU2 312 aa21.79■■□□□ 1.08
USB1-213ENST00000566292 SYNPO2Q9UMS6 1093 aa21.79■■□□□ 1.08
USB1-213ENST00000566292 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.79■■□□□ 1.08
USB1-213ENST00000566292 RIPK3Q9Y572 518 aa21.79■■□□□ 1.08
USB1-213ENST00000566292 TACC3Q9Y6A5 838 aa21.79■■□□□ 1.08
USB1-213ENST00000566292 LAMA3Q16787 3333 aa21.78■■□□□ 1.08
USB1-213ENST00000566292 MAGEA10P43363 369 aaPredicted RBP21.78■■□□□ 1.08
USB1-213ENST00000566292 CTDSPL2Q05D32 466 aa21.78■■□□□ 1.08
USB1-213ENST00000566292 GJC2Q5T442 439 aaPredicted RBP21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms