RNA–Protein interactions for RNA: ENST00000566200.1

ABCA3-204, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 3

Gene ABCA3, Length 1,232 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-204ENST00000566200 KANSL2Q9H9L4 492 aa22.61■■□□□ 1.21
ABCA3-204ENST00000566200 PLXNA1Q9UIW2 1896 aa22.61■■□□□ 1.21
ABCA3-204ENST00000566200 GSG1L2A8MUP6 293 aa22.6■■□□□ 1.21
ABCA3-204ENST00000566200 ATN1P54259 1190 aaPredicted RBP22.6■■□□□ 1.21
ABCA3-204ENST00000566200 MDM2Q00987 491 aaPredicted RBP22.6■■□□□ 1.21
ABCA3-204ENST00000566200 PRAMEF19Q5SWL8 479 aa22.6■■□□□ 1.21
ABCA3-204ENST00000566200 GJC2Q5T442 439 aaPredicted RBP22.6■■□□□ 1.21
ABCA3-204ENST00000566200 TSHZ3Q63HK5 1081 aa22.6■■□□□ 1.21
ABCA3-204ENST00000566200 OSBP2Q969R2 916 aa22.6■■□□□ 1.21
ABCA3-204ENST00000566200 MAML3Q96JK9 1138 aa22.6■■□□□ 1.21
ABCA3-204ENST00000566200 DCTPP1Q9H773 170 aa22.6■■□□□ 1.21
ABCA3-204ENST00000566200 ARPP21Q9UBL0 812 aaPredicted RBP22.6■■□□□ 1.21
ABCA3-204ENST00000566200 SEPT4O43236 478 aa22.59■■□□□ 1.21
ABCA3-204ENST00000566200 SBK1Q52WX2 424 aa22.59■■□□□ 1.21
ABCA3-204ENST00000566200 KBTBD3Q8NAB2 608 aa22.59■■□□□ 1.21
ABCA3-204ENST00000566200 REPS2Q8NFH8 660 aa22.59■■□□□ 1.21
ABCA3-204ENST00000566200 VWA5AO00534 786 aa22.58■■□□□ 1.21
ABCA3-204ENST00000566200 FCER1AP12319 257 aa22.58■■□□□ 1.21
ABCA3-204ENST00000566200 RASA1P20936 1047 aa22.58■■□□□ 1.21
ABCA3-204ENST00000566200 FAM83BQ5T0W9 1011 aa22.58■■□□□ 1.21
ABCA3-204ENST00000566200 GPR153Q6NV75 609 aa22.58■■□□□ 1.21
ABCA3-204ENST00000566200 EPB41L4AQ9HCS5 686 aaPredicted RBP22.58■■□□□ 1.21
ABCA3-204ENST00000566200 ZNF214Q9UL59 606 aaPredicted RBP22.58■■□□□ 1.21
ABCA3-204ENST00000566200 PPP1R9AQ9ULJ8 1098 aa22.58■■□□□ 1.21
ABCA3-204ENST00000566200 ROBO3Q96MS0 1386 aa22.58■■□□□ 1.21
ABCA3-204ENST00000566200 SLC25A27O95847 323 aa22.57■■□□□ 1.2
ABCA3-204ENST00000566200 RTP1P59025 263 aa22.57■■□□□ 1.2
ABCA3-204ENST00000566200 Q7L0L9 218 aa22.57■■□□□ 1.2
ABCA3-204ENST00000566200 RIOX2Q8IUF8 465 aa22.57■■□□□ 1.2
ABCA3-204ENST00000566200 STK11IPQ8N1F8 1099 aa22.57■■□□□ 1.2
ABCA3-204ENST00000566200 GOPCQ9HD26 462 aa22.57■■□□□ 1.2
ABCA3-204ENST00000566200 PGK2P07205 417 aa22.56■■□□□ 1.2
ABCA3-204ENST00000566200 GIMAP6Q6P9H5 292 aa22.56■■□□□ 1.2
ABCA3-204ENST00000566200 APPBP2Q92624 585 aa22.56■■□□□ 1.2
ABCA3-204ENST00000566200 NUP88Q99567 741 aaPredicted RBP22.56■■□□□ 1.2
ABCA3-204ENST00000566200 SLC5A4Q9NY91 659 aa22.56■■□□□ 1.2
ABCA3-204ENST00000566200 SMCHD1A6NHR9 2005 aa22.56■■□□□ 1.2
ABCA3-204ENST00000566200 MYH4Q9Y623 1939 aa22.56■■□□□ 1.2
ABCA3-204ENST00000566200 DEFB123Q8N688 67 aa22.55■■□□□ 1.2
ABCA3-204ENST00000566200 ARRDC4Q8NCT1 418 aa22.55■■□□□ 1.2
ABCA3-204ENST00000566200 MMP19Q99542 508 aa22.55■■□□□ 1.2
ABCA3-204ENST00000566200 MINDY4BA8MYZ0 360 aa22.54■■□□□ 1.2
ABCA3-204ENST00000566200 M0R2C6 588 aa22.54■■□□□ 1.2
ABCA3-204ENST00000566200 RNF113AO15541 343 aaKnown RBP22.54■■□□□ 1.2
ABCA3-204ENST00000566200 GPAA1O43292 621 aa22.54■■□□□ 1.2
ABCA3-204ENST00000566200 STAT3P40763 770 aa22.54■■□□□ 1.2
ABCA3-204ENST00000566200 ZNF792Q3KQV3 632 aa22.54■■□□□ 1.2
ABCA3-204ENST00000566200 FAM47AQ5JRC9 791 aa22.54■■□□□ 1.2
ABCA3-204ENST00000566200 SLC39A5Q6ZMH5 540 aa22.54■■□□□ 1.2
ABCA3-204ENST00000566200 NYAP2Q9P242 653 aa22.54■■□□□ 1.2
ABCA3-204ENST00000566200 IGKV6D-41A0A0C4DH26 115 aa22.53■■□□□ 1.2
ABCA3-204ENST00000566200 KBTBD13C9JR72 458 aa22.53■■□□□ 1.2
ABCA3-204ENST00000566200 RAD21O60216 631 aa22.53■■□□□ 1.2
ABCA3-204ENST00000566200 SNX17Q15036 470 aa22.53■■□□□ 1.2
ABCA3-204ENST00000566200 LRRC41Q15345 812 aa22.53■■□□□ 1.2
ABCA3-204ENST00000566200 ATP11BQ9Y2G3 1177 aa22.53■■□□□ 1.2
ABCA3-204ENST00000566200 F5H6K3 240 aa22.52■■□□□ 1.2
ABCA3-204ENST00000566200 NDUFB10O96000 172 aa22.52■■□□□ 1.2
ABCA3-204ENST00000566200 TAL1P17542 331 aaPredicted RBP22.52■■□□□ 1.2
ABCA3-204ENST00000566200 KLRC3Q07444 240 aa22.52■■□□□ 1.2
ABCA3-204ENST00000566200 TINF2Q9BSI4 451 aa22.52■■□□□ 1.2
ABCA3-204ENST00000566200 MKNK2Q9HBH9 465 aa22.52■■□□□ 1.2
ABCA3-204ENST00000566200 MTMR10Q9NXD2 777 aa22.52■■□□□ 1.2
ABCA3-204ENST00000566200 DIS3Q9Y2L1 958 aaKnown RBP22.52■■□□□ 1.2
ABCA3-204ENST00000566200 MYCNP04198 464 aaPredicted RBP22.51■■□□□ 1.19
ABCA3-204ENST00000566200 ADCYAP1R1P41586 468 aa22.51■■□□□ 1.19
ABCA3-204ENST00000566200 KCTD2Q14681 263 aa22.51■■□□□ 1.19
ABCA3-204ENST00000566200 TRIM60Q495X7 471 aa22.51■■□□□ 1.19
ABCA3-204ENST00000566200 OTUD7AQ8TE49 926 aaPredicted RBP22.51■■□□□ 1.19
ABCA3-204ENST00000566200 GPATCH3Q96I76 525 aa22.51■■□□□ 1.19
ABCA3-204ENST00000566200 SLF1Q9BQI6 1058 aa22.51■■□□□ 1.19
ABCA3-204ENST00000566200 RIPK3Q9Y572 518 aa22.51■■□□□ 1.19
ABCA3-204ENST00000566200 PCDHB15Q9Y5E8 787 aa22.51■■□□□ 1.19
ABCA3-204ENST00000566200 PRDM1O75626 825 aa22.5■■□□□ 1.19
ABCA3-204ENST00000566200 ZFYP08048 801 aaPredicted RBP22.5■■□□□ 1.19
ABCA3-204ENST00000566200 PI4K2BQ8TCG2 481 aa22.5■■□□□ 1.19
ABCA3-204ENST00000566200 FERMT2Q96AC1 680 aa22.5■■□□□ 1.19
ABCA3-204ENST00000566200 SEC62Q99442 399 aaKnown RBP22.5■■□□□ 1.19
ABCA3-204ENST00000566200 LBHD1Q9BQE6 289 aaPredicted RBP22.5■■□□□ 1.19
ABCA3-204ENST00000566200 CLIP2Q9UDT6 1046 aa22.5■■□□□ 1.19
ABCA3-204ENST00000566200 NRBP1Q9UHY1 535 aa22.5■■□□□ 1.19
ABCA3-204ENST00000566200 LAMA2P24043 3122 aaKnown RBP22.49■■□□□ 1.19
ABCA3-204ENST00000566200 ZNF865P0CJ78 1059 aaPredicted RBP22.49■■□□□ 1.19
ABCA3-204ENST00000566200 SLC17A8Q8NDX2 589 aa22.49■■□□□ 1.19
ABCA3-204ENST00000566200 CEP95Q96GE4 821 aa22.49■■□□□ 1.19
ABCA3-204ENST00000566200 TEX13BQ9BXU2 312 aa22.49■■□□□ 1.19
ABCA3-204ENST00000566200 XPNPEP3Q9NQH7 507 aa22.49■■□□□ 1.19
ABCA3-204ENST00000566200 GNAT2P19087 354 aa22.48■■□□□ 1.19
ABCA3-204ENST00000566200 COPB2P35606 906 aa22.48■■□□□ 1.19
ABCA3-204ENST00000566200 TDO2P48775 406 aa22.48■■□□□ 1.19
ABCA3-204ENST00000566200 SNRNP48Q6IEG0 339 aaKnown RBP22.48■■□□□ 1.19
ABCA3-204ENST00000566200 SH3RF1Q7Z6J0 888 aa22.48■■□□□ 1.19
ABCA3-204ENST00000566200 IFNL3Q8IZI9 196 aa22.48■■□□□ 1.19
ABCA3-204ENST00000566200 LENG1Q96BZ8 264 aaPredicted RBP22.48■■□□□ 1.19
ABCA3-204ENST00000566200 PDLIM7Q9NR12 457 aa22.48■■□□□ 1.19
ABCA3-204ENST00000566200 PHF24Q9UPV7 400 aa22.48■■□□□ 1.19
ABCA3-204ENST00000566200 TTC41PQ6P2S7 1318 aa22.48■■□□□ 1.19
ABCA3-204ENST00000566200 DNAJC25-GNG10A0A024R161 153 aa22.47■■□□□ 1.19
ABCA3-204ENST00000566200 PATL2C9JE40 543 aaKnown RBP22.47■■□□□ 1.19
ABCA3-204ENST00000566200 PGK1P00558 417 aa22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms