RNA–Protein interactions for RNA: ENST00000565511.5

RAB40C-209, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-209ENST00000565511 STAP2Q9UGK3 403 aa28.44■■■□□ 2.14
RAB40C-209ENST00000565511 ADAMTS5Q9UNA0 930 aa28.44■■■□□ 2.14
RAB40C-209ENST00000565511 ZFYP08048 801 aaPredicted RBP28.43■■■□□ 2.14
RAB40C-209ENST00000565511 PLXNA1Q9UIW2 1896 aa28.42■■■□□ 2.14
RAB40C-209ENST00000565511 IGKV6D-41A0A0C4DH26 115 aa28.42■■■□□ 2.14
RAB40C-209ENST00000565511 PRDM1O75626 825 aa28.42■■■□□ 2.14
RAB40C-209ENST00000565511 CYBAP13498 195 aa28.42■■■□□ 2.14
RAB40C-209ENST00000565511 NCAPG2Q86XI2 1143 aa28.42■■■□□ 2.14
RAB40C-209ENST00000565511 REPS2Q8NFH8 660 aa28.42■■■□□ 2.14
RAB40C-209ENST00000565511 RAD21O60216 631 aa28.41■■■□□ 2.14
RAB40C-209ENST00000565511 SYN1P17600 705 aa28.41■■■□□ 2.14
RAB40C-209ENST00000565511 TDO2P48775 406 aa28.41■■■□□ 2.14
RAB40C-209ENST00000565511 DDX20Q9UHI6 824 aaKnown RBP28.41■■■□□ 2.14
RAB40C-209ENST00000565511 PPP1R9AQ9ULJ8 1098 aa28.41■■■□□ 2.14
RAB40C-209ENST00000565511 FOXP2O15409 715 aa28.4■■■□□ 2.14
RAB40C-209ENST00000565511 MX1P20591 662 aa28.4■■■□□ 2.14
RAB40C-209ENST00000565511 LRRC26Q2I0M4 334 aa28.4■■■□□ 2.14
RAB40C-209ENST00000565511 ZMYM1Q5SVZ6 1142 aa28.4■■■□□ 2.14
RAB40C-209ENST00000565511 DPP9Q86TI2 863 aa28.4■■■□□ 2.14
RAB40C-209ENST00000565511 IFNL3Q8IZI9 196 aa28.4■■■□□ 2.14
RAB40C-209ENST00000565511 FSD1Q9BTV5 496 aa28.4■■■□□ 2.14
RAB40C-209ENST00000565511 MKNK2Q9HBH9 465 aa28.4■■■□□ 2.14
RAB40C-209ENST00000565511 GOPCQ9HD26 462 aa28.4■■■□□ 2.14
RAB40C-209ENST00000565511 LAMA3Q16787 3333 aa28.4■■■□□ 2.14
RAB40C-209ENST00000565511 CNGA1P29973 690 aa28.39■■■□□ 2.14
RAB40C-209ENST00000565511 OLFML2BQ68BL8 750 aa28.39■■■□□ 2.14
RAB40C-209ENST00000565511 MROH8Q9H579 483 aa28.39■■■□□ 2.14
RAB40C-209ENST00000565511 VWA5AO00534 786 aa28.38■■■□□ 2.13
RAB40C-209ENST00000565511 SOX1O00570 391 aaPredicted RBP28.38■■■□□ 2.13
RAB40C-209ENST00000565511 ERC2O15083 957 aa28.38■■■□□ 2.13
RAB40C-209ENST00000565511 STRNO43815 780 aa28.38■■■□□ 2.13
RAB40C-209ENST00000565511 NDUFB10O96000 172 aa28.38■■■□□ 2.13
RAB40C-209ENST00000565511 CCDC129Q6ZRS4 1044 aa28.38■■■□□ 2.13
RAB40C-209ENST00000565511 GDF15Q99988 308 aa28.38■■■□□ 2.13
RAB40C-209ENST00000565511 NYAP2Q9P242 653 aa28.38■■■□□ 2.13
RAB40C-209ENST00000565511 ZNF214Q9UL59 606 aaPredicted RBP28.38■■■□□ 2.13
RAB40C-209ENST00000565511 PATL2C9JE40 543 aaKnown RBP28.37■■■□□ 2.13
RAB40C-209ENST00000565511 APPP05067 770 aa28.37■■■□□ 2.13
RAB40C-209ENST00000565511 GNAT2P19087 354 aa28.37■■■□□ 2.13
RAB40C-209ENST00000565511 PRAMEF19Q5SWL8 479 aa28.37■■■□□ 2.13
RAB40C-209ENST00000565511 ANO1Q5XXA6 986 aa28.37■■■□□ 2.13
RAB40C-209ENST00000565511 SMCHD1A6NHR9 2005 aa28.36■■■□□ 2.13
RAB40C-209ENST00000565511 RIOX2Q8IUF8 465 aa28.36■■■□□ 2.13
RAB40C-209ENST00000565511 CEP95Q96GE4 821 aa28.36■■■□□ 2.13
RAB40C-209ENST00000565511 F5H6K3 240 aa28.35■■■□□ 2.13
RAB40C-209ENST00000565511 PGK2P07205 417 aa28.35■■■□□ 2.13
RAB40C-209ENST00000565511 KLRC3Q07444 240 aa28.35■■■□□ 2.13
RAB40C-209ENST00000565511 ANKRD45Q5TZF3 282 aa28.35■■■□□ 2.13
RAB40C-209ENST00000565511 ABRAQ8N0Z2 381 aa28.35■■■□□ 2.13
RAB40C-209ENST00000565511 MAML3Q96JK9 1138 aa28.35■■■□□ 2.13
RAB40C-209ENST00000565511 CLIP2Q9UDT6 1046 aa28.35■■■□□ 2.13
RAB40C-209ENST00000565511 TACC3Q9Y6A5 838 aa28.35■■■□□ 2.13
RAB40C-209ENST00000565511 PLIN4Q96Q06 1357 aa28.35■■■□□ 2.13
RAB40C-209ENST00000565511 DNAH12Q6ZR08 3092 aa28.34■■■□□ 2.13
RAB40C-209ENST00000565511 LRRC47Q8N1G4 583 aaKnown RBP28.34■■■□□ 2.13
RAB40C-209ENST00000565511 YTHDC1Q96MU7 727 aaKnown RBP28.34■■■□□ 2.13
RAB40C-209ENST00000565511 SLC25A27O95847 323 aa28.33■■■□□ 2.13
RAB40C-209ENST00000565511 FCER1AP12319 257 aa28.33■■■□□ 2.13
RAB40C-209ENST00000565511 STAT3P40763 770 aa28.33■■■□□ 2.13
RAB40C-209ENST00000565511 MAGEA10P43363 369 aaPredicted RBP28.33■■■□□ 2.13
RAB40C-209ENST00000565511 FAM47AQ5JRC9 791 aa28.33■■■□□ 2.13
RAB40C-209ENST00000565511 MMP19Q99542 508 aa28.33■■■□□ 2.13
RAB40C-209ENST00000565511 SLF1Q9BQI6 1058 aa28.33■■■□□ 2.13
RAB40C-209ENST00000565511 INCENPQ9NQS7 918 aa28.32■■■□□ 2.12
RAB40C-209ENST00000565511 MTMR4Q9NYA4 1195 aa28.32■■■□□ 2.12
RAB40C-209ENST00000565511 RIPK3Q9Y572 518 aa28.32■■■□□ 2.12
RAB40C-209ENST00000565511 PPARAQ07869 468 aa28.31■■■□□ 2.12
RAB40C-209ENST00000565511 HDAC1Q13547 482 aaPredicted RBP28.31■■■□□ 2.12
RAB40C-209ENST00000565511 GJC2Q5T442 439 aaPredicted RBP28.31■■■□□ 2.12
RAB40C-209ENST00000565511 VPS53Q5VIR6 699 aa28.31■■■□□ 2.12
RAB40C-209ENST00000565511 LRCH3Q96II8 777 aa28.31■■■□□ 2.12
RAB40C-209ENST00000565511 SENP6Q9GZR1 1112 aaPredicted RBP28.31■■■□□ 2.12
RAB40C-209ENST00000565511 A0A1W2PPC1 479 aa28.3■■■□□ 2.12
RAB40C-209ENST00000565511 MSCO60682 206 aa28.3■■■□□ 2.12
RAB40C-209ENST00000565511 LRRFIP1Q32MZ4 808 aaKnown RBP28.3■■■□□ 2.12
RAB40C-209ENST00000565511 ZNF792Q3KQV3 632 aa28.3■■■□□ 2.12
RAB40C-209ENST00000565511 ZNF444Q8N0Y2 327 aaPredicted RBP28.3■■■□□ 2.12
RAB40C-209ENST00000565511 NAPBQ9H115 298 aa28.3■■■□□ 2.12
RAB40C-209ENST00000565511 DDX52Q9Y2R4 599 aaKnown RBP eCLIP28.3■■■□□ 2.124e-6■■■□□ 15.8
RAB40C-209ENST00000565511 DNM1LO00429 736 aa28.29■■■□□ 2.12
RAB40C-209ENST00000565511 SEPT4O43236 478 aa28.29■■■□□ 2.12
RAB40C-209ENST00000565511 TAL1P17542 331 aaPredicted RBP28.29■■■□□ 2.12
RAB40C-209ENST00000565511 ATN1P54259 1190 aaPredicted RBP28.29■■■□□ 2.12
RAB40C-209ENST00000565511 PDE1AP54750 535 aa28.29■■■□□ 2.12
RAB40C-209ENST00000565511 NEDD1Q8NHV4 660 aa28.29■■■□□ 2.12
RAB40C-209ENST00000565511 MKL1Q969V6 931 aa28.29■■■□□ 2.12
RAB40C-209ENST00000565511 NACAP1Q9BZK3 213 aa28.29■■■□□ 2.12
RAB40C-209ENST00000565511 MCM3APO60318 1980 aa28.28■■■□□ 2.12
RAB40C-209ENST00000565511 LTBP2Q14767 1821 aa28.28■■■□□ 2.12
RAB40C-209ENST00000565511 BMP8BP34820 402 aa28.28■■■□□ 2.12
RAB40C-209ENST00000565511 CTDSPL2Q05D32 466 aa28.28■■■□□ 2.12
RAB40C-209ENST00000565511 SNRNP48Q6IEG0 339 aaKnown RBP28.28■■■□□ 2.12
RAB40C-209ENST00000565511 TFAP4Q01664 338 aa28.27■■■□□ 2.12
RAB40C-209ENST00000565511 RASGRP2Q7LDG7 609 aa28.27■■■□□ 2.12
RAB40C-209ENST00000565511 CHMP4CQ96CF2 233 aa28.27■■■□□ 2.12
RAB40C-209ENST00000565511 TEX13BQ9BXU2 312 aa28.27■■■□□ 2.12
RAB40C-209ENST00000565511 SLC5A4Q9NY91 659 aa28.27■■■□□ 2.12
RAB40C-209ENST00000565511 TTLL1O95922 423 aa28.26■■■□□ 2.11
RAB40C-209ENST00000565511 KCTD2Q14681 263 aa28.26■■■□□ 2.11
RAB40C-209ENST00000565511 GMCL1P1Q8NEA9 526 aa28.26■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms