RNA–Protein interactions for RNA: ENST00000565471.6

CLN6-206, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,075 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-206ENST00000565471 ALPK3Q96L96 1907 aa23.71■■□□□ 1.39
CLN6-206ENST00000565471 IGKV6D-41A0A0C4DH26 115 aa23.71■■□□□ 1.39
CLN6-206ENST00000565471 SLC25A27O95847 323 aa23.71■■□□□ 1.39
CLN6-206ENST00000565471 CHRDL2Q6WN34 429 aa23.71■■□□□ 1.39
CLN6-206ENST00000565471 DPP9Q86TI2 863 aa23.71■■□□□ 1.39
CLN6-206ENST00000565471 ZNF444Q8N0Y2 327 aaPredicted RBP23.71■■□□□ 1.39
CLN6-206ENST00000565471 EVI5LQ96CN4 794 aa23.71■■□□□ 1.39
CLN6-206ENST00000565471 C11orf49Q9H6J7 331 aa23.71■■□□□ 1.39
CLN6-206ENST00000565471 PPP1R9AQ9ULJ8 1098 aa23.71■■□□□ 1.39
CLN6-206ENST00000565471 TMEM132BQ14DG7 1078 aa23.7■■□□□ 1.38
CLN6-206ENST00000565471 FAM83BQ5T0W9 1011 aa23.7■■□□□ 1.38
CLN6-206ENST00000565471 OLFML2BQ68BL8 750 aa23.7■■□□□ 1.38
CLN6-206ENST00000565471 NCAPG2Q86XI2 1143 aa23.7■■□□□ 1.38
CLN6-206ENST00000565471 NAPBQ9H115 298 aa23.7■■□□□ 1.38
CLN6-206ENST00000565471 FBXO28Q9NVF7 368 aa23.7■■□□□ 1.38
CLN6-206ENST00000565471 SLC5A4Q9NY91 659 aa23.7■■□□□ 1.38
CLN6-206ENST00000565471 SYNPO2Q9UMS6 1093 aa23.7■■□□□ 1.38
CLN6-206ENST00000565471 PLIN4Q96Q06 1357 aa23.69■■□□□ 1.38
CLN6-206ENST00000565471 COL11A1P12107 1806 aaPredicted RBP23.69■■□□□ 1.38
CLN6-206ENST00000565471 VWA5AO00534 786 aa23.69■■□□□ 1.38
CLN6-206ENST00000565471 RAD21O60216 631 aa23.69■■□□□ 1.38
CLN6-206ENST00000565471 MSCO60682 206 aa23.69■■□□□ 1.38
CLN6-206ENST00000565471 SLC3A2P08195 630 aaKnown RBP23.69■■□□□ 1.38
CLN6-206ENST00000565471 PDE1AP54750 535 aa23.69■■□□□ 1.38
CLN6-206ENST00000565471 PDE4BQ07343 736 aa23.69■■□□□ 1.38
CLN6-206ENST00000565471 SAMD1Q6SPF0 538 aaPredicted RBP23.69■■□□□ 1.38
CLN6-206ENST00000565471 RIOX2Q8IUF8 465 aa23.69■■□□□ 1.38
CLN6-206ENST00000565471 FRMPD3Q5JV73 1810 aa23.68■■□□□ 1.38
CLN6-206ENST00000565471 F5H6K3 240 aa23.68■■□□□ 1.38
CLN6-206ENST00000565471 PRDM1O75626 825 aa23.68■■□□□ 1.38
CLN6-206ENST00000565471 FXR1P51114 621 aaKnown RBP eCLIP23.68■■□□□ 1.38
CLN6-206ENST00000565471 KLRC3Q07444 240 aa23.68■■□□□ 1.38
CLN6-206ENST00000565471 TICAM2Q86XR7 235 aa23.68■■□□□ 1.38
CLN6-206ENST00000565471 MKL1Q969V6 931 aa23.68■■□□□ 1.38
CLN6-206ENST00000565471 PRO3102Q9H379 93 aa23.68■■□□□ 1.38
CLN6-206ENST00000565471 MYH4Q9Y623 1939 aa23.67■■□□□ 1.38
CLN6-206ENST00000565471 COBLO75128 1261 aa23.67■■□□□ 1.38
CLN6-206ENST00000565471 NDUFB10O96000 172 aa23.67■■□□□ 1.38
CLN6-206ENST00000565471 COL6A1P12109 1028 aa23.67■■□□□ 1.38
CLN6-206ENST00000565471 FCER1AP12319 257 aa23.67■■□□□ 1.38
CLN6-206ENST00000565471 CYBAP13498 195 aa23.67■■□□□ 1.38
CLN6-206ENST00000565471 CYP2C19P33261 490 aa23.67■■□□□ 1.38
CLN6-206ENST00000565471 COPB2P35606 906 aa23.67■■□□□ 1.38
CLN6-206ENST00000565471 PPARAQ07869 468 aa23.67■■□□□ 1.38
CLN6-206ENST00000565471 REPS2Q8NFH8 660 aa23.67■■□□□ 1.38
CLN6-206ENST00000565471 SLF1Q9BQI6 1058 aa23.67■■□□□ 1.38
CLN6-206ENST00000565471 MTMR4Q9NYA4 1195 aa23.67■■□□□ 1.38
CLN6-206ENST00000565471 PCDH10Q9P2E7 1040 aa23.67■■□□□ 1.38
CLN6-206ENST00000565471 CLIP2Q9UDT6 1046 aa23.67■■□□□ 1.38
CLN6-206ENST00000565471 DDX20Q9UHI6 824 aaKnown RBP23.67■■□□□ 1.38
CLN6-206ENST00000565471 ZNF214Q9UL59 606 aaPredicted RBP23.67■■□□□ 1.38
CLN6-206ENST00000565471 PFASO15067 1338 aa23.66■■□□□ 1.38
CLN6-206ENST00000565471 STAT3P40763 770 aa23.66■■□□□ 1.38
CLN6-206ENST00000565471 NEDD1Q8NHV4 660 aa23.66■■□□□ 1.38
CLN6-206ENST00000565471 CEP95Q96GE4 821 aa23.66■■□□□ 1.38
CLN6-206ENST00000565471 RBM27Q9P2N5 1060 aaKnown RBP23.66■■□□□ 1.38
CLN6-206ENST00000565471 FOXP2O15409 715 aa23.65■■□□□ 1.38
CLN6-206ENST00000565471 TTLL1O95922 423 aa23.65■■□□□ 1.38
CLN6-206ENST00000565471 TSPY3P0CV98 308 aa23.65■■□□□ 1.38
CLN6-206ENST00000565471 TSPY8P0CW00 308 aa23.65■■□□□ 1.38
CLN6-206ENST00000565471 SMC5Q8IY18 1101 aa23.65■■□□□ 1.38
CLN6-206ENST00000565471 TRPV1Q8NER1 839 aa23.65■■□□□ 1.38
CLN6-206ENST00000565471 NUP88Q99567 741 aaPredicted RBP23.65■■□□□ 1.38
CLN6-206ENST00000565471 RWDD1Q9H446 243 aaPredicted RBP23.65■■□□□ 1.38
CLN6-206ENST00000565471 HELLSQ9NRZ9 838 aa23.65■■□□□ 1.38
CLN6-206ENST00000565471 CNGA1P29973 690 aa23.64■■□□□ 1.37
CLN6-206ENST00000565471 CCDC129Q6ZRS4 1044 aa23.64■■□□□ 1.37
CLN6-206ENST00000565471 C7orf61Q8IZ16 206 aa23.64■■□□□ 1.37
CLN6-206ENST00000565471 PRPF38AQ8NAV1 312 aaKnown RBP23.64■■□□□ 1.37
CLN6-206ENST00000565471 GMCL1P1Q8NEA9 526 aa23.64■■□□□ 1.37
CLN6-206ENST00000565471 MAML3Q96JK9 1138 aa23.64■■□□□ 1.37
CLN6-206ENST00000565471 MMP19Q99542 508 aa23.63■■□□□ 1.37
CLN6-206ENST00000565471 ZNFX1Q9P2E3 1918 aaKnown RBP23.63■■□□□ 1.37
CLN6-206ENST00000565471 TFAP4Q01664 338 aa23.62■■□□□ 1.37
CLN6-206ENST00000565471 KCTD2Q14681 263 aa23.62■■□□□ 1.37
CLN6-206ENST00000565471 PPP4R3BQ5MIZ7 849 aa23.62■■□□□ 1.37
CLN6-206ENST00000565471 TEX13BQ9BXU2 312 aa23.62■■□□□ 1.37
CLN6-206ENST00000565471 LNPKQ9C0E8 428 aa23.62■■□□□ 1.37
CLN6-206ENST00000565471 DIS3Q9Y2L1 958 aaKnown RBP23.62■■□□□ 1.37
CLN6-206ENST00000565471 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.62■■□□□ 1.377e-6■■■■■ 33.6
CLN6-206ENST00000565471 TRIOBPQ9H2D6 2365 aa23.62■■□□□ 1.37
CLN6-206ENST00000565471 A0A1W2PPC1 479 aa23.61■■□□□ 1.37
CLN6-206ENST00000565471 ATP2A1O14983 1001 aa23.61■■□□□ 1.37
CLN6-206ENST00000565471 ALX1Q15699 326 aa23.61■■□□□ 1.37
CLN6-206ENST00000565471 FAM47AQ5JRC9 791 aa23.61■■□□□ 1.37
CLN6-206ENST00000565471 NRBP1Q9UHY1 535 aa23.61■■□□□ 1.37
CLN6-206ENST00000565471 ANAPC4Q9UJX5 808 aa23.61■■□□□ 1.37
CLN6-206ENST00000565471 FEM1BQ9UK73 627 aa23.61■■□□□ 1.37
CLN6-206ENST00000565471 SEPT4O43236 478 aa23.6■■□□□ 1.37
CLN6-206ENST00000565471 VPS53Q5VIR6 699 aa23.6■■□□□ 1.37
CLN6-206ENST00000565471 LRRC47Q8N1G4 583 aaKnown RBP23.6■■□□□ 1.37
CLN6-206ENST00000565471 DNM1LO00429 736 aa23.59■■□□□ 1.37
CLN6-206ENST00000565471 ZBED4O75132 1171 aa23.59■■□□□ 1.37
CLN6-206ENST00000565471 ZNF792Q3KQV3 632 aa23.59■■□□□ 1.37
CLN6-206ENST00000565471 MCMDC2Q4G0Z9 681 aa23.59■■□□□ 1.37
CLN6-206ENST00000565471 SLFN13Q68D06 897 aa23.59■■□□□ 1.37
CLN6-206ENST00000565471 SNRNP48Q6IEG0 339 aaKnown RBP23.59■■□□□ 1.37
CLN6-206ENST00000565471 PLXNA1Q9UIW2 1896 aa23.58■■□□□ 1.37
CLN6-206ENST00000565471 A0A0D9SFI3 127 aa23.58■■□□□ 1.37
CLN6-206ENST00000565471 PGK2P07205 417 aa23.58■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms