RNA–Protein interactions for RNA: ENST00000565003.5

CMTM3-209, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-209ENST00000565003 LHX8Q68G74 356 aa11.97□□□□□ -0.49
CMTM3-209ENST00000565003 NECAB2Q7Z6G3 386 aa11.97□□□□□ -0.49
CMTM3-209ENST00000565003 NUP88Q99567 741 aaPredicted RBP11.97□□□□□ -0.49
CMTM3-209ENST00000565003 NACAP1Q9BZK3 213 aa11.97□□□□□ -0.49
CMTM3-209ENST00000565003 LNPKQ9C0E8 428 aa11.97□□□□□ -0.49
CMTM3-209ENST00000565003 NAPBQ9H115 298 aa11.97□□□□□ -0.49
CMTM3-209ENST00000565003 NYAP2Q9P242 653 aa11.97□□□□□ -0.49
CMTM3-209ENST00000565003 PPP1R9AQ9ULJ8 1098 aa11.97□□□□□ -0.49
CMTM3-209ENST00000565003 ADAMTS5Q9UNA0 930 aa11.97□□□□□ -0.49
CMTM3-209ENST00000565003 PLIN4Q96Q06 1357 aa11.96□□□□□ -0.49
CMTM3-209ENST00000565003 FRMPD3Q5JV73 1810 aa11.96□□□□□ -0.49
CMTM3-209ENST00000565003 EVI5O60447 810 aa11.96□□□□□ -0.49
CMTM3-209ENST00000565003 COBLO75128 1261 aa11.96□□□□□ -0.49
CMTM3-209ENST00000565003 NDUFB10O96000 172 aa11.96□□□□□ -0.49
CMTM3-209ENST00000565003 CYP2C19P33261 490 aa11.96□□□□□ -0.49
CMTM3-209ENST00000565003 PPARAQ07869 468 aa11.96□□□□□ -0.49
CMTM3-209ENST00000565003 AAMPQ13685 434 aa11.96□□□□□ -0.49
CMTM3-209ENST00000565003 VPS53Q5VIR6 699 aa11.96□□□□□ -0.49
CMTM3-209ENST00000565003 MFSD14CQ5VZR4 134 aa11.96□□□□□ -0.49
CMTM3-209ENST00000565003 CHRDL2Q6WN34 429 aa11.96□□□□□ -0.49
CMTM3-209ENST00000565003 NCAPG2Q86XI2 1143 aa11.96□□□□□ -0.49
CMTM3-209ENST00000565003 SMC5Q8IY18 1101 aa11.96□□□□□ -0.49
CMTM3-209ENST00000565003 EXOC6Q8TAG9 804 aa11.96□□□□□ -0.49
CMTM3-209ENST00000565003 EVI5LQ96CN4 794 aa11.96□□□□□ -0.49
CMTM3-209ENST00000565003 CEP95Q96GE4 821 aa11.96□□□□□ -0.49
CMTM3-209ENST00000565003 MYH4Q9Y623 1939 aa11.96□□□□□ -0.5
CMTM3-209ENST00000565003 PFASO15067 1338 aa11.95□□□□□ -0.5
CMTM3-209ENST00000565003 TRIOBPQ9H2D6 2365 aa11.95□□□□□ -0.5
CMTM3-209ENST00000565003 F5H6K3 240 aa11.95□□□□□ -0.5
CMTM3-209ENST00000565003 VWA5AO00534 786 aa11.95□□□□□ -0.5
CMTM3-209ENST00000565003 STRNO43815 780 aa11.95□□□□□ -0.5
CMTM3-209ENST00000565003 IGHDP01880 384 aa11.95□□□□□ -0.5
CMTM3-209ENST00000565003 CYBAP13498 195 aa11.95□□□□□ -0.5
CMTM3-209ENST00000565003 KLRC3Q07444 240 aa11.95□□□□□ -0.5
CMTM3-209ENST00000565003 FAM47AQ5JRC9 791 aa11.95□□□□□ -0.5
CMTM3-209ENST00000565003 DPP9Q86TI2 863 aa11.95□□□□□ -0.5
CMTM3-209ENST00000565003 ZNF444Q8N0Y2 327 aaPredicted RBP11.95□□□□□ -0.5
CMTM3-209ENST00000565003 LRRC47Q8N1G4 583 aaKnown RBP11.95□□□□□ -0.5
CMTM3-209ENST00000565003 TRPV1Q8NER1 839 aa11.95□□□□□ -0.5
CMTM3-209ENST00000565003 REPS2Q8NFH8 660 aa11.95□□□□□ -0.5
CMTM3-209ENST00000565003 FAM227BQ96M60 508 aa11.95□□□□□ -0.5
CMTM3-209ENST00000565003 NBPF3Q9H094 633 aa11.95□□□□□ -0.5
CMTM3-209ENST00000565003 MROH8Q9H579 483 aa11.95□□□□□ -0.5
CMTM3-209ENST00000565003 C11orf49Q9H6J7 331 aa11.95□□□□□ -0.5
CMTM3-209ENST00000565003 ZNF287Q9HBT7 754 aa11.95□□□□□ -0.5
CMTM3-209ENST00000565003 MTMR4Q9NYA4 1195 aa11.95□□□□□ -0.5
CMTM3-209ENST00000565003 CLIP2Q9UDT6 1046 aa11.95□□□□□ -0.5
CMTM3-209ENST00000565003 ZNF214Q9UL59 606 aaPredicted RBP11.95□□□□□ -0.5
CMTM3-209ENST00000565003 NR2E3Q9Y5X4 410 aa11.95□□□□□ -0.5
CMTM3-209ENST00000565003 A0A0D9SFI3 127 aa11.94□□□□□ -0.5
CMTM3-209ENST00000565003 FXR1P51114 621 aaKnown RBP eCLIP11.94□□□□□ -0.5
CMTM3-209ENST00000565003 PDE4BQ07343 736 aa11.94□□□□□ -0.5
CMTM3-209ENST00000565003 OLFML2BQ68BL8 750 aa11.94□□□□□ -0.5
CMTM3-209ENST00000565003 B4GALNT3Q6L9W6 998 aa11.94□□□□□ -0.5
CMTM3-209ENST00000565003 RIOX2Q8IUF8 465 aa11.94□□□□□ -0.5
CMTM3-209ENST00000565003 ABRAQ8N0Z2 381 aa11.94□□□□□ -0.5
CMTM3-209ENST00000565003 NEDD1Q8NHV4 660 aa11.94□□□□□ -0.5
CMTM3-209ENST00000565003 MKL1Q969V6 931 aa11.94□□□□□ -0.5
CMTM3-209ENST00000565003 SLF1Q9BQI6 1058 aa11.94□□□□□ -0.5
CMTM3-209ENST00000565003 PRO3102Q9H379 93 aa11.94□□□□□ -0.5
CMTM3-209ENST00000565003 INCENPQ9NQS7 918 aa11.94□□□□□ -0.5
CMTM3-209ENST00000565003 RBM27Q9P2N5 1060 aaKnown RBP11.94□□□□□ -0.5
CMTM3-209ENST00000565003 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.94□□□□□ -0.5
CMTM3-209ENST00000565003 TACC3Q9Y6A5 838 aa11.94□□□□□ -0.5
CMTM3-209ENST00000565003 SLC25A27O95847 323 aa11.93□□□□□ -0.5
CMTM3-209ENST00000565003 TTLL1O95922 423 aa11.93□□□□□ -0.5
CMTM3-209ENST00000565003 SLC3A2P08195 630 aaKnown RBP11.93□□□□□ -0.5
CMTM3-209ENST00000565003 TSPY3P0CV98 308 aa11.93□□□□□ -0.5
CMTM3-209ENST00000565003 TSPY8P0CW00 308 aa11.93□□□□□ -0.5
CMTM3-209ENST00000565003 COL6A1P12109 1028 aa11.93□□□□□ -0.5
CMTM3-209ENST00000565003 FCER1AP12319 257 aa11.93□□□□□ -0.5
CMTM3-209ENST00000565003 CNGA1P29973 690 aa11.93□□□□□ -0.5
CMTM3-209ENST00000565003 STAT3P40763 770 aa11.93□□□□□ -0.5
CMTM3-209ENST00000565003 TFAP4Q01664 338 aa11.93□□□□□ -0.5
CMTM3-209ENST00000565003 CTDSPL2Q05D32 466 aa11.93□□□□□ -0.5
CMTM3-209ENST00000565003 ZNF589Q86UQ0 364 aaPredicted RBP11.93□□□□□ -0.5
CMTM3-209ENST00000565003 CHD1LQ86WJ1 897 aa11.93□□□□□ -0.5
CMTM3-209ENST00000565003 C7orf61Q8IZ16 206 aa11.93□□□□□ -0.5
CMTM3-209ENST00000565003 MMP19Q99542 508 aa11.93□□□□□ -0.5
CMTM3-209ENST00000565003 RWDD1Q9H446 243 aaPredicted RBP11.93□□□□□ -0.5
CMTM3-209ENST00000565003 HELLSQ9NRZ9 838 aa11.93□□□□□ -0.5
CMTM3-209ENST00000565003 DDX20Q9UHI6 824 aaKnown RBP11.93□□□□□ -0.5
CMTM3-209ENST00000565003 SYNPO2Q9UMS6 1093 aa11.93□□□□□ -0.5
CMTM3-209ENST00000565003 PGK2P07205 417 aa11.92□□□□□ -0.5
CMTM3-209ENST00000565003 NMIQ13287 307 aaPredicted RBP11.92□□□□□ -0.5
CMTM3-209ENST00000565003 PLEKHM2Q8IWE5 1019 aa11.92□□□□□ -0.5
CMTM3-209ENST00000565003 GMCL1P1Q8NEA9 526 aa11.92□□□□□ -0.5
CMTM3-209ENST00000565003 MAML3Q96JK9 1138 aa11.92□□□□□ -0.5
CMTM3-209ENST00000565003 TRIM6-TRIM34B2RNG4 842 aa11.91□□□□□ -0.5
CMTM3-209ENST00000565003 NMT2O60551 498 aa11.91□□□□□ -0.5
CMTM3-209ENST00000565003 MSCO60682 206 aa11.91□□□□□ -0.5
CMTM3-209ENST00000565003 NUCB1Q02818 461 aa11.91□□□□□ -0.5
CMTM3-209ENST00000565003 KCTD2Q14681 263 aa11.91□□□□□ -0.5
CMTM3-209ENST00000565003 ALX1Q15699 326 aa11.91□□□□□ -0.5
CMTM3-209ENST00000565003 MCMDC2Q4G0Z9 681 aa11.91□□□□□ -0.5
CMTM3-209ENST00000565003 PRAMEF19Q5SWL8 479 aa11.91□□□□□ -0.5
CMTM3-209ENST00000565003 SLFN13Q68D06 897 aa11.91□□□□□ -0.5
CMTM3-209ENST00000565003 SNRNP48Q6IEG0 339 aaKnown RBP11.91□□□□□ -0.5
CMTM3-209ENST00000565003 PRPF38AQ8NAV1 312 aaKnown RBP11.91□□□□□ -0.5
CMTM3-209ENST00000565003 KIFC2Q96AC6 838 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms