RNA–Protein interactions for RNA: ENST00000564846.1

CLN6-205, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 1,762 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-205ENST00000564846 TBC1D12O60347 775 aa22.5■■□□□ 1.19
CLN6-205ENST00000564846 MRE11P49959 708 aa22.5■■□□□ 1.19
CLN6-205ENST00000564846 ATP2B2Q01814 1243 aa22.5■■□□□ 1.19
CLN6-205ENST00000564846 NPY5RQ15761 445 aa22.5■■□□□ 1.19
CLN6-205ENST00000564846 GPATCH4Q5T3I0 446 aaKnown RBP22.5■■□□□ 1.19
CLN6-205ENST00000564846 RASGRP2Q7LDG7 609 aa22.5■■□□□ 1.19
CLN6-205ENST00000564846 CCDC148Q8NFR7 591 aa22.5■■□□□ 1.19
CLN6-205ENST00000564846 RRP36Q96EU6 259 aaKnown RBP22.5■■□□□ 1.19
CLN6-205ENST00000564846 FHDC1Q9C0D6 1143 aaPredicted RBP22.5■■□□□ 1.19
CLN6-205ENST00000564846 GJA3Q9Y6H8 435 aa22.5■■□□□ 1.19
CLN6-205ENST00000564846 PPP6R2O75170 966 aa22.49■■□□□ 1.19
CLN6-205ENST00000564846 EEF2P13639 858 aaKnown RBP22.49■■□□□ 1.19
CLN6-205ENST00000564846 SEPT2Q15019 361 aa22.49■■□□□ 1.19
CLN6-205ENST00000564846 GALNT17Q6IS24 598 aa22.49■■□□□ 1.19
CLN6-205ENST00000564846 CCAR1Q8IX12 1150 aaKnown RBP22.49■■□□□ 1.19
CLN6-205ENST00000564846 RIOX1Q9H6W3 641 aa22.49■■□□□ 1.19
CLN6-205ENST00000564846 BARHL2Q9NY43 387 aa22.49■■□□□ 1.19
CLN6-205ENST00000564846 DACT1Q9NYF0 836 aa22.49■■□□□ 1.19
CLN6-205ENST00000564846 SHTN1A0MZ66 631 aa22.48■■□□□ 1.19
CLN6-205ENST00000564846 GDF11O95390 407 aa22.48■■□□□ 1.19
CLN6-205ENST00000564846 VEGFAP15692 232 aaPredicted RBP22.48■■□□□ 1.19
CLN6-205ENST00000564846 TOB1P50616 345 aaPredicted RBP22.48■■□□□ 1.19
CLN6-205ENST00000564846 ICA1Q05084 483 aa22.48■■□□□ 1.19
CLN6-205ENST00000564846 ZNF543Q08ER8 600 aa22.48■■□□□ 1.19
CLN6-205ENST00000564846 PTPAQ15257 358 aa22.48■■□□□ 1.19
CLN6-205ENST00000564846 ARHGAP27Q6ZUM4 889 aa22.48■■□□□ 1.19
CLN6-205ENST00000564846 MICALL2Q8IY33 904 aa22.48■■□□□ 1.19
CLN6-205ENST00000564846 TNFRSF25Q93038 417 aa22.48■■□□□ 1.19
CLN6-205ENST00000564846 EIF4ENIF1Q9NRA8 985 aaKnown RBP22.48■■□□□ 1.19
CLN6-205ENST00000564846 SEC63Q9UGP8 760 aaKnown RBP22.48■■□□□ 1.19
CLN6-205ENST00000564846 FRMPD2Q68DX3 1309 aaPredicted RBP22.48■■□□□ 1.19
CLN6-205ENST00000564846 LMNB1P20700 586 aa22.48■■□□□ 1.19
CLN6-205ENST00000564846 TNFAIP1Q13829 316 aa22.48■■□□□ 1.19
CLN6-205ENST00000564846 WWC2Q6AWC2 1192 aa22.48■■□□□ 1.19
CLN6-205ENST00000564846 CCDC73Q6ZRK6 1079 aa22.48■■□□□ 1.19
CLN6-205ENST00000564846 GPKOWQ92917 476 aaPredicted RBP eCLIP22.48■■□□□ 1.19
CLN6-205ENST00000564846 TMEM39BQ9GZU3 492 aa22.48■■□□□ 1.19
CLN6-205ENST00000564846 NUP62CLQ9H1M0 184 aa22.48■■□□□ 1.19
CLN6-205ENST00000564846 GRPEL1Q9HAV7 217 aa22.48■■□□□ 1.19
CLN6-205ENST00000564846 CNOT7Q9UIV1 285 aaKnown RBP22.48■■□□□ 1.19
CLN6-205ENST00000564846 SYNPO2Q9UMS6 1093 aa22.48■■□□□ 1.19
CLN6-205ENST00000564846 GH2P01242 217 aa22.47■■□□□ 1.19
CLN6-205ENST00000564846 HEATR3Q7Z4Q2 680 aa22.47■■□□□ 1.19
CLN6-205ENST00000564846 CCDC12Q8WUD4 166 aaPredicted RBP22.47■■□□□ 1.19
CLN6-205ENST00000564846 hCG_1984214I3L0E3 225 aa22.46■■□□□ 1.19
CLN6-205ENST00000564846 NR1I2O75469 434 aa22.46■■□□□ 1.19
CLN6-205ENST00000564846 SHROOM1Q2M3G4 852 aaPredicted RBP22.46■■□□□ 1.19
CLN6-205ENST00000564846 SIAH1Q8IUQ4 282 aa22.46■■□□□ 1.19
CLN6-205ENST00000564846 ZNF713Q8N859 430 aaPredicted RBP22.46■■□□□ 1.19
CLN6-205ENST00000564846 DCAF4Q8WV16 495 aa22.46■■□□□ 1.19
CLN6-205ENST00000564846 UBA5Q9GZZ9 404 aa22.46■■□□□ 1.19
CLN6-205ENST00000564846 CPVLQ9H3G5 476 aa22.46■■□□□ 1.19
CLN6-205ENST00000564846 PGAP2Q9UHJ9 254 aa22.46■■□□□ 1.19
CLN6-205ENST00000564846 NOL7Q9UMY1 257 aaKnown RBP22.46■■□□□ 1.19
CLN6-205ENST00000564846 PCDHA4Q9UN74 947 aa22.46■■□□□ 1.19
CLN6-205ENST00000564846 CEP131Q9UPN4 1083 aa22.46■■□□□ 1.19
CLN6-205ENST00000564846 ZNF541Q9H0D2 1346 aa22.46■■□□□ 1.19
CLN6-205ENST00000564846 STXBP3O00186 592 aa22.45■■□□□ 1.19
CLN6-205ENST00000564846 BLIDQ8IZY5 108 aa22.45■■□□□ 1.19
CLN6-205ENST00000564846 DAGLBQ8NCG7 672 aa22.45■■□□□ 1.19
CLN6-205ENST00000564846 GMCL1P1Q8NEA9 526 aa22.45■■□□□ 1.19
CLN6-205ENST00000564846 MRPS27Q92552 414 aaKnown RBP22.45■■□□□ 1.19
CLN6-205ENST00000564846 GPCPD1Q9NPB8 672 aa22.45■■□□□ 1.19
CLN6-205ENST00000564846 BAZ2BQ9UIF8 2168 aaKnown RBP22.45■■□□□ 1.18
CLN6-205ENST00000564846 MAP3K10Q02779 954 aa22.45■■□□□ 1.18
CLN6-205ENST00000564846 FAM160A1Q05DH4 1040 aa22.45■■□□□ 1.18
CLN6-205ENST00000564846 RRP1BQ14684 758 aaKnown RBP22.45■■□□□ 1.18
CLN6-205ENST00000564846 CCDC96Q2M329 555 aa22.45■■□□□ 1.18
CLN6-205ENST00000564846 HOMER1Q86YM7 354 aa22.45■■□□□ 1.18
CLN6-205ENST00000564846 FSIP1Q8NA03 581 aa22.45■■□□□ 1.18
CLN6-205ENST00000564846 PIGSQ96S52 555 aa22.45■■□□□ 1.18
CLN6-205ENST00000564846 EGFRP00533 1210 aa22.44■■□□□ 1.18
CLN6-205ENST00000564846 TRAPPC10P48553 1259 aa22.44■■□□□ 1.18
CLN6-205ENST00000564846 RASA3Q14644 834 aa22.44■■□□□ 1.18
CLN6-205ENST00000564846 AXDND1Q5T1B0 1012 aaPredicted RBP22.44■■□□□ 1.18
CLN6-205ENST00000564846 TYW1BQ6NUM6 668 aa22.44■■□□□ 1.18
CLN6-205ENST00000564846 GOLPH3LQ9H4A5 285 aa22.44■■□□□ 1.18
CLN6-205ENST00000564846 CLSTN2Q9H4D0 955 aa22.44■■□□□ 1.18
CLN6-205ENST00000564846 VAT1LQ9HCJ6 419 aa22.44■■□□□ 1.18
CLN6-205ENST00000564846 MORC2Q9Y6X9 1032 aaPredicted RBP22.44■■□□□ 1.18
CLN6-205ENST00000564846 MYH4Q9Y623 1939 aa22.44■■□□□ 1.18
CLN6-205ENST00000564846 TRIM75PA6NK02 468 aa22.43■■□□□ 1.18
CLN6-205ENST00000564846 CMA1P23946 247 aa22.43■■□□□ 1.18
CLN6-205ENST00000564846 MARCKSP29966 332 aaPredicted RBP22.43■■□□□ 1.18
CLN6-205ENST00000564846 JAG1P78504 1218 aa22.43■■□□□ 1.18
CLN6-205ENST00000564846 SLFN13Q68D06 897 aa22.43■■□□□ 1.18
CLN6-205ENST00000564846 ENGASEQ8NFI3 743 aa22.43■■□□□ 1.18
CLN6-205ENST00000564846 TSPY26PQ9H489 355 aa22.43■■□□□ 1.18
CLN6-205ENST00000564846 H7C1D1 291 aa22.43■■□□□ 1.18
CLN6-205ENST00000564846 BMP15O95972 392 aa22.43■■□□□ 1.18
CLN6-205ENST00000564846 SLC1A4P43007 532 aa22.43■■□□□ 1.18
CLN6-205ENST00000564846 NAPAP54920 295 aa22.43■■□□□ 1.18
CLN6-205ENST00000564846 KIF4BQ2VIQ3 1234 aa22.43■■□□□ 1.18
CLN6-205ENST00000564846 EARS2Q5JPH6 523 aaKnown RBP22.43■■□□□ 1.18
CLN6-205ENST00000564846 SAMD7Q7Z3H4 446 aa22.43■■□□□ 1.18
CLN6-205ENST00000564846 GPC2Q8N158 579 aa22.43■■□□□ 1.18
CLN6-205ENST00000564846 ZMYND12Q9H0C1 365 aa22.43■■□□□ 1.18
CLN6-205ENST00000564846 TNMDQ9H2S6 317 aa22.43■■□□□ 1.18
CLN6-205ENST00000564846 PCDHB6Q9Y5E3 794 aa22.43■■□□□ 1.18
CLN6-205ENST00000564846 F5H6K3 240 aa22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms