RNA–Protein interactions for RNA: ENST00000564511.1

TUBGCP4-209, Transcript of tubulin gamma complex associated protein 4, humanhuman

TSL 3

Gene TUBGCP4, Length 588 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-209ENST00000564511 IBTKQ9P2D0 1353 aaPredicted RBP6.81□□□□□ -1.32
TUBGCP4-209ENST00000564511 HTATSF1O43719 755 aaKnown RBP6.8□□□□□ -1.32
TUBGCP4-209ENST00000564511 U2AF1L5P0DN76 240 aaPredicted RBP6.8□□□□□ -1.32
TUBGCP4-209ENST00000564511 CPB1P15086 417 aa6.8□□□□□ -1.32
TUBGCP4-209ENST00000564511 ELNP15502 786 aa6.8□□□□□ -1.32
TUBGCP4-209ENST00000564511 U2AF1Q01081 240 aaKnown RBP eCLIP6.8□□□□□ -1.32
TUBGCP4-209ENST00000564511 PLAURQ03405 335 aa6.8□□□□□ -1.32
TUBGCP4-209ENST00000564511 FKBP5Q13451 457 aaPredicted RBP6.8□□□□□ -1.32
TUBGCP4-209ENST00000564511 ADGRE1Q14246 886 aa6.8□□□□□ -1.32
TUBGCP4-209ENST00000564511 GRIK5Q16478 980 aa6.8□□□□□ -1.32
TUBGCP4-209ENST00000564511 PARP10Q53GL7 1025 aa6.8□□□□□ -1.32
TUBGCP4-209ENST00000564511 COX20Q5RI15 118 aa6.8□□□□□ -1.32
TUBGCP4-209ENST00000564511 DHX32Q7L7V1 743 aaKnown RBP6.8□□□□□ -1.32
TUBGCP4-209ENST00000564511 ZNF296Q8WUU4 475 aaPredicted RBP6.8□□□□□ -1.32
TUBGCP4-209ENST00000564511 CDCA5Q96FF9 252 aa6.8□□□□□ -1.32
TUBGCP4-209ENST00000564511 CFAP53Q96M91 514 aa6.8□□□□□ -1.32
TUBGCP4-209ENST00000564511 LPIN3Q9BQK8 851 aa6.8□□□□□ -1.32
TUBGCP4-209ENST00000564511 DBNDD1Q9H9R9 158 aa6.8□□□□□ -1.32
TUBGCP4-209ENST00000564511 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.8□□□□□ -1.322e-15■■■■■ 372.6
TUBGCP4-209ENST00000564511 KCNQ5Q9NR82 932 aa6.8□□□□□ -1.32
TUBGCP4-209ENST00000564511 NUDCQ9Y266 331 aa6.8□□□□□ -1.32
TUBGCP4-209ENST00000564511 COL3A1P02461 1466 aaPredicted RBP6.79□□□□□ -1.32
TUBGCP4-209ENST00000564511 MKI67P46013 3256 aaKnown RBP6.79□□□□□ -1.32
TUBGCP4-209ENST00000564511 RPS12P25398 132 aaKnown RBP6.79□□□□□ -1.32
TUBGCP4-209ENST00000564511 GRAPQ13588 217 aa6.79□□□□□ -1.32
TUBGCP4-209ENST00000564511 PCSK7Q16549 785 aa6.79□□□□□ -1.32
TUBGCP4-209ENST00000564511 PERM1Q5SV97 790 aa6.79□□□□□ -1.32
TUBGCP4-209ENST00000564511 FBXO46Q6PJ61 603 aaPredicted RBP6.79□□□□□ -1.32
TUBGCP4-209ENST00000564511 SHISA2Q6UWI4 295 aa6.79□□□□□ -1.32
TUBGCP4-209ENST00000564511 RASAL3Q86YV0 1011 aa6.79□□□□□ -1.32
TUBGCP4-209ENST00000564511 FMR1NBQ8N0W7 255 aaPredicted RBP6.79□□□□□ -1.32
TUBGCP4-209ENST00000564511 GRAPLQ8TC17 118 aaPredicted RBP6.79□□□□□ -1.32
TUBGCP4-209ENST00000564511 LENG1Q96BZ8 264 aaPredicted RBP6.79□□□□□ -1.32
TUBGCP4-209ENST00000564511 THUMPD2Q9BTF0 503 aaKnown RBP6.79□□□□□ -1.32
TUBGCP4-209ENST00000564511 GGA3Q9NZ52 723 aa6.79□□□□□ -1.32
TUBGCP4-209ENST00000564511 TRMT112Q9UI30 125 aaKnown RBP6.79□□□□□ -1.32
TUBGCP4-209ENST00000564511 ZMIZ1Q9ULJ6 1067 aa6.79□□□□□ -1.32
TUBGCP4-209ENST00000564511 HTTP42858 3142 aa6.79□□□□□ -1.32
TUBGCP4-209ENST00000564511 ASTN2O75129 1339 aaPredicted RBP6.78□□□□□ -1.32
TUBGCP4-209ENST00000564511 UBE2Q2LH0YL09 131 aa6.78□□□□□ -1.32
TUBGCP4-209ENST00000564511 ECE2O60344 883 aa6.78□□□□□ -1.32
TUBGCP4-209ENST00000564511 RARAP10276 462 aa6.78□□□□□ -1.32
TUBGCP4-209ENST00000564511 EIF4A1P60842 406 aaKnown RBP6.78□□□□□ -1.32
TUBGCP4-209ENST00000564511 RAC1P63000 192 aa6.78□□□□□ -1.32
TUBGCP4-209ENST00000564511 ELOAQ14241 798 aaKnown RBP6.78□□□□□ -1.32
TUBGCP4-209ENST00000564511 MBTPS1Q14703 1052 aa6.78□□□□□ -1.32
TUBGCP4-209ENST00000564511 OCLNQ16625 522 aa6.78□□□□□ -1.32
TUBGCP4-209ENST00000564511 SWI5Q1ZZU3 235 aa6.78□□□□□ -1.32
TUBGCP4-209ENST00000564511 KIF4BQ2VIQ3 1234 aa6.78□□□□□ -1.32
TUBGCP4-209ENST00000564511 ANGEL2Q5VTE6 544 aaKnown RBP6.78□□□□□ -1.32
TUBGCP4-209ENST00000564511 TMC4Q7Z404 712 aa6.78□□□□□ -1.32
TUBGCP4-209ENST00000564511 TREML1Q86YW5 311 aa6.78□□□□□ -1.32
TUBGCP4-209ENST00000564511 PNISRQ8TF01 805 aaKnown RBP6.78□□□□□ -1.32
TUBGCP4-209ENST00000564511 ZNF428Q96B54 188 aa6.78□□□□□ -1.32
TUBGCP4-209ENST00000564511 PCGF6Q9BYE7 350 aa6.78□□□□□ -1.32
TUBGCP4-209ENST00000564511 FRRS1LQ9P0K9 344 aa6.78□□□□□ -1.32
TUBGCP4-209ENST00000564511 CENPFP49454 3210 aa6.77□□□□□ -1.33
TUBGCP4-209ENST00000564511 DYRK3O43781 588 aa6.77□□□□□ -1.33
TUBGCP4-209ENST00000564511 PRMT3O60678 531 aa6.77□□□□□ -1.33
TUBGCP4-209ENST00000564511 EIF2S2P20042 333 aaKnown RBP6.77□□□□□ -1.33
TUBGCP4-209ENST00000564511 FKBP1BP68106 108 aa6.77□□□□□ -1.33
TUBGCP4-209ENST00000564511 GPLD1P80108 840 aa6.77□□□□□ -1.33
TUBGCP4-209ENST00000564511 ELMSAN1Q6PJG2 1045 aa6.77□□□□□ -1.33
TUBGCP4-209ENST00000564511 HFE2Q6ZVN8 426 aa6.77□□□□□ -1.33
TUBGCP4-209ENST00000564511 MOB2Q70IA6 237 aa6.77□□□□□ -1.33
TUBGCP4-209ENST00000564511 NLRP10Q86W26 655 aa6.77□□□□□ -1.33
TUBGCP4-209ENST00000564511 CMTR1Q8N1G2 835 aaKnown RBP6.77□□□□□ -1.33
TUBGCP4-209ENST00000564511 TTC9Q92623 222 aa6.77□□□□□ -1.33
TUBGCP4-209ENST00000564511 EYA3Q99504 573 aa6.77□□□□□ -1.33
TUBGCP4-209ENST00000564511 ZC3H12CQ9C0D7 883 aaKnown RBP6.77□□□□□ -1.33
TUBGCP4-209ENST00000564511 SAP130Q9H0E3 1048 aa6.77□□□□□ -1.33
TUBGCP4-209ENST00000564511 TLR7Q9NYK1 1049 aaKnown RBP6.77□□□□□ -1.33
TUBGCP4-209ENST00000564511 POLLQ9UGP5 575 aa6.77□□□□□ -1.33
TUBGCP4-209ENST00000564511 SZT2Q5T011 3432 aa6.77□□□□□ -1.33
TUBGCP4-209ENST00000564511 SH3TC1Q8TE82 1336 aa6.76□□□□□ -1.33
TUBGCP4-209ENST00000564511 NUP98P52948 1817 aa6.76□□□□□ -1.33
TUBGCP4-209ENST00000564511 FKTNO75072 461 aa6.76□□□□□ -1.33
TUBGCP4-209ENST00000564511 XYLBO75191 536 aa6.76□□□□□ -1.33
TUBGCP4-209ENST00000564511 ANXA1P04083 346 aa6.76□□□□□ -1.33
TUBGCP4-209ENST00000564511 NEFMP07197 916 aa6.76□□□□□ -1.33
TUBGCP4-209ENST00000564511 VIL1P09327 827 aaKnown RBP6.76□□□□□ -1.33
TUBGCP4-209ENST00000564511 PLA2G5P39877 138 aa6.76□□□□□ -1.33
TUBGCP4-209ENST00000564511 TM4SF4P48230 202 aa6.76□□□□□ -1.33
TUBGCP4-209ENST00000564511 GPSM2P81274 684 aa6.76□□□□□ -1.33
TUBGCP4-209ENST00000564511 AIMP1Q12904 312 aaKnown RBP6.76□□□□□ -1.33
TUBGCP4-209ENST00000564511 HSP90AB3PQ58FF7 597 aa6.76□□□□□ -1.33
TUBGCP4-209ENST00000564511 PRAMEF18Q5VWM3 479 aa6.76□□□□□ -1.33
TUBGCP4-209ENST00000564511 TXNRD3Q86VQ6 643 aa6.76□□□□□ -1.33
TUBGCP4-209ENST00000564511 RGL4Q8IZJ4 473 aa6.76□□□□□ -1.33
TUBGCP4-209ENST00000564511 STK32AQ8WU08 396 aa6.76□□□□□ -1.33
TUBGCP4-209ENST00000564511 FAM122AQ96E09 287 aa6.76□□□□□ -1.33
TUBGCP4-209ENST00000564511 SCAF8Q9UPN6 1271 aaKnown RBP6.76□□□□□ -1.33
TUBGCP4-209ENST00000564511 KCNMB2Q9Y691 235 aa6.76□□□□□ -1.33
TUBGCP4-209ENST00000564511 RTL9Q8NET4 1388 aa6.76□□□□□ -1.33
TUBGCP4-209ENST00000564511 NRLP54845 237 aa6.75□□□□□ -1.33
TUBGCP4-209ENST00000564511 ZNF280AP59817 542 aaPredicted RBP6.75□□□□□ -1.33
TUBGCP4-209ENST00000564511 NRG1Q02297 640 aaPredicted RBP6.75□□□□□ -1.33
TUBGCP4-209ENST00000564511 TRIM26Q12899 539 aaPredicted RBP6.75□□□□□ -1.33
TUBGCP4-209ENST00000564511 TCIRG1Q13488 830 aa6.75□□□□□ -1.33
TUBGCP4-209ENST00000564511 PROSER3Q2NL68 480 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms