RNA–Protein interactions for RNA: ENST00000563941.5

MSLN-205, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,109 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-205ENST00000563941 GPKOWQ92917 476 aaPredicted RBP eCLIP22.69■■□□□ 1.22
MSLN-205ENST00000563941 PYM1Q9BRP8 204 aaKnown RBP22.69■■□□□ 1.22
MSLN-205ENST00000563941 NHSQ6T4R5 1651 aa22.68■■□□□ 1.22
MSLN-205ENST00000563941 GOLGA6L9A6NEM1 432 aa22.68■■□□□ 1.22
MSLN-205ENST00000563941 STAG2Q8N3U4 1231 aa22.68■■□□□ 1.22
MSLN-205ENST00000563941 BLZF1Q9H2G9 400 aa22.68■■□□□ 1.22
MSLN-205ENST00000563941 SH3GLB2Q9NR46 395 aa22.68■■□□□ 1.22
MSLN-205ENST00000563941 ROBO3Q96MS0 1386 aa22.68■■□□□ 1.22
MSLN-205ENST00000563941 NAV1Q8NEY1 1877 aa22.68■■□□□ 1.22
MSLN-205ENST00000563941 NT5C2P49902 561 aa22.67■■□□□ 1.22
MSLN-205ENST00000563941 ERCC6LQ2NKX8 1250 aa22.67■■□□□ 1.22
MSLN-205ENST00000563941 ANKS1AQ92625 1134 aa22.67■■□□□ 1.22
MSLN-205ENST00000563941 ADD3Q9UEY8 706 aaKnown RBP22.67■■□□□ 1.22
MSLN-205ENST00000563941 CTNND2Q9UQB3 1225 aa22.67■■□□□ 1.22
MSLN-205ENST00000563941 FAM205AQ6ZU69 1335 aa22.67■■□□□ 1.22
MSLN-205ENST00000563941 AKR1B15C9JRZ8 316 aaPredicted RBP22.67■■□□□ 1.22
MSLN-205ENST00000563941 GRM4Q14833 912 aa22.67■■□□□ 1.22
MSLN-205ENST00000563941 ARL6IP4Q66PJ3 421 aaKnown RBP22.67■■□□□ 1.22
MSLN-205ENST00000563941 MKNK2Q9HBH9 465 aa22.67■■□□□ 1.22
MSLN-205ENST00000563941 PCDHA4Q9UN74 947 aa22.67■■□□□ 1.22
MSLN-205ENST00000563941 LEMD3Q9Y2U8 911 aa22.67■■□□□ 1.22
MSLN-205ENST00000563941 TAF1LQ8IZX4 1826 aa22.67■■□□□ 1.22
MSLN-205ENST00000563941 GTPBP6O43824 516 aaPredicted RBP22.66■■□□□ 1.22
MSLN-205ENST00000563941 GRAPQ13588 217 aa22.66■■□□□ 1.22
MSLN-205ENST00000563941 GRAPLQ8TC17 118 aaPredicted RBP22.66■■□□□ 1.22
MSLN-205ENST00000563941 CTAGE1Q96RT6 745 aa22.66■■□□□ 1.22
MSLN-205ENST00000563941 MTRQ99707 1265 aa22.66■■□□□ 1.22
MSLN-205ENST00000563941 URI1O94763 535 aaPredicted RBP22.66■■□□□ 1.22
MSLN-205ENST00000563941 ZSCAN20P17040 1043 aaPredicted RBP22.66■■□□□ 1.22
MSLN-205ENST00000563941 PBX1P40424 430 aa22.66■■□□□ 1.22
MSLN-205ENST00000563941 GSTO1P78417 241 aa22.66■■□□□ 1.22
MSLN-205ENST00000563941 DIXDC1Q155Q3 683 aa22.66■■□□□ 1.22
MSLN-205ENST00000563941 FAM177A1Q8N128 213 aaPredicted RBP22.66■■□□□ 1.22
MSLN-205ENST00000563941 C4orf32Q8N8J7 132 aa22.66■■□□□ 1.22
MSLN-205ENST00000563941 IGSF22Q8N9C0 903 aa22.66■■□□□ 1.22
MSLN-205ENST00000563941 PANX2Q96RD6 677 aa22.66■■□□□ 1.22
MSLN-205ENST00000563941 USP17L3A6NCW0 530 aa22.65■■□□□ 1.22
MSLN-205ENST00000563941 USP17L4A6NCW7 530 aa22.65■■□□□ 1.22
MSLN-205ENST00000563941 IGSF3O75054 1194 aa22.65■■□□□ 1.22
MSLN-205ENST00000563941 LONP1P36776 959 aaKnown RBP22.65■■□□□ 1.22
MSLN-205ENST00000563941 GRIK5Q16478 980 aa22.65■■□□□ 1.22
MSLN-205ENST00000563941 USP17L1Q7RTZ2 530 aa22.65■■□□□ 1.22
MSLN-205ENST00000563941 AMOTL1Q8IY63 956 aa22.65■■□□□ 1.22
MSLN-205ENST00000563941 MAD2L2Q9UI95 211 aa22.65■■□□□ 1.22
MSLN-205ENST00000563941 PARP3Q9Y6F1 533 aa22.65■■□□□ 1.22
MSLN-205ENST00000563941 BAG3O95817 575 aa22.64■■□□□ 1.22
MSLN-205ENST00000563941 TSPY3P0CV98 308 aa22.64■■□□□ 1.22
MSLN-205ENST00000563941 TSPY8P0CW00 308 aa22.64■■□□□ 1.22
MSLN-205ENST00000563941 GNAQP50148 359 aa22.64■■□□□ 1.22
MSLN-205ENST00000563941 FILIP1LQ4L180 1135 aa22.64■■□□□ 1.22
MSLN-205ENST00000563941 CCDC178Q5BJE1 867 aa22.64■■□□□ 1.22
MSLN-205ENST00000563941 RRAGBQ5VZM2 374 aa22.64■■□□□ 1.22
MSLN-205ENST00000563941 TYW1BQ6NUM6 668 aa22.64■■□□□ 1.22
MSLN-205ENST00000563941 PPFIBP1Q86W92 1011 aa22.64■■□□□ 1.22
MSLN-205ENST00000563941 RASGRP4Q8TDF6 673 aa22.64■■□□□ 1.22
MSLN-205ENST00000563941 SRRTQ9BXP5 876 aaKnown RBP22.64■■□□□ 1.22
MSLN-205ENST00000563941 RBL2Q08999 1139 aa22.64■■□□□ 1.21
MSLN-205ENST00000563941 NFIXQ14938 502 aa22.64■■□□□ 1.21
MSLN-205ENST00000563941 TGFBRAP1Q8WUH2 860 aa22.64■■□□□ 1.21
MSLN-205ENST00000563941 RFC4P35249 363 aa22.63■■□□□ 1.21
MSLN-205ENST00000563941 TXLNAP40222 546 aa22.63■■□□□ 1.21
MSLN-205ENST00000563941 GNG11P61952 73 aa22.63■■□□□ 1.21
MSLN-205ENST00000563941 FAM182BQ5T319 152 aa22.63■■□□□ 1.21
MSLN-205ENST00000563941 ZNF804AQ7Z570 1209 aa22.63■■□□□ 1.21
MSLN-205ENST00000563941 DESI2Q9BSY9 194 aa22.63■■□□□ 1.21
MSLN-205ENST00000563941 TCP11L1Q9NUJ3 509 aa22.63■■□□□ 1.21
MSLN-205ENST00000563941 M0R2N6 131 aa22.63■■□□□ 1.21
MSLN-205ENST00000563941 COBLO75128 1261 aa22.63■■□□□ 1.21
MSLN-205ENST00000563941 PPP4CP60510 307 aa22.63■■□□□ 1.21
MSLN-205ENST00000563941 SLC35G1Q2M3R5 365 aa22.63■■□□□ 1.21
MSLN-205ENST00000563941 ZNF444Q8N0Y2 327 aaPredicted RBP22.63■■□□□ 1.21
MSLN-205ENST00000563941 SLC44A5Q8NCS7 719 aa22.63■■□□□ 1.21
MSLN-205ENST00000563941 WDR24Q96S15 920 aa22.63■■□□□ 1.21
MSLN-205ENST00000563941 RWDD2AQ9UIY3 292 aa22.63■■□□□ 1.21
MSLN-205ENST00000563941 USP21Q9UK80 565 aa22.63■■□□□ 1.21
MSLN-205ENST00000563941 CCDC194A0A1B0GVG4 234 aa22.62■■□□□ 1.21
MSLN-205ENST00000563941 H2AFXP16104 143 aaPredicted RBP22.62■■□□□ 1.21
MSLN-205ENST00000563941 CASQ1P31415 396 aa22.62■■□□□ 1.21
MSLN-205ENST00000563941 MTF1Q14872 753 aa22.62■■□□□ 1.21
MSLN-205ENST00000563941 WWC2Q6AWC2 1192 aa22.62■■□□□ 1.21
MSLN-205ENST00000563941 MNS1Q8NEH6 495 aa22.62■■□□□ 1.21
MSLN-205ENST00000563941 GPR101Q96P66 508 aaPredicted RBP22.62■■□□□ 1.21
MSLN-205ENST00000563941 LY75O60449 1722 aa22.62■■□□□ 1.21
MSLN-205ENST00000563941 SPATA31A6Q5VVP1 1343 aa22.62■■□□□ 1.21
MSLN-205ENST00000563941 SOWAHDA6NJG2 315 aa22.61■■□□□ 1.21
MSLN-205ENST00000563941 CDC25AP30304 524 aa22.61■■□□□ 1.21
MSLN-205ENST00000563941 STAT6P42226 847 aa22.61■■□□□ 1.21
MSLN-205ENST00000563941 ZNF658Q5TYW1 1059 aaPredicted RBP22.61■■□□□ 1.21
MSLN-205ENST00000563941 CCDC148Q8NFR7 591 aa22.61■■□□□ 1.21
MSLN-205ENST00000563941 CPLX3Q8WVH0 158 aa22.61■■□□□ 1.21
MSLN-205ENST00000563941 NAA15Q9BXJ9 866 aaKnown RBP22.61■■□□□ 1.21
MSLN-205ENST00000563941 RMND1Q9NWS8 449 aa22.61■■□□□ 1.21
MSLN-205ENST00000563941 PCDHA6Q9UN73 950 aa22.61■■□□□ 1.21
MSLN-205ENST00000563941 PCDHA8Q9Y5H6 950 aa22.61■■□□□ 1.21
MSLN-205ENST00000563941 CYTH3O43739 400 aa22.61■■□□□ 1.21
MSLN-205ENST00000563941 RPN1P04843 607 aaKnown RBP22.61■■□□□ 1.21
MSLN-205ENST00000563941 LDHCP07864 332 aa22.61■■□□□ 1.21
MSLN-205ENST00000563941 PAK1Q13153 545 aa22.61■■□□□ 1.21
MSLN-205ENST00000563941 KARSQ15046 597 aaKnown RBP22.61■■□□□ 1.21
MSLN-205ENST00000563941 ARHGAP29Q52LW3 1261 aa22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 215.1 ms