RNA–Protein interactions for RNA: ENST00000563917.2

CLN6-203, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-203ENST00000563917 GPAA1O43292 621 aa11.4□□□□□ -0.58
CLN6-203ENST00000563917 STAT3P40763 770 aa11.4□□□□□ -0.58
CLN6-203ENST00000563917 MAGEA10P43363 369 aaPredicted RBP11.4□□□□□ -0.58
CLN6-203ENST00000563917 MNX1P50219 401 aaPredicted RBP11.4□□□□□ -0.58
CLN6-203ENST00000563917 PDE4BQ07343 736 aa11.4□□□□□ -0.58
CLN6-203ENST00000563917 PPP4R3BQ5MIZ7 849 aa11.4□□□□□ -0.58
CLN6-203ENST00000563917 FSD1Q9BTV5 496 aa11.4□□□□□ -0.58
CLN6-203ENST00000563917 PRO3102Q9H379 93 aa11.4□□□□□ -0.58
CLN6-203ENST00000563917 NYAP2Q9P242 653 aa11.4□□□□□ -0.58
CLN6-203ENST00000563917 ISY1Q9ULR0 285 aaKnown RBP11.4□□□□□ -0.58
CLN6-203ENST00000563917 GSG1L2A8MUP6 293 aa11.39□□□□□ -0.59
CLN6-203ENST00000563917 PATL2C9JE40 543 aaKnown RBP11.39□□□□□ -0.59
CLN6-203ENST00000563917 SEPT4O43236 478 aa11.39□□□□□ -0.59
CLN6-203ENST00000563917 ZBED4O75132 1171 aa11.39□□□□□ -0.59
CLN6-203ENST00000563917 CHGBP05060 677 aa11.39□□□□□ -0.59
CLN6-203ENST00000563917 COL6A1P12109 1028 aa11.39□□□□□ -0.59
CLN6-203ENST00000563917 CYBAP13498 195 aa11.39□□□□□ -0.59
CLN6-203ENST00000563917 TMEM132BQ14DG7 1078 aa11.39□□□□□ -0.59
CLN6-203ENST00000563917 KIAA1755Q5JYT7 1200 aa11.39□□□□□ -0.59
CLN6-203ENST00000563917 FAM83BQ5T0W9 1011 aa11.39□□□□□ -0.59
CLN6-203ENST00000563917 TSHZ3Q63HK5 1081 aa11.39□□□□□ -0.59
CLN6-203ENST00000563917 RIOX2Q8IUF8 465 aa11.39□□□□□ -0.59
CLN6-203ENST00000563917 SIAH1Q8IUQ4 282 aa11.39□□□□□ -0.59
CLN6-203ENST00000563917 TDHQ8IZJ6 230 aa11.39□□□□□ -0.59
CLN6-203ENST00000563917 PRPF38AQ8NAV1 312 aaKnown RBP11.39□□□□□ -0.59
CLN6-203ENST00000563917 OSBP2Q969R2 916 aa11.39□□□□□ -0.59
CLN6-203ENST00000563917 DDX11Q96FC9 970 aa11.39□□□□□ -0.59
CLN6-203ENST00000563917 GDF15Q99988 308 aa11.39□□□□□ -0.59
CLN6-203ENST00000563917 SLF1Q9BQI6 1058 aa11.39□□□□□ -0.59
CLN6-203ENST00000563917 NAPBQ9H115 298 aa11.39□□□□□ -0.59
CLN6-203ENST00000563917 NRBP1Q9UHY1 535 aa11.39□□□□□ -0.59
CLN6-203ENST00000563917 PPP1R9AQ9ULJ8 1098 aa11.39□□□□□ -0.59
CLN6-203ENST00000563917 F5H6K3 240 aa11.38□□□□□ -0.59
CLN6-203ENST00000563917 VWA5AO00534 786 aa11.38□□□□□ -0.59
CLN6-203ENST00000563917 COBLO75128 1261 aa11.38□□□□□ -0.59
CLN6-203ENST00000563917 TSPY3P0CV98 308 aa11.38□□□□□ -0.59
CLN6-203ENST00000563917 TSPY8P0CW00 308 aa11.38□□□□□ -0.59
CLN6-203ENST00000563917 RARBP10826 455 aa11.38□□□□□ -0.59
CLN6-203ENST00000563917 SLC4A3P48751 1232 aa11.38□□□□□ -0.59
CLN6-203ENST00000563917 ATN1P54259 1190 aaPredicted RBP11.38□□□□□ -0.59
CLN6-203ENST00000563917 KLRC3Q07444 240 aa11.38□□□□□ -0.59
CLN6-203ENST00000563917 LRRC26Q2I0M4 334 aa11.38□□□□□ -0.59
CLN6-203ENST00000563917 IFNL3Q8IZI9 196 aa11.38□□□□□ -0.59
CLN6-203ENST00000563917 MAML3Q96JK9 1138 aa11.38□□□□□ -0.59
CLN6-203ENST00000563917 TEX13BQ9BXU2 312 aa11.38□□□□□ -0.59
CLN6-203ENST00000563917 FBXO28Q9NVF7 368 aa11.38□□□□□ -0.59
CLN6-203ENST00000563917 CLIP2Q9UDT6 1046 aa11.38□□□□□ -0.59
CLN6-203ENST00000563917 CNPY2Q9Y2B0 182 aa11.38□□□□□ -0.59
CLN6-203ENST00000563917 ZNF236Q9UL36 1845 aa11.37□□□□□ -0.59
CLN6-203ENST00000563917 SMIM22K7EJ46 135 aa11.37□□□□□ -0.59
CLN6-203ENST00000563917 TTLL1O95922 423 aa11.37□□□□□ -0.59
CLN6-203ENST00000563917 MX1P20591 662 aa11.37□□□□□ -0.59
CLN6-203ENST00000563917 RASA1P20936 1047 aa11.37□□□□□ -0.59
CLN6-203ENST00000563917 IKQ13123 557 aaPredicted RBP11.37□□□□□ -0.59
CLN6-203ENST00000563917 GJC2Q5T442 439 aaPredicted RBP11.37□□□□□ -0.59
CLN6-203ENST00000563917 ANO1Q5XXA6 986 aa11.37□□□□□ -0.59
CLN6-203ENST00000563917 SNRNP48Q6IEG0 339 aaKnown RBP11.37□□□□□ -0.59
CLN6-203ENST00000563917 RNF180Q86T96 592 aa11.37□□□□□ -0.59
CLN6-203ENST00000563917 SYNPO2Q9UMS6 1093 aa11.37□□□□□ -0.59
CLN6-203ENST00000563917 ADAMTS5Q9UNA0 930 aa11.37□□□□□ -0.59
CLN6-203ENST00000563917 ATP11BQ9Y2G3 1177 aa11.37□□□□□ -0.59
CLN6-203ENST00000563917 DIS3Q9Y2L1 958 aaKnown RBP11.37□□□□□ -0.59
CLN6-203ENST00000563917 ROBO3Q96MS0 1386 aa11.37□□□□□ -0.59
CLN6-203ENST00000563917 ALPK3Q96L96 1907 aa11.37□□□□□ -0.59
CLN6-203ENST00000563917 A0A0G2JMZ2 1700 aa11.36□□□□□ -0.59
CLN6-203ENST00000563917 M0R2C6 588 aa11.36□□□□□ -0.59
CLN6-203ENST00000563917 PRDM1O75626 825 aa11.36□□□□□ -0.59
CLN6-203ENST00000563917 NDUFB10O96000 172 aa11.36□□□□□ -0.59
CLN6-203ENST00000563917 FDX1P10109 184 aa11.36□□□□□ -0.59
CLN6-203ENST00000563917 RTP1P59025 263 aa11.36□□□□□ -0.59
CLN6-203ENST00000563917 MDM2Q00987 491 aaPredicted RBP11.36□□□□□ -0.59
CLN6-203ENST00000563917 ANKRD45Q5TZF3 282 aa11.36□□□□□ -0.59
CLN6-203ENST00000563917 GPR153Q6NV75 609 aa11.36□□□□□ -0.59
CLN6-203ENST00000563917 CPXCR1Q8N123 301 aa11.36□□□□□ -0.59
CLN6-203ENST00000563917 TRPV1Q8NER1 839 aa11.36□□□□□ -0.59
CLN6-203ENST00000563917 KIFC2Q96AC6 838 aa11.36□□□□□ -0.59
CLN6-203ENST00000563917 NUP88Q99567 741 aaPredicted RBP11.36□□□□□ -0.59
CLN6-203ENST00000563917 TINF2Q9BSI4 451 aa11.36□□□□□ -0.59
CLN6-203ENST00000563917 XPNPEP3Q9NQH7 507 aa11.36□□□□□ -0.59
CLN6-203ENST00000563917 PRDM5Q9NQX1 630 aaPredicted RBP11.36□□□□□ -0.59
CLN6-203ENST00000563917 FBXO40Q9UH90 709 aa11.36□□□□□ -0.59
CLN6-203ENST00000563917 FEM1BQ9UK73 627 aa11.36□□□□□ -0.59
CLN6-203ENST00000563917 PGK2P07205 417 aa11.35□□□□□ -0.59
CLN6-203ENST00000563917 BMP3P12645 472 aa11.35□□□□□ -0.59
CLN6-203ENST00000563917 AKR1A1P14550 325 aa11.35□□□□□ -0.59
CLN6-203ENST00000563917 RRP1P56182 461 aaKnown RBP11.35□□□□□ -0.59
CLN6-203ENST00000563917 LRIT3Q3SXY7 679 aa11.35□□□□□ -0.59
CLN6-203ENST00000563917 PRAMEF19Q5SWL8 479 aa11.35□□□□□ -0.59
CLN6-203ENST00000563917 SLC39A5Q6ZMH5 540 aa11.35□□□□□ -0.59
CLN6-203ENST00000563917 ANKRD35Q8N283 1001 aa11.35□□□□□ -0.59
CLN6-203ENST00000563917 MSL3Q8N5Y2 521 aaKnown RBP11.35□□□□□ -0.59
CLN6-203ENST00000563917 MKL1Q969V6 931 aa11.35□□□□□ -0.59
CLN6-203ENST00000563917 CEP95Q96GE4 821 aa11.35□□□□□ -0.59
CLN6-203ENST00000563917 LRCH3Q96II8 777 aa11.35□□□□□ -0.59
CLN6-203ENST00000563917 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.35□□□□□ -0.59
CLN6-203ENST00000563917 EPB41L4AQ9HCS5 686 aaPredicted RBP11.35□□□□□ -0.59
CLN6-203ENST00000563917 MTMR4Q9NYA4 1195 aa11.35□□□□□ -0.59
CLN6-203ENST00000563917 ZNF214Q9UL59 606 aaPredicted RBP11.35□□□□□ -0.59
CLN6-203ENST00000563917 PCDHB15Q9Y5E8 787 aa11.35□□□□□ -0.59
CLN6-203ENST00000563917 TSPY2A6NKD2 308 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms