RNA–Protein interactions for RNA: ENST00000562325.5

CDH11-203, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-203ENST00000562325 TRIM60Q495X7 471 aa23.32■■□□□ 1.32
CDH11-203ENST00000562325 RNF180Q86T96 592 aa23.32■■□□□ 1.32
CDH11-203ENST00000562325 SPICE1Q8N0Z3 855 aa23.32■■□□□ 1.32
CDH11-203ENST00000562325 MSL3Q8N5Y2 521 aaKnown RBP23.32■■□□□ 1.32
CDH11-203ENST00000562325 PANK1Q8TE04 598 aa23.32■■□□□ 1.32
CDH11-203ENST00000562325 DYNLL2Q96FJ2 89 aa23.32■■□□□ 1.32
CDH11-203ENST00000562325 GOPCQ9HD26 462 aa23.32■■□□□ 1.32
CDH11-203ENST00000562325 DDX19BQ9UMR2 479 aa23.32■■□□□ 1.32
CDH11-203ENST00000562325 TACC3Q9Y6A5 838 aa23.32■■□□□ 1.32
CDH11-203ENST00000562325 ZBED9Q6R2W3 1325 aa23.32■■□□□ 1.32
CDH11-203ENST00000562325 ADCYAP1R1P41586 468 aa23.31■■□□□ 1.32
CDH11-203ENST00000562325 KCTD2Q14681 263 aa23.31■■□□□ 1.32
CDH11-203ENST00000562325 SHHQ15465 462 aa23.31■■□□□ 1.32
CDH11-203ENST00000562325 FAM47AQ5JRC9 791 aa23.31■■□□□ 1.32
CDH11-203ENST00000562325 ZSCAN25Q6NSZ9 544 aa23.31■■□□□ 1.32
CDH11-203ENST00000562325 MMP19Q99542 508 aa23.31■■□□□ 1.32
CDH11-203ENST00000562325 HAUS7Q99871 368 aa23.31■■□□□ 1.32
CDH11-203ENST00000562325 TINF2Q9BSI4 451 aa23.31■■□□□ 1.32
CDH11-203ENST00000562325 XPNPEP3Q9NQH7 507 aa23.31■■□□□ 1.32
CDH11-203ENST00000562325 TMEM265A0A087WTH1 108 aa23.3■■□□□ 1.32
CDH11-203ENST00000562325 VWA5AO00534 786 aa23.3■■□□□ 1.32
CDH11-203ENST00000562325 PRDM5Q9NQX1 630 aaPredicted RBP23.3■■□□□ 1.32
CDH11-203ENST00000562325 ZBTB40Q9NUA8 1239 aa23.3■■□□□ 1.32
CDH11-203ENST00000562325 PPP1R9AQ9ULJ8 1098 aa23.3■■□□□ 1.32
CDH11-203ENST00000562325 USP17L12C9JPN9 530 aa23.29■■□□□ 1.32
CDH11-203ENST00000562325 USP17L21D6R901 530 aa23.29■■□□□ 1.32
CDH11-203ENST00000562325 STAT3P40763 770 aa23.29■■□□□ 1.32
CDH11-203ENST00000562325 ZNF792Q3KQV3 632 aa23.29■■□□□ 1.32
CDH11-203ENST00000562325 BADQ92934 168 aa23.29■■□□□ 1.32
CDH11-203ENST00000562325 ZNF214Q9UL59 606 aaPredicted RBP23.29■■□□□ 1.32
CDH11-203ENST00000562325 MYH8P13535 1937 aa23.29■■□□□ 1.32
CDH11-203ENST00000562325 PARP14Q460N5 1801 aa23.29■■□□□ 1.32
CDH11-203ENST00000562325 PRKAB2O43741 272 aa23.28■■□□□ 1.32
CDH11-203ENST00000562325 EEF2P13639 858 aaKnown RBP23.28■■□□□ 1.32
CDH11-203ENST00000562325 AKR1A1P14550 325 aa23.28■■□□□ 1.32
CDH11-203ENST00000562325 PRAMEF19Q5SWL8 479 aa23.28■■□□□ 1.32
CDH11-203ENST00000562325 ANO1Q5XXA6 986 aa23.28■■□□□ 1.32
CDH11-203ENST00000562325 SIRT2Q8IXJ6 389 aa23.28■■□□□ 1.32
CDH11-203ENST00000562325 TSEN34Q9BSV6 310 aaKnown RBP23.28■■□□□ 1.32
CDH11-203ENST00000562325 ARPP21Q9UBL0 812 aaPredicted RBP23.28■■□□□ 1.32
CDH11-203ENST00000562325 TLE2Q04725 743 aa23.27■■□□□ 1.32
CDH11-203ENST00000562325 C9orf50Q5SZB4 431 aa23.27■■□□□ 1.32
CDH11-203ENST00000562325 CLEC10AQ8IUN9 316 aa23.27■■□□□ 1.32
CDH11-203ENST00000562325 COL25A1Q9BXS0 654 aaPredicted RBP23.27■■□□□ 1.32
CDH11-203ENST00000562325 BOLA2Q9H3K6 86 aa23.27■■□□□ 1.32
CDH11-203ENST00000562325 SEMA6BQ9H3T3 888 aa23.27■■□□□ 1.32
CDH11-203ENST00000562325 TRIM43BA6NCK2 446 aa23.26■■□□□ 1.31
CDH11-203ENST00000562325 KIAA0355O15063 1070 aa23.26■■□□□ 1.31
CDH11-203ENST00000562325 CLTBP09497 229 aa23.26■■□□□ 1.31
CDH11-203ENST00000562325 GIMAP6Q6P9H5 292 aa23.26■■□□□ 1.31
CDH11-203ENST00000562325 REPS2Q8NFH8 660 aa23.26■■□□□ 1.31
CDH11-203ENST00000562325 TRIM43Q96BQ3 446 aaPredicted RBP23.26■■□□□ 1.31
CDH11-203ENST00000562325 TOX2Q96NM4 488 aa23.26■■□□□ 1.31
CDH11-203ENST00000562325 CDX2Q99626 313 aaPredicted RBP23.26■■□□□ 1.31
CDH11-203ENST00000562325 TEX13BQ9BXU2 312 aa23.26■■□□□ 1.31
CDH11-203ENST00000562325 CNPY2Q9Y2B0 182 aa23.26■■□□□ 1.31
CDH11-203ENST00000562325 SYNGAP1Q96PV0 1343 aa23.26■■□□□ 1.31
CDH11-203ENST00000562325 APBB1O00213 710 aa23.25■■□□□ 1.31
CDH11-203ENST00000562325 ATP2A1O14983 1001 aa23.25■■□□□ 1.31
CDH11-203ENST00000562325 MYCNP04198 464 aaPredicted RBP23.25■■□□□ 1.31
CDH11-203ENST00000562325 CTR9Q6PD62 1173 aa23.25■■□□□ 1.31
CDH11-203ENST00000562325 ANKRD33Q7Z3H0 272 aa23.25■■□□□ 1.31
CDH11-203ENST00000562325 FERMT2Q96AC1 680 aa23.25■■□□□ 1.31
CDH11-203ENST00000562325 FAM161BQ96MY7 647 aa23.25■■□□□ 1.31
CDH11-203ENST00000562325 FBXO28Q9NVF7 368 aa23.25■■□□□ 1.31
CDH11-203ENST00000562325 SYNPO2Q9UMS6 1093 aa23.25■■□□□ 1.31
CDH11-203ENST00000562325 SLC4A4Q9Y6R1 1079 aa23.25■■□□□ 1.31
CDH11-203ENST00000562325 VCANP13611 3396 aa23.24■■□□□ 1.31
CDH11-203ENST00000562325 CDH23Q9H251 3354 aa23.24■■□□□ 1.31
CDH11-203ENST00000562325 MOXD2PA6NHM9 499 aa23.24■■□□□ 1.31
CDH11-203ENST00000562325 ZNF865P0CJ78 1059 aaPredicted RBP23.24■■□□□ 1.31
CDH11-203ENST00000562325 SBK1Q52WX2 424 aa23.24■■□□□ 1.31
CDH11-203ENST00000562325 MAMDC4Q6UXC1 1216 aa23.24■■□□□ 1.31
CDH11-203ENST00000562325 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.24■■□□□ 1.31
CDH11-203ENST00000562325 ZNF467Q7Z7K2 595 aaPredicted RBP23.24■■□□□ 1.31
CDH11-203ENST00000562325 NUP133Q8WUM0 1156 aa23.24■■□□□ 1.31
CDH11-203ENST00000562325 SLF1Q9BQI6 1058 aa23.24■■□□□ 1.31
CDH11-203ENST00000562325 CYP2D7A0A087X1C5 515 aa23.23■■□□□ 1.31
CDH11-203ENST00000562325 A0A1W2PQ45 241 aaPredicted RBP23.23■■□□□ 1.31
CDH11-203ENST00000562325 A0A1W2PQY0 241 aa23.23■■□□□ 1.31
CDH11-203ENST00000562325 ADAMTS4O75173 837 aa23.23■■□□□ 1.31
CDH11-203ENST00000562325 PGK2P07205 417 aa23.23■■□□□ 1.31
CDH11-203ENST00000562325 SH3RF1Q7Z6J0 888 aa23.23■■□□□ 1.31
CDH11-203ENST00000562325 NYAP2Q9P242 653 aa23.23■■□□□ 1.31
CDH11-203ENST00000562325 BAZ2AQ9UIF9 1905 aaKnown RBP23.23■■□□□ 1.31
CDH11-203ENST00000562325 ZNFX1Q9P2E3 1918 aaKnown RBP23.22■■□□□ 1.31
CDH11-203ENST00000562325 PGK1P00558 417 aa23.22■■□□□ 1.31
CDH11-203ENST00000562325 FAM83BQ5T0W9 1011 aa23.22■■□□□ 1.31
CDH11-203ENST00000562325 MAFAQ8NHW3 353 aaPredicted RBP23.22■■□□□ 1.31
CDH11-203ENST00000562325 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.22■■□□□ 1.31
CDH11-203ENST00000562325 DNAJC25-GNG10A0A024R161 153 aa23.21■■□□□ 1.31
CDH11-203ENST00000562325 RAG1P15918 1043 aa23.21■■□□□ 1.31
CDH11-203ENST00000562325 CST5P28325 142 aaPredicted RBP23.21■■□□□ 1.31
CDH11-203ENST00000562325 SAMD1Q6SPF0 538 aaPredicted RBP23.21■■□□□ 1.31
CDH11-203ENST00000562325 PRPF38AQ8NAV1 312 aaKnown RBP23.21■■□□□ 1.31
CDH11-203ENST00000562325 LRRCC1Q9C099 1032 aa23.21■■□□□ 1.31
CDH11-203ENST00000562325 ZNF287Q9HBT7 754 aa23.21■■□□□ 1.31
CDH11-203ENST00000562325 FAM184BQ9ULE4 1060 aa23.21■■□□□ 1.31
CDH11-203ENST00000562325 SMCHD1A6NHR9 2005 aa23.21■■□□□ 1.31
CDH11-203ENST00000562325 GREB1LQ9C091 1923 aaPredicted RBP23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms