RNA–Protein interactions for RNA: ENST00000561823.1

MAP1LC3B-202, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 2

Gene MAP1LC3B, Length 456 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-202ENST00000561823 CCDC129Q6ZRS4 1044 aa20.65■□□□□ 0.9
MAP1LC3B-202ENST00000561823 TICAM2Q86XR7 235 aa20.65■□□□□ 0.9
MAP1LC3B-202ENST00000561823 NPLOC4Q8TAT6 608 aa20.65■□□□□ 0.9
MAP1LC3B-202ENST00000561823 MROH8Q9H579 483 aa20.65■□□□□ 0.9
MAP1LC3B-202ENST00000561823 F5H6K3 240 aa20.64■□□□□ 0.89
MAP1LC3B-202ENST00000561823 SLC3A2P08195 630 aaKnown RBP20.64■□□□□ 0.89
MAP1LC3B-202ENST00000561823 ADORA2AP29274 412 aa20.64■□□□□ 0.89
MAP1LC3B-202ENST00000561823 MNX1P50219 401 aaPredicted RBP20.64■□□□□ 0.89
MAP1LC3B-202ENST00000561823 KLRC3Q07444 240 aa20.64■□□□□ 0.89
MAP1LC3B-202ENST00000561823 NECAB2Q7Z6G3 386 aa20.64■□□□□ 0.89
MAP1LC3B-202ENST00000561823 NCAPG2Q86XI2 1143 aa20.64■□□□□ 0.89
MAP1LC3B-202ENST00000561823 DIS3LQ8TF46 1054 aaKnown RBP20.64■□□□□ 0.89
MAP1LC3B-202ENST00000561823 MKL1Q969V6 931 aa20.64■□□□□ 0.89
MAP1LC3B-202ENST00000561823 CEP95Q96GE4 821 aa20.64■□□□□ 0.89
MAP1LC3B-202ENST00000561823 MTMR4Q9NYA4 1195 aa20.64■□□□□ 0.89
MAP1LC3B-202ENST00000561823 CLIP2Q9UDT6 1046 aa20.64■□□□□ 0.89
MAP1LC3B-202ENST00000561823 PPP1R9AQ9ULJ8 1098 aa20.64■□□□□ 0.89
MAP1LC3B-202ENST00000561823 GREB1LQ9C091 1923 aaPredicted RBP20.64■□□□□ 0.89
MAP1LC3B-202ENST00000561823 A0A0G2JMZ2 1700 aa20.64■□□□□ 0.89
MAP1LC3B-202ENST00000561823 VWA5AO00534 786 aa20.63■□□□□ 0.89
MAP1LC3B-202ENST00000561823 IGHA2P01877 340 aa20.63■□□□□ 0.89
MAP1LC3B-202ENST00000561823 HABP4Q5JVS0 413 aaKnown RBP20.63■□□□□ 0.89
MAP1LC3B-202ENST00000561823 LHX8Q68G74 356 aa20.63■□□□□ 0.89
MAP1LC3B-202ENST00000561823 B4GALNT3Q6L9W6 998 aa20.63■□□□□ 0.89
MAP1LC3B-202ENST00000561823 DPP9Q86TI2 863 aa20.63■□□□□ 0.89
MAP1LC3B-202ENST00000561823 ABRAQ8N0Z2 381 aa20.63■□□□□ 0.89
MAP1LC3B-202ENST00000561823 HELLSQ9NRZ9 838 aa20.63■□□□□ 0.89
MAP1LC3B-202ENST00000561823 SYNPO2Q9UMS6 1093 aa20.63■□□□□ 0.89
MAP1LC3B-202ENST00000561823 SLC25A27O95847 323 aa20.62■□□□□ 0.89
MAP1LC3B-202ENST00000561823 NDUFB10O96000 172 aa20.62■□□□□ 0.89
MAP1LC3B-202ENST00000561823 CHD1LQ86WJ1 897 aa20.62■□□□□ 0.89
MAP1LC3B-202ENST00000561823 NEDD1Q8NHV4 660 aa20.62■□□□□ 0.89
MAP1LC3B-202ENST00000561823 NUP88Q99567 741 aaPredicted RBP20.62■□□□□ 0.89
MAP1LC3B-202ENST00000561823 NBPF3Q9H094 633 aa20.62■□□□□ 0.89
MAP1LC3B-202ENST00000561823 NR2E3Q9Y5X4 410 aa20.62■□□□□ 0.89
MAP1LC3B-202ENST00000561823 PLIN4Q96Q06 1357 aa20.61■□□□□ 0.89
MAP1LC3B-202ENST00000561823 COBLO75128 1261 aa20.61■□□□□ 0.89
MAP1LC3B-202ENST00000561823 TTLL1O95922 423 aa20.61■□□□□ 0.89
MAP1LC3B-202ENST00000561823 TSPY3P0CV98 308 aa20.61■□□□□ 0.89
MAP1LC3B-202ENST00000561823 TSPY8P0CW00 308 aa20.61■□□□□ 0.89
MAP1LC3B-202ENST00000561823 CYP2C19P33261 490 aa20.61■□□□□ 0.89
MAP1LC3B-202ENST00000561823 NUCB1Q02818 461 aa20.61■□□□□ 0.89
MAP1LC3B-202ENST00000561823 FAM47AQ5JRC9 791 aa20.61■□□□□ 0.89
MAP1LC3B-202ENST00000561823 VPS53Q5VIR6 699 aa20.61■□□□□ 0.89
MAP1LC3B-202ENST00000561823 OLFML2BQ68BL8 750 aa20.61■□□□□ 0.89
MAP1LC3B-202ENST00000561823 RIOX2Q8IUF8 465 aa20.61■□□□□ 0.89
MAP1LC3B-202ENST00000561823 REPS2Q8NFH8 660 aa20.61■□□□□ 0.89
MAP1LC3B-202ENST00000561823 SLF1Q9BQI6 1058 aa20.61■□□□□ 0.89
MAP1LC3B-202ENST00000561823 COLQQ9Y215 455 aaPredicted RBP20.61■□□□□ 0.89
MAP1LC3B-202ENST00000561823 EVI5O60447 810 aa20.6■□□□□ 0.89
MAP1LC3B-202ENST00000561823 FCER1AP12319 257 aa20.6■□□□□ 0.89
MAP1LC3B-202ENST00000561823 STAT3P40763 770 aa20.6■□□□□ 0.89
MAP1LC3B-202ENST00000561823 TFAP4Q01664 338 aa20.6■□□□□ 0.89
MAP1LC3B-202ENST00000561823 ALX1Q15699 326 aa20.6■□□□□ 0.89
MAP1LC3B-202ENST00000561823 MCMDC2Q4G0Z9 681 aa20.6■□□□□ 0.89
MAP1LC3B-202ENST00000561823 FAM227BQ96M60 508 aa20.6■□□□□ 0.89
MAP1LC3B-202ENST00000561823 SLC5A4Q9NY91 659 aa20.6■□□□□ 0.89
MAP1LC3B-202ENST00000561823 ANAPC4Q9UJX5 808 aa20.6■□□□□ 0.89
MAP1LC3B-202ENST00000561823 ZNF214Q9UL59 606 aaPredicted RBP20.6■□□□□ 0.89
MAP1LC3B-202ENST00000561823 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.6■□□□□ 0.89
MAP1LC3B-202ENST00000561823 A0A0D9SFI3 127 aa20.59■□□□□ 0.89
MAP1LC3B-202ENST00000561823 TRIM6-TRIM34B2RNG4 842 aa20.59■□□□□ 0.89
MAP1LC3B-202ENST00000561823 PLEKHM2Q8IWE5 1019 aa20.59■□□□□ 0.89
MAP1LC3B-202ENST00000561823 PRPF38AQ8NAV1 312 aaKnown RBP20.59■□□□□ 0.89
MAP1LC3B-202ENST00000561823 GMCL1P1Q8NEA9 526 aa20.59■□□□□ 0.89
MAP1LC3B-202ENST00000561823 OSBPL3Q9H4L5 887 aa20.59■□□□□ 0.89
MAP1LC3B-202ENST00000561823 C11orf49Q9H6J7 331 aa20.59■□□□□ 0.89
MAP1LC3B-202ENST00000561823 SUPT16HQ9Y5B9 1047 aaKnown RBP20.59■□□□□ 0.89
MAP1LC3B-202ENST00000561823 ZNF236Q9UL36 1845 aa20.58■□□□□ 0.89
MAP1LC3B-202ENST00000561823 CTDSPL2Q05D32 466 aa20.58■□□□□ 0.89
MAP1LC3B-202ENST00000561823 LRRC47Q8N1G4 583 aaKnown RBP20.58■□□□□ 0.89
MAP1LC3B-202ENST00000561823 TRPV1Q8NER1 839 aa20.58■□□□□ 0.89
MAP1LC3B-202ENST00000561823 INCENPQ9NQS7 918 aa20.58■□□□□ 0.89
MAP1LC3B-202ENST00000561823 PARP14Q460N5 1801 aa20.57■□□□□ 0.88
MAP1LC3B-202ENST00000561823 MSCO60682 206 aa20.57■□□□□ 0.88
MAP1LC3B-202ENST00000561823 FGAP02671 866 aa20.57■□□□□ 0.88
MAP1LC3B-202ENST00000561823 CYBAP13498 195 aa20.57■□□□□ 0.88
MAP1LC3B-202ENST00000561823 COPB2P35606 906 aa20.57■□□□□ 0.88
MAP1LC3B-202ENST00000561823 NMIQ13287 307 aaPredicted RBP20.57■□□□□ 0.88
MAP1LC3B-202ENST00000561823 RILPL2Q969X0 211 aa20.57■□□□□ 0.88
MAP1LC3B-202ENST00000561823 MMP19Q99542 508 aa20.57■□□□□ 0.88
MAP1LC3B-202ENST00000561823 DDX20Q9UHI6 824 aaKnown RBP20.57■□□□□ 0.88
MAP1LC3B-202ENST00000561823 FGRP09769 529 aa20.56■□□□□ 0.88
MAP1LC3B-202ENST00000561823 COL6A1P12109 1028 aa20.56■□□□□ 0.88
MAP1LC3B-202ENST00000561823 CNGA1P29973 690 aa20.56■□□□□ 0.88
MAP1LC3B-202ENST00000561823 PPP4R3BQ5MIZ7 849 aa20.56■□□□□ 0.88
MAP1LC3B-202ENST00000561823 SLFN13Q68D06 897 aa20.56■□□□□ 0.88
MAP1LC3B-202ENST00000561823 CHRDL2Q6WN34 429 aa20.56■□□□□ 0.88
MAP1LC3B-202ENST00000561823 ZNF589Q86UQ0 364 aaPredicted RBP20.56■□□□□ 0.88
MAP1LC3B-202ENST00000561823 MAML3Q96JK9 1138 aa20.56■□□□□ 0.88
MAP1LC3B-202ENST00000561823 TEX13BQ9BXU2 312 aa20.56■□□□□ 0.88
MAP1LC3B-202ENST00000561823 FEM1BQ9UK73 627 aa20.56■□□□□ 0.88
MAP1LC3B-202ENST00000561823 TACC3Q9Y6A5 838 aa20.56■□□□□ 0.88
MAP1LC3B-202ENST00000561823 TSPY2A6NKD2 308 aa20.55■□□□□ 0.88
MAP1LC3B-202ENST00000561823 ATP2A1O14983 1001 aa20.55■□□□□ 0.88
MAP1LC3B-202ENST00000561823 HSPD1P10809 573 aaKnown RBP20.55■□□□□ 0.88
MAP1LC3B-202ENST00000561823 KCTD2Q14681 263 aa20.55■□□□□ 0.88
MAP1LC3B-202ENST00000561823 IL17RBQ9NRM6 502 aa20.55■□□□□ 0.88
MAP1LC3B-202ENST00000561823 PFASO15067 1338 aa20.54■□□□□ 0.88
MAP1LC3B-202ENST00000561823 ORC4O43929 436 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms