RNA–Protein interactions for RNA: ENST00000561354.1

CARMIL3-204, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 4

Gene CARMIL3, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-204ENST00000561354 KANSL2Q9H9L4 492 aa14.25□□□□□ -0.13
CARMIL3-204ENST00000561354 DIS3Q9Y2L1 958 aaKnown RBP14.25□□□□□ -0.13
CARMIL3-204ENST00000561354 MYH8P13535 1937 aa14.25□□□□□ -0.13
CARMIL3-204ENST00000561354 LTBP2Q14767 1821 aa14.25□□□□□ -0.13
CARMIL3-204ENST00000561354 ZBED9Q6R2W3 1325 aa14.24□□□□□ -0.13
CARMIL3-204ENST00000561354 EEF2P13639 858 aaKnown RBP14.24□□□□□ -0.13
CARMIL3-204ENST00000561354 ADCYAP1R1P41586 468 aa14.24□□□□□ -0.13
CARMIL3-204ENST00000561354 TRIM60Q495X7 471 aa14.24□□□□□ -0.13
CARMIL3-204ENST00000561354 SLFNL1Q499Z3 407 aa14.24□□□□□ -0.13
CARMIL3-204ENST00000561354 RIOX2Q8IUF8 465 aa14.24□□□□□ -0.13
CARMIL3-204ENST00000561354 PARP14Q460N5 1801 aa14.24□□□□□ -0.13
CARMIL3-204ENST00000561354 CYP2D7A0A087X1C5 515 aa14.23□□□□□ -0.13
CARMIL3-204ENST00000561354 SMIM22K7EJ46 135 aa14.23□□□□□ -0.13
CARMIL3-204ENST00000561354 COPB2P35606 906 aa14.23□□□□□ -0.13
CARMIL3-204ENST00000561354 SHHQ15465 462 aa14.23□□□□□ -0.13
CARMIL3-204ENST00000561354 FAM47AQ5JRC9 791 aa14.23□□□□□ -0.13
CARMIL3-204ENST00000561354 ZNF697Q5TEC3 545 aa14.23□□□□□ -0.13
CARMIL3-204ENST00000561354 MMP19Q99542 508 aa14.23□□□□□ -0.13
CARMIL3-204ENST00000561354 TINF2Q9BSI4 451 aa14.23□□□□□ -0.13
CARMIL3-204ENST00000561354 CHMP4BQ9H444 224 aaKnown RBP14.23□□□□□ -0.13
CARMIL3-204ENST00000561354 GOPCQ9HD26 462 aa14.23□□□□□ -0.13
CARMIL3-204ENST00000561354 PHF24Q9UPV7 400 aa14.23□□□□□ -0.13
CARMIL3-204ENST00000561354 BAZ2AQ9UIF9 1905 aaKnown RBP14.23□□□□□ -0.13
CARMIL3-204ENST00000561354 ZNFX1Q9P2E3 1918 aaKnown RBP14.22□□□□□ -0.13
CARMIL3-204ENST00000561354 VWA5AO00534 786 aa14.22□□□□□ -0.13
CARMIL3-204ENST00000561354 MYCNP04198 464 aaPredicted RBP14.22□□□□□ -0.13
CARMIL3-204ENST00000561354 RARBP10826 455 aa14.22□□□□□ -0.13
CARMIL3-204ENST00000561354 STAT3P40763 770 aa14.22□□□□□ -0.13
CARMIL3-204ENST00000561354 KCTD2Q14681 263 aa14.22□□□□□ -0.13
CARMIL3-204ENST00000561354 ZNF792Q3KQV3 632 aa14.22□□□□□ -0.13
CARMIL3-204ENST00000561354 ZSCAN25Q6NSZ9 544 aa14.22□□□□□ -0.13
CARMIL3-204ENST00000561354 CTR9Q6PD62 1173 aa14.22□□□□□ -0.13
CARMIL3-204ENST00000561354 BADQ92934 168 aa14.22□□□□□ -0.13
CARMIL3-204ENST00000561354 FERMT2Q96AC1 680 aa14.22□□□□□ -0.13
CARMIL3-204ENST00000561354 XPNPEP3Q9NQH7 507 aa14.22□□□□□ -0.13
CARMIL3-204ENST00000561354 PRDM5Q9NQX1 630 aaPredicted RBP14.22□□□□□ -0.13
CARMIL3-204ENST00000561354 PDLIM7Q9NR12 457 aa14.22□□□□□ -0.13
CARMIL3-204ENST00000561354 FBXO28Q9NVF7 368 aa14.22□□□□□ -0.13
CARMIL3-204ENST00000561354 ZNF214Q9UL59 606 aaPredicted RBP14.22□□□□□ -0.13
CARMIL3-204ENST00000561354 PPP1R9AQ9ULJ8 1098 aa14.22□□□□□ -0.13
CARMIL3-204ENST00000561354 COG6Q9Y2V7 657 aa14.22□□□□□ -0.13
CARMIL3-204ENST00000561354 SLC4A4Q9Y6R1 1079 aa14.22□□□□□ -0.13
CARMIL3-204ENST00000561354 ROBO3Q96MS0 1386 aa14.22□□□□□ -0.13
CARMIL3-204ENST00000561354 CHGBP05060 677 aa14.21□□□□□ -0.13
CARMIL3-204ENST00000561354 C9orf50Q5SZB4 431 aa14.21□□□□□ -0.13
CARMIL3-204ENST00000561354 SAMD1Q6SPF0 538 aaPredicted RBP14.21□□□□□ -0.13
CARMIL3-204ENST00000561354 RNF180Q86T96 592 aa14.21□□□□□ -0.13
CARMIL3-204ENST00000561354 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.21□□□□□ -0.13
CARMIL3-204ENST00000561354 REPS2Q8NFH8 660 aa14.21□□□□□ -0.13
CARMIL3-204ENST00000561354 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.21□□□□□ -0.13
CARMIL3-204ENST00000561354 BCL11AQ9H165 835 aa14.21□□□□□ -0.13
CARMIL3-204ENST00000561354 ARPP21Q9UBL0 812 aaPredicted RBP14.21□□□□□ -0.13
CARMIL3-204ENST00000561354 TACC3Q9Y6A5 838 aa14.21□□□□□ -0.13
CARMIL3-204ENST00000561354 SMCHD1A6NHR9 2005 aa14.2□□□□□ -0.14
CARMIL3-204ENST00000561354 COL11A1P12107 1806 aaPredicted RBP14.2□□□□□ -0.14
CARMIL3-204ENST00000561354 TRIM43BA6NCK2 446 aa14.2□□□□□ -0.14
CARMIL3-204ENST00000561354 PGK2P07205 417 aa14.2□□□□□ -0.14
CARMIL3-204ENST00000561354 ZNF865P0CJ78 1059 aaPredicted RBP14.2□□□□□ -0.14
CARMIL3-204ENST00000561354 SMAD3P84022 425 aaKnown RBP14.2□□□□□ -0.14
CARMIL3-204ENST00000561354 TLE2Q04725 743 aa14.2□□□□□ -0.14
CARMIL3-204ENST00000561354 FAM83BQ5T0W9 1011 aa14.2□□□□□ -0.14
CARMIL3-204ENST00000561354 SH3RF1Q7Z6J0 888 aa14.2□□□□□ -0.14
CARMIL3-204ENST00000561354 MSL3Q8N5Y2 521 aaKnown RBP14.2□□□□□ -0.14
CARMIL3-204ENST00000561354 TRIM43Q96BQ3 446 aaPredicted RBP14.2□□□□□ -0.14
CARMIL3-204ENST00000561354 FAM161BQ96MY7 647 aa14.2□□□□□ -0.14
CARMIL3-204ENST00000561354 PUS7LQ9H0K6 701 aaKnown RBP14.2□□□□□ -0.14
CARMIL3-204ENST00000561354 PGK1P00558 417 aa14.19□□□□□ -0.14
CARMIL3-204ENST00000561354 AKR1A1P14550 325 aa14.19□□□□□ -0.14
CARMIL3-204ENST00000561354 SBK1Q52WX2 424 aa14.19□□□□□ -0.14
CARMIL3-204ENST00000561354 GIMAP6Q6P9H5 292 aa14.19□□□□□ -0.14
CARMIL3-204ENST00000561354 COL25A1Q9BXS0 654 aaPredicted RBP14.19□□□□□ -0.14
CARMIL3-204ENST00000561354 SEMA6BQ9H3T3 888 aa14.19□□□□□ -0.14
CARMIL3-204ENST00000561354 CNPY2Q9Y2B0 182 aa14.19□□□□□ -0.14
CARMIL3-204ENST00000561354 MYH7P12883 1935 aa14.19□□□□□ -0.14
CARMIL3-204ENST00000561354 GREB1LQ9C091 1923 aaPredicted RBP14.18□□□□□ -0.14
CARMIL3-204ENST00000561354 KIAA0355O15063 1070 aa14.18□□□□□ -0.14
CARMIL3-204ENST00000561354 ADAMTS4O75173 837 aa14.18□□□□□ -0.14
CARMIL3-204ENST00000561354 CLTBP09497 229 aa14.18□□□□□ -0.14
CARMIL3-204ENST00000561354 TAL1P17542 331 aaPredicted RBP14.18□□□□□ -0.14
CARMIL3-204ENST00000561354 STRBPQ96SI9 672 aaKnown RBP14.18□□□□□ -0.14
CARMIL3-204ENST00000561354 CDX2Q99626 313 aaPredicted RBP14.18□□□□□ -0.14
CARMIL3-204ENST00000561354 SLF1Q9BQI6 1058 aa14.18□□□□□ -0.14
CARMIL3-204ENST00000561354 TSEN34Q9BSV6 310 aaKnown RBP14.18□□□□□ -0.14
CARMIL3-204ENST00000561354 TEX13BQ9BXU2 312 aa14.18□□□□□ -0.14
CARMIL3-204ENST00000561354 LRRCC1Q9C099 1032 aa14.18□□□□□ -0.14
CARMIL3-204ENST00000561354 NYAP2Q9P242 653 aa14.18□□□□□ -0.14
CARMIL3-204ENST00000561354 PLXNA1Q9UIW2 1896 aa14.18□□□□□ -0.14
CARMIL3-204ENST00000561354 DNAJC25-GNG10A0A024R161 153 aa14.17□□□□□ -0.14
CARMIL3-204ENST00000561354 A0A1W2PQ45 241 aaPredicted RBP14.17□□□□□ -0.14
CARMIL3-204ENST00000561354 A0A1W2PQY0 241 aa14.17□□□□□ -0.14
CARMIL3-204ENST00000561354 F5H6K3 240 aa14.17□□□□□ -0.14
CARMIL3-204ENST00000561354 ATP2A1O14983 1001 aa14.17□□□□□ -0.14
CARMIL3-204ENST00000561354 RAD21O60216 631 aa14.17□□□□□ -0.14
CARMIL3-204ENST00000561354 RASA1P20936 1047 aa14.17□□□□□ -0.14
CARMIL3-204ENST00000561354 ITGB8P26012 769 aa14.17□□□□□ -0.14
CARMIL3-204ENST00000561354 KLRC3Q07444 240 aa14.17□□□□□ -0.14
CARMIL3-204ENST00000561354 MAMDC4Q6UXC1 1216 aa14.17□□□□□ -0.14
CARMIL3-204ENST00000561354 ANKRD33Q7Z3H0 272 aa14.17□□□□□ -0.14
CARMIL3-204ENST00000561354 PRPF38AQ8NAV1 312 aaKnown RBP14.17□□□□□ -0.14
CARMIL3-204ENST00000561354 TOX2Q96NM4 488 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms