RNA–Protein interactions for RNA: ENST00000560983.1

HERC1-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-211ENST00000560983 COL19A1Q14993 1142 aa5.62□□□□□ -1.51
HERC1-211ENST00000560983 ARHGEF25Q86VW2 580 aa5.62□□□□□ -1.51
HERC1-211ENST00000560983 AMIGO3Q86WK7 504 aa5.62□□□□□ -1.51
HERC1-211ENST00000560983 CCDC74AQ96AQ1 378 aa5.62□□□□□ -1.51
HERC1-211ENST00000560983 EHD4Q9H223 541 aa5.62□□□□□ -1.51
HERC1-211ENST00000560983 TRAK1Q9UPV9 953 aa5.62□□□□□ -1.51
HERC1-211ENST00000560983 PCDHGC5Q9Y5F6 944 aa5.62□□□□□ -1.51
HERC1-211ENST00000560983 KDM2BQ8NHM5 1336 aa5.62□□□□□ -1.51
HERC1-211ENST00000560983 EIF3AQ14152 1382 aaKnown RBP5.62□□□□□ -1.51
HERC1-211ENST00000560983 SPATA31E1Q6ZUB1 1445 aa5.62□□□□□ -1.51
HERC1-211ENST00000560983 TMEM238LA0A1B0GVL6 79 aa5.61□□□□□ -1.51
HERC1-211ENST00000560983 EIF1AYO14602 144 aaKnown RBP5.61□□□□□ -1.51
HERC1-211ENST00000560983 TNRC18O15417 2968 aaPredicted RBP5.61□□□□□ -1.51
HERC1-211ENST00000560983 NFICP08651 508 aa5.61□□□□□ -1.51
HERC1-211ENST00000560983 KCPQ6ZWJ8 1503 aa5.61□□□□□ -1.51
HERC1-211ENST00000560983 KNDC1Q76NI1 1749 aa5.61□□□□□ -1.51
HERC1-211ENST00000560983 WFDC3Q8IUB2 231 aa5.61□□□□□ -1.51
HERC1-211ENST00000560983 TOPAZ1Q8N9V7 1692 aa5.61□□□□□ -1.51
HERC1-211ENST00000560983 DDX54Q8TDD1 881 aaKnown RBP5.61□□□□□ -1.51
HERC1-211ENST00000560983 CICQ96RK0 1608 aaPredicted RBP5.61□□□□□ -1.51
HERC1-211ENST00000560983 CORO1BQ9BR76 489 aa5.61□□□□□ -1.51
HERC1-211ENST00000560983 BSDC1Q9NW68 430 aaPredicted RBP5.61□□□□□ -1.51
HERC1-211ENST00000560983 IFT172Q9UG01 1749 aa5.6□□□□□ -1.51
HERC1-211ENST00000560983 PXDNLA1KZ92 1463 aa5.6□□□□□ -1.51
HERC1-211ENST00000560983 A0A0G2JLW4 131 aa5.6□□□□□ -1.51
HERC1-211ENST00000560983 TMPRSS2O15393 492 aa5.6□□□□□ -1.51
HERC1-211ENST00000560983 CYP26A1O43174 497 aa5.6□□□□□ -1.51
HERC1-211ENST00000560983 HSPA8P11142 646 aaKnown RBP5.6□□□□□ -1.51
HERC1-211ENST00000560983 ITGAEP38570 1179 aa5.6□□□□□ -1.51
HERC1-211ENST00000560983 CYP27A1Q02318 531 aa5.6□□□□□ -1.51
HERC1-211ENST00000560983 GRM2Q14416 872 aa5.6□□□□□ -1.51
HERC1-211ENST00000560983 AKAP4Q5JQC9 854 aa5.6□□□□□ -1.51
HERC1-211ENST00000560983 DMRTB1Q96MA1 342 aa5.6□□□□□ -1.51
HERC1-211ENST00000560983 FBXL18Q96ME1 805 aa5.6□□□□□ -1.51
HERC1-211ENST00000560983 CDK19Q9BWU1 502 aa5.6□□□□□ -1.51
HERC1-211ENST00000560983 CCNL1Q9UK58 526 aaPredicted RBP5.6□□□□□ -1.51
HERC1-211ENST00000560983 PPP1R9AQ9ULJ8 1098 aa5.6□□□□□ -1.51
HERC1-211ENST00000560983 PPLO60437 1756 aa5.6□□□□□ -1.51
HERC1-211ENST00000560983 NSD2O96028 1365 aa5.59□□□□□ -1.51
HERC1-211ENST00000560983 CCDC7Q96M83 1385 aa5.59□□□□□ -1.51
HERC1-211ENST00000560983 DYNC1LI2O43237 492 aaPredicted RBP5.59□□□□□ -1.51
HERC1-211ENST00000560983 VEGFAP15692 232 aaPredicted RBP5.59□□□□□ -1.51
HERC1-211ENST00000560983 ITGB5P18084 799 aa5.59□□□□□ -1.51
HERC1-211ENST00000560983 RAB6AP20340 208 aa5.59□□□□□ -1.51
HERC1-211ENST00000560983 KCNA3P22001 575 aa5.59□□□□□ -1.51
HERC1-211ENST00000560983 ASPAP45381 313 aa5.59□□□□□ -1.51
HERC1-211ENST00000560983 TGFB2P61812 414 aa5.59□□□□□ -1.51
HERC1-211ENST00000560983 KIF4BQ2VIQ3 1234 aa5.59□□□□□ -1.51
HERC1-211ENST00000560983 OGFOD3Q6PK18 319 aa5.59□□□□□ -1.51
HERC1-211ENST00000560983 ZNF765Q7L2R6 523 aa5.59□□□□□ -1.51
HERC1-211ENST00000560983 DYMQ7RTS9 669 aa5.59□□□□□ -1.51
HERC1-211ENST00000560983 FLAD1Q8NFF5 587 aa5.59□□□□□ -1.51
HERC1-211ENST00000560983 CSRNP1Q96S65 589 aa5.59□□□□□ -1.51
HERC1-211ENST00000560983 NIF3L1Q9GZT8 377 aa5.59□□□□□ -1.51
HERC1-211ENST00000560983 KRT82Q9NSB4 513 aa5.59□□□□□ -1.51
HERC1-211ENST00000560983 CRIM1Q9NZV1 1036 aa5.59□□□□□ -1.51
HERC1-211ENST00000560983 ZC3H7BQ9UGR2 993 aaKnown RBP5.59□□□□□ -1.51
HERC1-211ENST00000560983 ANGEL1Q9UNK9 670 aaKnown RBP5.59□□□□□ -1.51
HERC1-211ENST00000560983 RNF114Q9Y508 228 aa5.59□□□□□ -1.51
HERC1-211ENST00000560983 PPIP5K1Q6PFW1 1433 aa5.58□□□□□ -1.52
HERC1-211ENST00000560983 CNTNAP1P78357 1384 aa5.58□□□□□ -1.52
HERC1-211ENST00000560983 PLEKHG2Q9H7P9 1386 aa5.58□□□□□ -1.52
HERC1-211ENST00000560983 KIF1BO60333 1816 aa5.58□□□□□ -1.52
HERC1-211ENST00000560983 ZNF862O60290 1169 aa5.58□□□□□ -1.52
HERC1-211ENST00000560983 IL2RBP14784 551 aa5.58□□□□□ -1.52
HERC1-211ENST00000560983 DPEP1P16444 411 aa5.58□□□□□ -1.52
HERC1-211ENST00000560983 PDZD3Q86UT5 571 aa5.58□□□□□ -1.52
HERC1-211ENST00000560983 RETREG2Q8NC44 543 aa5.58□□□□□ -1.52
HERC1-211ENST00000560983 WDR89Q96FK6 387 aaPredicted RBP5.58□□□□□ -1.52
HERC1-211ENST00000560983 CCDC86Q9H6F5 360 aaKnown RBP5.58□□□□□ -1.52
HERC1-211ENST00000560983 PAK6Q9NQU5 681 aaPredicted RBP5.58□□□□□ -1.52
HERC1-211ENST00000560983 RAD18Q9NS91 495 aa5.58□□□□□ -1.52
HERC1-211ENST00000560983 RNF181Q9P0P0 153 aa5.58□□□□□ -1.52
HERC1-211ENST00000560983 AP4E1Q9UPM8 1137 aa5.58□□□□□ -1.52
HERC1-211ENST00000560983 NHSQ6T4R5 1651 aa5.58□□□□□ -1.52
HERC1-211ENST00000560983 QSER1Q2KHR3 1735 aa5.57□□□□□ -1.52
HERC1-211ENST00000560983 LOC105371045A0A1W2PR82 267 aa5.57□□□□□ -1.52
HERC1-211ENST00000560983 GLTPD2A6NH11 291 aa5.57□□□□□ -1.52
HERC1-211ENST00000560983 SOWAHDA6NJG2 315 aa5.57□□□□□ -1.52
HERC1-211ENST00000560983 DSC3Q14574 896 aa5.57□□□□□ -1.52
HERC1-211ENST00000560983 DUSP27Q5VZP5 1158 aa5.57□□□□□ -1.52
HERC1-211ENST00000560983 SYTL4Q96C24 671 aaPredicted RBP5.57□□□□□ -1.52
HERC1-211ENST00000560983 FANCD2OSQ96PS1 177 aa5.57□□□□□ -1.52
HERC1-211ENST00000560983 CACNA2D2Q9NY47 1150 aa5.57□□□□□ -1.52
HERC1-211ENST00000560983 GNEQ9Y223 722 aaKnown RBP5.57□□□□□ -1.52
HERC1-211ENST00000560983 KIAA1210Q9ULL0 1709 aa5.57□□□□□ -1.52
HERC1-211ENST00000560983 ANKRD36BQ8N2N9 1353 aa5.56□□□□□ -1.52
HERC1-211ENST00000560983 KRTAP4-8A0A0G2JLE6 195 aa5.56□□□□□ -1.52
HERC1-211ENST00000560983 BTBD11A6QL63 1104 aa5.56□□□□□ -1.52
HERC1-211ENST00000560983 GSTP1P09211 210 aaKnown RBP5.56□□□□□ -1.52
HERC1-211ENST00000560983 LIG1P18858 919 aa5.56□□□□□ -1.52
HERC1-211ENST00000560983 PDE3AQ14432 1141 aa5.56□□□□□ -1.52
HERC1-211ENST00000560983 EPS8L3Q8TE67 593 aaKnown RBP5.56□□□□□ -1.52
HERC1-211ENST00000560983 COL18A1P39060 1754 aa5.55□□□□□ -1.52
HERC1-211ENST00000560983 SLIT3O75094 1523 aa5.55□□□□□ -1.52
HERC1-211ENST00000560983 ABCC6O95255 1503 aa5.55□□□□□ -1.52
HERC1-211ENST00000560983 XRCC5P13010 732 aaKnown RBP5.55□□□□□ -1.52
HERC1-211ENST00000560983 TMC7Q7Z402 723 aa5.55□□□□□ -1.52
HERC1-211ENST00000560983 AGBL5Q8NDL9 886 aa5.55□□□□□ -1.52
HERC1-211ENST00000560983 CCER1Q8TC90 406 aaPredicted RBP5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms