RNA–Protein interactions for RNA: ENST00000560564.1

SPG21-211, Transcript of SPG21, maspardin, humanhuman

TSL 4

Gene SPG21, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG21-211ENST00000560564 FAM83BQ5T0W9 1011 aa19.31■□□□□ 0.68
SPG21-211ENST00000560564 VPS53Q5VIR6 699 aa19.31■□□□□ 0.68
SPG21-211ENST00000560564 WDR78Q5VTH9 848 aa19.31■□□□□ 0.68
SPG21-211ENST00000560564 TICAM2Q86XR7 235 aa19.31■□□□□ 0.68
SPG21-211ENST00000560564 ANKLE1Q8NAG6 615 aa19.31■□□□□ 0.68
SPG21-211ENST00000560564 REPS2Q8NFH8 660 aa19.31■□□□□ 0.68
SPG21-211ENST00000560564 NPLOC4Q8TAT6 608 aa19.31■□□□□ 0.68
SPG21-211ENST00000560564 DIS3LQ8TF46 1054 aaKnown RBP19.31■□□□□ 0.68
SPG21-211ENST00000560564 MKL1Q969V6 931 aa19.31■□□□□ 0.68
SPG21-211ENST00000560564 CWC22Q9HCG8 908 aaKnown RBP19.31■□□□□ 0.68
SPG21-211ENST00000560564 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.31■□□□□ 0.68
SPG21-211ENST00000560564 DNAH12Q6ZR08 3092 aa19.31■□□□□ 0.68
SPG21-211ENST00000560564 A0A0D9SFI3 127 aa19.3■□□□□ 0.68
SPG21-211ENST00000560564 H0YGN5 161 aa19.3■□□□□ 0.68
SPG21-211ENST00000560564 CCND3P30281 292 aaPredicted RBP19.3■□□□□ 0.68
SPG21-211ENST00000560564 NUCB1Q02818 461 aa19.3■□□□□ 0.68
SPG21-211ENST00000560564 B4GALNT3Q6L9W6 998 aa19.3■□□□□ 0.68
SPG21-211ENST00000560564 NEDD1Q8NHV4 660 aa19.3■□□□□ 0.68
SPG21-211ENST00000560564 CEP95Q96GE4 821 aa19.3■□□□□ 0.68
SPG21-211ENST00000560564 HTATIP2Q9BUP3 242 aa19.3■□□□□ 0.68
SPG21-211ENST00000560564 OSBPL3Q9H4L5 887 aa19.3■□□□□ 0.68
SPG21-211ENST00000560564 ZNF287Q9HBT7 754 aa19.3■□□□□ 0.68
SPG21-211ENST00000560564 HELLSQ9NRZ9 838 aa19.3■□□□□ 0.68
SPG21-211ENST00000560564 MTMR4Q9NYA4 1195 aa19.3■□□□□ 0.68
SPG21-211ENST00000560564 PPP1R9AQ9ULJ8 1098 aa19.3■□□□□ 0.68
SPG21-211ENST00000560564 IVNS1ABPQ9Y6Y0 642 aa19.3■□□□□ 0.68
SPG21-211ENST00000560564 PLXNA1Q9UIW2 1896 aa19.3■□□□□ 0.68
SPG21-211ENST00000560564 F5H6K3 240 aa19.29■□□□□ 0.68
SPG21-211ENST00000560564 STRNO43815 780 aa19.29■□□□□ 0.68
SPG21-211ENST00000560564 NDUFB10O96000 172 aa19.29■□□□□ 0.68
SPG21-211ENST00000560564 ADORA2AP29274 412 aa19.29■□□□□ 0.68
SPG21-211ENST00000560564 KLRC3Q07444 240 aa19.29■□□□□ 0.68
SPG21-211ENST00000560564 LHX8Q68G74 356 aa19.29■□□□□ 0.68
SPG21-211ENST00000560564 CHD1LQ86WJ1 897 aa19.29■□□□□ 0.68
SPG21-211ENST00000560564 PLEKHM2Q8IWE5 1019 aa19.29■□□□□ 0.68
SPG21-211ENST00000560564 ZNF444Q8N0Y2 327 aaPredicted RBP19.29■□□□□ 0.68
SPG21-211ENST00000560564 PAWRQ96IZ0 340 aaKnown RBP19.29■□□□□ 0.68
SPG21-211ENST00000560564 FAM227BQ96M60 508 aa19.29■□□□□ 0.68
SPG21-211ENST00000560564 NUP88Q99567 741 aaPredicted RBP19.29■□□□□ 0.68
SPG21-211ENST00000560564 MROH8Q9H579 483 aa19.29■□□□□ 0.68
SPG21-211ENST00000560564 ZNF214Q9UL59 606 aaPredicted RBP19.29■□□□□ 0.68
SPG21-211ENST00000560564 TACC3Q9Y6A5 838 aa19.29■□□□□ 0.68
SPG21-211ENST00000560564 VWA5AO00534 786 aa19.28■□□□□ 0.68
SPG21-211ENST00000560564 ABRAQ8N0Z2 381 aa19.28■□□□□ 0.68
SPG21-211ENST00000560564 CLIP2Q9UDT6 1046 aa19.28■□□□□ 0.68
SPG21-211ENST00000560564 ANAPC4Q9UJX5 808 aa19.28■□□□□ 0.68
SPG21-211ENST00000560564 SYNPO2Q9UMS6 1093 aa19.28■□□□□ 0.68
SPG21-211ENST00000560564 SMCHD1A6NHR9 2005 aa19.27■□□□□ 0.68
SPG21-211ENST00000560564 COBLO75128 1261 aa19.27■□□□□ 0.68
SPG21-211ENST00000560564 PDE4BQ07343 736 aa19.27■□□□□ 0.68
SPG21-211ENST00000560564 PLS1Q14651 629 aa19.27■□□□□ 0.68
SPG21-211ENST00000560564 ALX1Q15699 326 aa19.27■□□□□ 0.68
SPG21-211ENST00000560564 FAM47AQ5JRC9 791 aa19.27■□□□□ 0.68
SPG21-211ENST00000560564 RIOX2Q8IUF8 465 aa19.27■□□□□ 0.68
SPG21-211ENST00000560564 DPF3Q92784 378 aa19.27■□□□□ 0.68
SPG21-211ENST00000560564 SUPT16HQ9Y5B9 1047 aaKnown RBP19.27■□□□□ 0.68
SPG21-211ENST00000560564 TTLL1O95922 423 aa19.26■□□□□ 0.67
SPG21-211ENST00000560564 FGRP09769 529 aa19.26■□□□□ 0.67
SPG21-211ENST00000560564 NMIQ13287 307 aaPredicted RBP19.26■□□□□ 0.67
SPG21-211ENST00000560564 MFSD14CQ5VZR4 134 aa19.26■□□□□ 0.67
SPG21-211ENST00000560564 OLFML2BQ68BL8 750 aa19.26■□□□□ 0.67
SPG21-211ENST00000560564 NECAB2Q7Z6G3 386 aa19.26■□□□□ 0.67
SPG21-211ENST00000560564 ZNF589Q86UQ0 364 aaPredicted RBP19.26■□□□□ 0.67
SPG21-211ENST00000560564 NCAPG2Q86XI2 1143 aa19.26■□□□□ 0.67
SPG21-211ENST00000560564 TRPV1Q8NER1 839 aa19.26■□□□□ 0.67
SPG21-211ENST00000560564 SLF1Q9BQI6 1058 aa19.26■□□□□ 0.67
SPG21-211ENST00000560564 INCENPQ9NQS7 918 aa19.26■□□□□ 0.67
SPG21-211ENST00000560564 ZMYM6O95789 1325 aa19.25■□□□□ 0.67
SPG21-211ENST00000560564 RAD21O60216 631 aa19.25■□□□□ 0.67
SPG21-211ENST00000560564 SLC25A27O95847 323 aa19.25■□□□□ 0.67
SPG21-211ENST00000560564 SLC3A2P08195 630 aaKnown RBP19.25■□□□□ 0.67
SPG21-211ENST00000560564 TSPY3P0CV98 308 aa19.25■□□□□ 0.67
SPG21-211ENST00000560564 TSPY8P0CW00 308 aa19.25■□□□□ 0.67
SPG21-211ENST00000560564 CYBAP13498 195 aa19.25■□□□□ 0.67
SPG21-211ENST00000560564 CYP2C19P33261 490 aa19.25■□□□□ 0.67
SPG21-211ENST00000560564 TFAP4Q01664 338 aa19.25■□□□□ 0.67
SPG21-211ENST00000560564 CTDSPL2Q05D32 466 aa19.25■□□□□ 0.67
SPG21-211ENST00000560564 MCMDC2Q4G0Z9 681 aa19.25■□□□□ 0.67
SPG21-211ENST00000560564 HABP4Q5JVS0 413 aaKnown RBP19.25■□□□□ 0.67
SPG21-211ENST00000560564 SAMD1Q6SPF0 538 aaPredicted RBP19.25■□□□□ 0.67
SPG21-211ENST00000560564 LRRC47Q8N1G4 583 aaKnown RBP19.25■□□□□ 0.67
SPG21-211ENST00000560564 GMCL1P1Q8NEA9 526 aa19.25■□□□□ 0.67
SPG21-211ENST00000560564 LAMA4Q16363 1823 aa19.24■□□□□ 0.67
SPG21-211ENST00000560564 FGAP02671 866 aa19.24■□□□□ 0.67
SPG21-211ENST00000560564 COL6A1P12109 1028 aa19.24■□□□□ 0.67
SPG21-211ENST00000560564 STAT3P40763 770 aa19.24■□□□□ 0.67
SPG21-211ENST00000560564 DPP9Q86TI2 863 aa19.24■□□□□ 0.67
SPG21-211ENST00000560564 NBPF3Q9H094 633 aa19.24■□□□□ 0.67
SPG21-211ENST00000560564 IL17RBQ9NRM6 502 aa19.24■□□□□ 0.67
SPG21-211ENST00000560564 COLQQ9Y215 455 aaPredicted RBP19.24■□□□□ 0.67
SPG21-211ENST00000560564 PFASO15067 1338 aa19.24■□□□□ 0.67
SPG21-211ENST00000560564 ORC4O43929 436 aa19.23■□□□□ 0.67
SPG21-211ENST00000560564 HSPD1P10809 573 aaKnown RBP19.23■□□□□ 0.67
SPG21-211ENST00000560564 NOVP48745 357 aa19.23■□□□□ 0.67
SPG21-211ENST00000560564 PRPF38AQ8NAV1 312 aaKnown RBP19.23■□□□□ 0.67
SPG21-211ENST00000560564 MAML3Q96JK9 1138 aa19.23■□□□□ 0.67
SPG21-211ENST00000560564 PRO3102Q9H379 93 aa19.23■□□□□ 0.67
SPG21-211ENST00000560564 CCDC171Q6TFL3 1326 aa19.23■□□□□ 0.67
SPG21-211ENST00000560564 TRIM6-TRIM34B2RNG4 842 aa19.22■□□□□ 0.67
SPG21-211ENST00000560564 ATP2A1O14983 1001 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms