RNA–Protein interactions for RNA: ENST00000560369.5

LRRC49-223, Transcript of leucine rich repeat containing 49, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene LRRC49, Length 2,586 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC49-223ENST00000560369 SNED1Q8TER0 1413 aa6.58□□□□□ -1.36
LRRC49-223ENST00000560369 DDAH1O94760 285 aa6.58□□□□□ -1.36
LRRC49-223ENST00000560369 KIF20AO95235 890 aa6.58□□□□□ -1.36
LRRC49-223ENST00000560369 BTDP43251 543 aa6.58□□□□□ -1.36
LRRC49-223ENST00000560369 CUL4BQ13620 913 aa6.58□□□□□ -1.36
LRRC49-223ENST00000560369 PFKFB3Q16875 520 aaPredicted RBP6.58□□□□□ -1.36
LRRC49-223ENST00000560369 SHROOM1Q2M3G4 852 aaPredicted RBP6.58□□□□□ -1.36
LRRC49-223ENST00000560369 WWC2Q6AWC2 1192 aa6.58□□□□□ -1.36
LRRC49-223ENST00000560369 TMEM139Q8IV31 216 aa6.58□□□□□ -1.36
LRRC49-223ENST00000560369 C4orf32Q8N8J7 132 aa6.58□□□□□ -1.36
LRRC49-223ENST00000560369 CCDC112Q8NEF3 446 aa6.58□□□□□ -1.36
LRRC49-223ENST00000560369 CTCFLQ8NI51 663 aaPredicted RBP6.58□□□□□ -1.36
LRRC49-223ENST00000560369 SMARCE1Q969G3 411 aa6.58□□□□□ -1.36
LRRC49-223ENST00000560369 PPP1R13BQ96KQ4 1090 aa6.58□□□□□ -1.36
LRRC49-223ENST00000560369 TMEM47Q9BQJ4 181 aa6.58□□□□□ -1.36
LRRC49-223ENST00000560369 MTA3Q9BTC8 594 aa6.58□□□□□ -1.36
LRRC49-223ENST00000560369 KCNQ5Q9NR82 932 aa6.58□□□□□ -1.36
LRRC49-223ENST00000560369 OGFRQ9NZT2 677 aa6.58□□□□□ -1.36
LRRC49-223ENST00000560369 CGNQ9P2M7 1197 aaKnown RBP6.58□□□□□ -1.36
LRRC49-223ENST00000560369 ARPP21Q9UBL0 812 aaPredicted RBP6.58□□□□□ -1.36
LRRC49-223ENST00000560369 STX8Q9UNK0 236 aa6.58□□□□□ -1.36
LRRC49-223ENST00000560369 LTBP1Q14766 1721 aa6.57□□□□□ -1.36
LRRC49-223ENST00000560369 MYH4Q9Y623 1939 aa6.57□□□□□ -1.36
LRRC49-223ENST00000560369 ZNF18P17022 549 aa6.57□□□□□ -1.36
LRRC49-223ENST00000560369 EIF6P56537 245 aaKnown RBP6.57□□□□□ -1.36
LRRC49-223ENST00000560369 MTF1Q14872 753 aa6.57□□□□□ -1.36
LRRC49-223ENST00000560369 NT5DC1Q5TFE4 455 aa6.57□□□□□ -1.36
LRRC49-223ENST00000560369 MEX3CQ5U5Q3 659 aaKnown RBP6.57□□□□□ -1.36
LRRC49-223ENST00000560369 USP17L2Q6R6M4 530 aa6.57□□□□□ -1.36
LRRC49-223ENST00000560369 APTXQ7Z2E3 356 aaKnown RBP6.57□□□□□ -1.36
LRRC49-223ENST00000560369 SH3RF1Q7Z6J0 888 aa6.57□□□□□ -1.36
LRRC49-223ENST00000560369 VSTM4Q8IW00 320 aa6.57□□□□□ -1.36
LRRC49-223ENST00000560369 RGS22Q8NE09 1264 aa6.57□□□□□ -1.36
LRRC49-223ENST00000560369 MKNK2Q9HBH9 465 aa6.57□□□□□ -1.36
LRRC49-223ENST00000560369 VAT1LQ9HCJ6 419 aa6.57□□□□□ -1.36
LRRC49-223ENST00000560369 MYH7BA7E2Y1 1941 aa6.57□□□□□ -1.36
LRRC49-223ENST00000560369 SCN9AQ15858 1988 aa6.57□□□□□ -1.36
LRRC49-223ENST00000560369 RCAN1P53805 252 aa6.57□□□□□ -1.36
LRRC49-223ENST00000560369 RHBDL3P58872 404 aa6.57□□□□□ -1.36
LRRC49-223ENST00000560369 ATP2C1P98194 919 aaPredicted RBP6.57□□□□□ -1.36
LRRC49-223ENST00000560369 KARSQ15046 597 aaKnown RBP6.57□□□□□ -1.36
LRRC49-223ENST00000560369 E2F4Q16254 413 aa6.57□□□□□ -1.36
LRRC49-223ENST00000560369 INF2Q27J81 1249 aa6.57□□□□□ -1.36
LRRC49-223ENST00000560369 SYT10Q6XYQ8 523 aa6.57□□□□□ -1.36
LRRC49-223ENST00000560369 ZNF579Q8NAF0 562 aaKnown RBP6.57□□□□□ -1.36
LRRC49-223ENST00000560369 SPATA20Q8TB22 786 aa6.57□□□□□ -1.36
LRRC49-223ENST00000560369 TBC1D16Q8TBP0 767 aa6.57□□□□□ -1.36
LRRC49-223ENST00000560369 RPGRQ92834 1020 aaKnown RBP6.57□□□□□ -1.36
LRRC49-223ENST00000560369 UIMC1Q96RL1 719 aa6.57□□□□□ -1.36
LRRC49-223ENST00000560369 UBA5Q9GZZ9 404 aa6.57□□□□□ -1.36
LRRC49-223ENST00000560369 KAT14Q9H8E8 782 aa6.57□□□□□ -1.36
LRRC49-223ENST00000560369 ST7Q9NRC1 585 aa6.57□□□□□ -1.36
LRRC49-223ENST00000560369 RBM28Q9NW13 759 aaKnown RBP6.57□□□□□ -1.36
LRRC49-223ENST00000560369 ZNF215Q9UL58 517 aaPredicted RBP6.57□□□□□ -1.36
LRRC49-223ENST00000560369 COL11A2P13942 1736 aaPredicted RBP6.56□□□□□ -1.36
LRRC49-223ENST00000560369 PDS5AQ29RF7 1337 aaKnown RBP6.56□□□□□ -1.36
LRRC49-223ENST00000560369 PPP1R3GB7ZBB8 358 aa6.56□□□□□ -1.36
LRRC49-223ENST00000560369 RNF225M0QZC1 329 aaPredicted RBP6.56□□□□□ -1.36
LRRC49-223ENST00000560369 M0R2N6 131 aa6.56□□□□□ -1.36
LRRC49-223ENST00000560369 NKRFO15226 690 aaKnown RBP eCLIP6.56□□□□□ -1.36
LRRC49-223ENST00000560369 TSPY3P0CV98 308 aa6.56□□□□□ -1.36
LRRC49-223ENST00000560369 TSPY8P0CW00 308 aa6.56□□□□□ -1.36
LRRC49-223ENST00000560369 SFPQP23246 707 aaKnown RBP eCLIP6.56□□□□□ -1.36
LRRC49-223ENST00000560369 CDK8P49336 464 aa6.56□□□□□ -1.36
LRRC49-223ENST00000560369 GTF2IP78347 998 aa6.56□□□□□ -1.36
LRRC49-223ENST00000560369 PICALMQ13492 652 aa6.56□□□□□ -1.36
LRRC49-223ENST00000560369 PTPN14Q15678 1187 aa6.56□□□□□ -1.36
LRRC49-223ENST00000560369 DOK7Q18PE1 504 aa6.56□□□□□ -1.36
LRRC49-223ENST00000560369 KMT5BQ4FZB7 885 aa6.56□□□□□ -1.36
LRRC49-223ENST00000560369 PDXDC2PQ6P474 469 aa6.56□□□□□ -1.36
LRRC49-223ENST00000560369 HEATR3Q7Z4Q2 680 aa6.56□□□□□ -1.36
LRRC49-223ENST00000560369 HOMER1Q86YM7 354 aa6.56□□□□□ -1.36
LRRC49-223ENST00000560369 FAM177A1Q8N128 213 aaPredicted RBP6.56□□□□□ -1.36
LRRC49-223ENST00000560369 CERS5Q8N5B7 392 aa6.56□□□□□ -1.36
LRRC49-223ENST00000560369 EEF2KMTQ96G04 330 aa6.56□□□□□ -1.36
LRRC49-223ENST00000560369 FEZ1Q99689 392 aa6.56□□□□□ -1.36
LRRC49-223ENST00000560369 DDX4Q9NQI0 724 aaKnown RBP6.56□□□□□ -1.36
LRRC49-223ENST00000560369 DDX41Q9UJV9 622 aaKnown RBP6.56□□□□□ -1.36
LRRC49-223ENST00000560369 PCDHA6Q9UN73 950 aa6.56□□□□□ -1.36
LRRC49-223ENST00000560369 LEMD3Q9Y2U8 911 aa6.56□□□□□ -1.36
LRRC49-223ENST00000560369 PCDHA8Q9Y5H6 950 aa6.56□□□□□ -1.36
LRRC49-223ENST00000560369 FLT1P17948 1338 aa6.56□□□□□ -1.36
LRRC49-223ENST00000560369 FRMPD2Q68DX3 1309 aaPredicted RBP6.56□□□□□ -1.36
LRRC49-223ENST00000560369 C6orf229H3BNL8 230 aa6.56□□□□□ -1.36
LRRC49-223ENST00000560369 POLRMTO00411 1230 aaKnown RBP6.56□□□□□ -1.36
LRRC49-223ENST00000560369 SLFN14P0C7P3 912 aa6.56□□□□□ -1.36
LRRC49-223ENST00000560369 CALM1P0DP23 149 aa6.56□□□□□ -1.36
LRRC49-223ENST00000560369 CALM2P0DP24 149 aa6.56□□□□□ -1.36
LRRC49-223ENST00000560369 CALM3P0DP25 149 aa6.56□□□□□ -1.36
LRRC49-223ENST00000560369 SCNN1DP51172 638 aa6.56□□□□□ -1.36
LRRC49-223ENST00000560369 GRM4Q14833 912 aa6.56□□□□□ -1.36
LRRC49-223ENST00000560369 CRY2Q49AN0 593 aa6.56□□□□□ -1.36
LRRC49-223ENST00000560369 MFSD14BQ5SR56 506 aa6.56□□□□□ -1.36
LRRC49-223ENST00000560369 TOGARAM2Q6ZUX3 1019 aa6.56□□□□□ -1.36
LRRC49-223ENST00000560369 TEX11Q8IYF3 940 aa6.56□□□□□ -1.36
LRRC49-223ENST00000560369 BLIDQ8IZY5 108 aa6.56□□□□□ -1.36
LRRC49-223ENST00000560369 TC2NQ8N9U0 490 aa6.56□□□□□ -1.36
LRRC49-223ENST00000560369 KIF18AQ8NI77 898 aa6.56□□□□□ -1.36
LRRC49-223ENST00000560369 WDR66Q8TBY9 1149 aa6.56□□□□□ -1.36
LRRC49-223ENST00000560369 CPLX3Q8WVH0 158 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms