RNA–Protein interactions for RNA: ENST00000560013.5

TM2D3-209, Transcript of TM2 domain containing 3, humanhuman

TSL 2

Gene TM2D3, Length 1,868 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM2D3-209ENST00000560013 NPY5RQ15761 445 aa27.06■■□□□ 1.92
TM2D3-209ENST00000560013 RILPL1Q5EBL4 403 aa27.06■■□□□ 1.92
TM2D3-209ENST00000560013 TMEM39BQ9GZU3 492 aa27.06■■□□□ 1.92
TM2D3-209ENST00000560013 PCDHA7Q9UN72 937 aa27.06■■□□□ 1.92
TM2D3-209ENST00000560013 TNNI2P48788 182 aa27.06■■□□□ 1.92
TM2D3-209ENST00000560013 SLC39A14Q15043 492 aa27.06■■□□□ 1.92
TM2D3-209ENST00000560013 CPVLQ9H3G5 476 aa27.06■■□□□ 1.92
TM2D3-209ENST00000560013 CABP5Q9NP86 173 aa27.06■■□□□ 1.92
TM2D3-209ENST00000560013 SBF1O95248 1867 aa27.06■■□□□ 1.92
TM2D3-209ENST00000560013 LETM1O95202 739 aaPredicted RBP27.05■■□□□ 1.92
TM2D3-209ENST00000560013 EGFRP00533 1210 aa27.05■■□□□ 1.92
TM2D3-209ENST00000560013 LMNB1P20700 586 aa27.05■■□□□ 1.92
TM2D3-209ENST00000560013 FRMPD2Q68DX3 1309 aaPredicted RBP27.05■■□□□ 1.92
TM2D3-209ENST00000560013 ADALQ6DHV7 355 aa27.05■■□□□ 1.92
TM2D3-209ENST00000560013 ZNF541Q9H0D2 1346 aa27.05■■□□□ 1.92
TM2D3-209ENST00000560013 RIOX1Q9H6W3 641 aa27.05■■□□□ 1.92
TM2D3-209ENST00000560013 TBC1D12O60347 775 aa27.04■■□□□ 1.92
TM2D3-209ENST00000560013 ICA1Q05084 483 aa27.04■■□□□ 1.92
TM2D3-209ENST00000560013 ZNF543Q08ER8 600 aa27.04■■□□□ 1.92
TM2D3-209ENST00000560013 RRP36Q96EU6 259 aaKnown RBP27.04■■□□□ 1.92
TM2D3-209ENST00000560013 GH2P01242 217 aa27.04■■□□□ 1.92
TM2D3-209ENST00000560013 CALML3P27482 149 aa27.04■■□□□ 1.92
TM2D3-209ENST00000560013 TOB1P50616 345 aaPredicted RBP27.04■■□□□ 1.92
TM2D3-209ENST00000560013 RRP1BQ14684 758 aaKnown RBP27.04■■□□□ 1.92
TM2D3-209ENST00000560013 GPATCH4Q5T3I0 446 aaKnown RBP27.04■■□□□ 1.92
TM2D3-209ENST00000560013 LRSAM1Q6UWE0 723 aa27.04■■□□□ 1.92
TM2D3-209ENST00000560013 SIAH1Q8IUQ4 282 aa27.04■■□□□ 1.92
TM2D3-209ENST00000560013 GPKOWQ92917 476 aaPredicted RBP eCLIP27.04■■□□□ 1.92
TM2D3-209ENST00000560013 UBA5Q9GZZ9 404 aa27.04■■□□□ 1.92
TM2D3-209ENST00000560013 PGAP2Q9UHJ9 254 aa27.04■■□□□ 1.92
TM2D3-209ENST00000560013 PTPAQ15257 358 aa27.03■■□□□ 1.92
TM2D3-209ENST00000560013 L1TD1Q5T7N2 865 aaKnown RBP27.03■■□□□ 1.92
TM2D3-209ENST00000560013 SAMD7Q7Z3H4 446 aa27.03■■□□□ 1.92
TM2D3-209ENST00000560013 CCAR1Q8IX12 1150 aaKnown RBP27.03■■□□□ 1.92
TM2D3-209ENST00000560013 FAM177A1Q8N128 213 aaPredicted RBP27.03■■□□□ 1.92
TM2D3-209ENST00000560013 BARHL2Q9NY43 387 aa27.03■■□□□ 1.92
TM2D3-209ENST00000560013 JAG1P78504 1218 aa27.02■■□□□ 1.92
TM2D3-209ENST00000560013 TNFAIP1Q13829 316 aa27.02■■□□□ 1.92
TM2D3-209ENST00000560013 WWC2Q6AWC2 1192 aa27.02■■□□□ 1.92
TM2D3-209ENST00000560013 CCDC148Q8NFR7 591 aa27.02■■□□□ 1.92
TM2D3-209ENST00000560013 TNFRSF25Q93038 417 aa27.02■■□□□ 1.92
TM2D3-209ENST00000560013 SYT17Q9BSW7 474 aa27.02■■□□□ 1.92
TM2D3-209ENST00000560013 DACT1Q9NYF0 836 aa27.02■■□□□ 1.92
TM2D3-209ENST00000560013 SEC63Q9UGP8 760 aaKnown RBP27.02■■□□□ 1.92
TM2D3-209ENST00000560013 PPP6R2O75170 966 aa27.02■■□□□ 1.92
TM2D3-209ENST00000560013 HEATR3Q7Z4Q2 680 aa27.02■■□□□ 1.92
TM2D3-209ENST00000560013 CDAN1Q8IWY9 1227 aa27.02■■□□□ 1.92
TM2D3-209ENST00000560013 VAT1LQ9HCJ6 419 aa27.02■■□□□ 1.92
TM2D3-209ENST00000560013 GPCPD1Q9NPB8 672 aa27.02■■□□□ 1.92
TM2D3-209ENST00000560013 A0A1W2PQ27 194 aa27.01■■□□□ 1.91
TM2D3-209ENST00000560013 A0A1W2PQ64 194 aa27.01■■□□□ 1.91
TM2D3-209ENST00000560013 A0A1W2PQD8 194 aa27.01■■□□□ 1.91
TM2D3-209ENST00000560013 RASA3Q14644 834 aa27.01■■□□□ 1.91
TM2D3-209ENST00000560013 TBC1D10BQ4KMP7 808 aaPredicted RBP27.01■■□□□ 1.91
TM2D3-209ENST00000560013 HOMER1Q86YM7 354 aa27.01■■□□□ 1.91
TM2D3-209ENST00000560013 JMYQ8N9B5 988 aa27.01■■□□□ 1.91
TM2D3-209ENST00000560013 EIF4ENIF1Q9NRA8 985 aaKnown RBP27.01■■□□□ 1.91
TM2D3-209ENST00000560013 DDX19AQ9NUU7 478 aaKnown RBP27.01■■□□□ 1.91
TM2D3-209ENST00000560013 STXBP3O00186 592 aa27■■□□□ 1.91
TM2D3-209ENST00000560013 NR1I2O75469 434 aa27■■□□□ 1.91
TM2D3-209ENST00000560013 TYW1BQ6NUM6 668 aa27■■□□□ 1.91
TM2D3-209ENST00000560013 PIGSQ96S52 555 aa27■■□□□ 1.91
TM2D3-209ENST00000560013 MAP3K10Q02779 954 aa27■■□□□ 1.91
TM2D3-209ENST00000560013 CCDC96Q2M329 555 aa27■■□□□ 1.91
TM2D3-209ENST00000560013 KIF4BQ2VIQ3 1234 aa27■■□□□ 1.91
TM2D3-209ENST00000560013 GALNT17Q6IS24 598 aa27■■□□□ 1.91
TM2D3-209ENST00000560013 BLIDQ8IZY5 108 aa27■■□□□ 1.91
TM2D3-209ENST00000560013 DCAF4Q8WV16 495 aa27■■□□□ 1.91
TM2D3-209ENST00000560013 PCDHA4Q9UN74 947 aa27■■□□□ 1.91
TM2D3-209ENST00000560013 H7C1D1 291 aa26.99■■□□□ 1.91
TM2D3-209ENST00000560013 MRE11P49959 708 aa26.99■■□□□ 1.91
TM2D3-209ENST00000560013 EARS2Q5JPH6 523 aaKnown RBP26.99■■□□□ 1.91
TM2D3-209ENST00000560013 MIGA2Q7L4E1 593 aa26.99■■□□□ 1.91
TM2D3-209ENST00000560013 NUP62CLQ9H1M0 184 aa26.99■■□□□ 1.91
TM2D3-209ENST00000560013 MARCKSP29966 332 aaPredicted RBP26.98■■□□□ 1.91
TM2D3-209ENST00000560013 SLFN13Q68D06 897 aa26.98■■□□□ 1.91
TM2D3-209ENST00000560013 CCDC73Q6ZRK6 1079 aa26.98■■□□□ 1.91
TM2D3-209ENST00000560013 GPC2Q8N158 579 aa26.98■■□□□ 1.91
TM2D3-209ENST00000560013 CCDC12Q8WUD4 166 aaPredicted RBP26.98■■□□□ 1.91
TM2D3-209ENST00000560013 GRPEL1Q9HAV7 217 aa26.98■■□□□ 1.91
TM2D3-209ENST00000560013 FAM205CA6NFA0 338 aa26.98■■□□□ 1.91
TM2D3-209ENST00000560013 SLC1A4P43007 532 aa26.98■■□□□ 1.91
TM2D3-209ENST00000560013 AXDND1Q5T1B0 1012 aaPredicted RBP26.98■■□□□ 1.91
TM2D3-209ENST00000560013 KCTD1Q719H9 257 aa26.98■■□□□ 1.91
TM2D3-209ENST00000560013 FSIP1Q8NA03 581 aa26.98■■□□□ 1.91
TM2D3-209ENST00000560013 DAGLBQ8NCG7 672 aa26.98■■□□□ 1.91
TM2D3-209ENST00000560013 GMCL1P1Q8NEA9 526 aa26.98■■□□□ 1.91
TM2D3-209ENST00000560013 MRPS27Q92552 414 aaKnown RBP26.98■■□□□ 1.91
TM2D3-209ENST00000560013 GOLPH3LQ9H4A5 285 aa26.98■■□□□ 1.91
TM2D3-209ENST00000560013 SYNPO2Q9UMS6 1093 aa26.98■■□□□ 1.91
TM2D3-209ENST00000560013 NOL7Q9UMY1 257 aaKnown RBP26.98■■□□□ 1.91
TM2D3-209ENST00000560013 PCDHB6Q9Y5E3 794 aa26.98■■□□□ 1.91
TM2D3-209ENST00000560013 hCG_1984214I3L0E3 225 aa26.97■■□□□ 1.91
TM2D3-209ENST00000560013 RAD21O60216 631 aa26.97■■□□□ 1.91
TM2D3-209ENST00000560013 TTBK2Q6IQ55 1244 aa26.97■■□□□ 1.91
TM2D3-209ENST00000560013 ADGRF4Q8IZF3 695 aa26.97■■□□□ 1.91
TM2D3-209ENST00000560013 ZNF713Q8N859 430 aaPredicted RBP26.97■■□□□ 1.91
TM2D3-209ENST00000560013 HACL1Q9UJ83 578 aa26.97■■□□□ 1.91
TM2D3-209ENST00000560013 CEP131Q9UPN4 1083 aa26.97■■□□□ 1.91
TM2D3-209ENST00000560013 SCAF8Q9UPN6 1271 aaKnown RBP26.97■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms