RNA–Protein interactions for RNA: ENST00000559941.1

CHRNA3-207, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 4

Gene CHRNA3, Length 592 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-207ENST00000559941 CCND3P30281 292 aaPredicted RBP24.38■■□□□ 1.49
CHRNA3-207ENST00000559941 PLS1Q14651 629 aa24.38■■□□□ 1.49
CHRNA3-207ENST00000559941 HABP4Q5JVS0 413 aaKnown RBP24.38■■□□□ 1.49
CHRNA3-207ENST00000559941 FAM83BQ5T0W9 1011 aa24.38■■□□□ 1.49
CHRNA3-207ENST00000559941 MFSD14CQ5VZR4 134 aa24.38■■□□□ 1.49
CHRNA3-207ENST00000559941 SAMD1Q6SPF0 538 aaPredicted RBP24.38■■□□□ 1.49
CHRNA3-207ENST00000559941 DIS3LQ8TF46 1054 aaKnown RBP24.38■■□□□ 1.49
CHRNA3-207ENST00000559941 LNPKQ9C0E8 428 aa24.38■■□□□ 1.49
CHRNA3-207ENST00000559941 FRMPD3Q5JV73 1810 aa24.38■■□□□ 1.49
CHRNA3-207ENST00000559941 F5H6K3 240 aa24.37■■□□□ 1.49
CHRNA3-207ENST00000559941 SLC3A2P08195 630 aaKnown RBP24.37■■□□□ 1.49
CHRNA3-207ENST00000559941 PDE4BQ07343 736 aa24.37■■□□□ 1.49
CHRNA3-207ENST00000559941 KLRC3Q07444 240 aa24.37■■□□□ 1.49
CHRNA3-207ENST00000559941 PPARAQ07869 468 aa24.37■■□□□ 1.49
CHRNA3-207ENST00000559941 TMEM132BQ14DG7 1078 aa24.37■■□□□ 1.49
CHRNA3-207ENST00000559941 CCDC129Q6ZRS4 1044 aa24.37■■□□□ 1.49
CHRNA3-207ENST00000559941 TICAM2Q86XR7 235 aa24.37■■□□□ 1.49
CHRNA3-207ENST00000559941 EXOC6Q8TAG9 804 aa24.37■■□□□ 1.49
CHRNA3-207ENST00000559941 MKL1Q969V6 931 aa24.37■■□□□ 1.49
CHRNA3-207ENST00000559941 PPP1R9AQ9ULJ8 1098 aa24.37■■□□□ 1.49
CHRNA3-207ENST00000559941 FOXP2O15409 715 aa24.36■■□□□ 1.49
CHRNA3-207ENST00000559941 SLC25A27O95847 323 aa24.36■■□□□ 1.49
CHRNA3-207ENST00000559941 IGHA2P01877 340 aa24.36■■□□□ 1.49
CHRNA3-207ENST00000559941 ADORA2AP29274 412 aa24.36■■□□□ 1.49
CHRNA3-207ENST00000559941 MNX1P50219 401 aaPredicted RBP24.36■■□□□ 1.49
CHRNA3-207ENST00000559941 LHX8Q68G74 356 aa24.36■■□□□ 1.49
CHRNA3-207ENST00000559941 DPP9Q86TI2 863 aa24.36■■□□□ 1.49
CHRNA3-207ENST00000559941 NCAPG2Q86XI2 1143 aa24.36■■□□□ 1.49
CHRNA3-207ENST00000559941 ABRAQ8N0Z2 381 aa24.36■■□□□ 1.49
CHRNA3-207ENST00000559941 NEDD1Q8NHV4 660 aa24.36■■□□□ 1.49
CHRNA3-207ENST00000559941 HELLSQ9NRZ9 838 aa24.36■■□□□ 1.49
CHRNA3-207ENST00000559941 MTMR4Q9NYA4 1195 aa24.36■■□□□ 1.49
CHRNA3-207ENST00000559941 CLIP2Q9UDT6 1046 aa24.36■■□□□ 1.49
CHRNA3-207ENST00000559941 NR2E3Q9Y5X4 410 aa24.36■■□□□ 1.49
CHRNA3-207ENST00000559941 PLIN4Q96Q06 1357 aa24.35■■□□□ 1.49
CHRNA3-207ENST00000559941 VWA5AO00534 786 aa24.35■■□□□ 1.49
CHRNA3-207ENST00000559941 IGHDP01880 384 aa24.35■■□□□ 1.49
CHRNA3-207ENST00000559941 CEP95Q96GE4 821 aa24.35■■□□□ 1.49
CHRNA3-207ENST00000559941 NBPF3Q9H094 633 aa24.35■■□□□ 1.49
CHRNA3-207ENST00000559941 SYNPO2Q9UMS6 1093 aa24.35■■□□□ 1.49
CHRNA3-207ENST00000559941 NDUFB10O96000 172 aa24.34■■□□□ 1.49
CHRNA3-207ENST00000559941 B4GALNT3Q6L9W6 998 aa24.34■■□□□ 1.49
CHRNA3-207ENST00000559941 RIOX2Q8IUF8 465 aa24.34■■□□□ 1.49
CHRNA3-207ENST00000559941 REPS2Q8NFH8 660 aa24.34■■□□□ 1.49
CHRNA3-207ENST00000559941 NUP88Q99567 741 aaPredicted RBP24.34■■□□□ 1.49
CHRNA3-207ENST00000559941 COLQQ9Y215 455 aaPredicted RBP24.34■■□□□ 1.49
CHRNA3-207ENST00000559941 COBLO75128 1261 aa24.33■■□□□ 1.49
CHRNA3-207ENST00000559941 TTLL1O95922 423 aa24.33■■□□□ 1.49
CHRNA3-207ENST00000559941 TSPY3P0CV98 308 aa24.33■■□□□ 1.49
CHRNA3-207ENST00000559941 TSPY8P0CW00 308 aa24.33■■□□□ 1.49
CHRNA3-207ENST00000559941 TFAP4Q01664 338 aa24.33■■□□□ 1.49
CHRNA3-207ENST00000559941 OLFML2BQ68BL8 750 aa24.33■■□□□ 1.49
CHRNA3-207ENST00000559941 SLF1Q9BQI6 1058 aa24.33■■□□□ 1.49
CHRNA3-207ENST00000559941 SLC5A4Q9NY91 659 aa24.33■■□□□ 1.49
CHRNA3-207ENST00000559941 ZNF214Q9UL59 606 aaPredicted RBP24.33■■□□□ 1.49
CHRNA3-207ENST00000559941 PLXNA1Q9UIW2 1896 aa24.32■■□□□ 1.48
CHRNA3-207ENST00000559941 EVI5O60447 810 aa24.32■■□□□ 1.48
CHRNA3-207ENST00000559941 FCER1AP12319 257 aa24.32■■□□□ 1.48
CHRNA3-207ENST00000559941 CYP2C19P33261 490 aa24.32■■□□□ 1.48
CHRNA3-207ENST00000559941 STAT3P40763 770 aa24.32■■□□□ 1.48
CHRNA3-207ENST00000559941 FAM47AQ5JRC9 791 aa24.32■■□□□ 1.48
CHRNA3-207ENST00000559941 VPS53Q5VIR6 699 aa24.32■■□□□ 1.48
CHRNA3-207ENST00000559941 CHD1LQ86WJ1 897 aa24.32■■□□□ 1.48
CHRNA3-207ENST00000559941 C11orf49Q9H6J7 331 aa24.32■■□□□ 1.48
CHRNA3-207ENST00000559941 DDX52Q9Y2R4 599 aaKnown RBP eCLIP24.32■■□□□ 1.48
CHRNA3-207ENST00000559941 TRIOBPQ9H2D6 2365 aa24.32■■□□□ 1.48
CHRNA3-207ENST00000559941 NUCB1Q02818 461 aa24.31■■□□□ 1.48
CHRNA3-207ENST00000559941 ALX1Q15699 326 aa24.31■■□□□ 1.48
CHRNA3-207ENST00000559941 MCMDC2Q4G0Z9 681 aa24.31■■□□□ 1.48
CHRNA3-207ENST00000559941 FAM227BQ96M60 508 aa24.31■■□□□ 1.48
CHRNA3-207ENST00000559941 OSBPL3Q9H4L5 887 aa24.31■■□□□ 1.48
CHRNA3-207ENST00000559941 ANAPC4Q9UJX5 808 aa24.31■■□□□ 1.48
CHRNA3-207ENST00000559941 A0A0D9SFI3 127 aa24.3■■□□□ 1.48
CHRNA3-207ENST00000559941 MSCO60682 206 aa24.3■■□□□ 1.48
CHRNA3-207ENST00000559941 COPB2P35606 906 aa24.3■■□□□ 1.48
CHRNA3-207ENST00000559941 CTDSPL2Q05D32 466 aa24.3■■□□□ 1.48
CHRNA3-207ENST00000559941 PLEKHM2Q8IWE5 1019 aa24.3■■□□□ 1.48
CHRNA3-207ENST00000559941 PRPF38AQ8NAV1 312 aaKnown RBP24.3■■□□□ 1.48
CHRNA3-207ENST00000559941 GMCL1P1Q8NEA9 526 aa24.3■■□□□ 1.48
CHRNA3-207ENST00000559941 TRIM6-TRIM34B2RNG4 842 aa24.29■■□□□ 1.48
CHRNA3-207ENST00000559941 CYBAP13498 195 aa24.29■■□□□ 1.48
CHRNA3-207ENST00000559941 CHRDL2Q6WN34 429 aa24.29■■□□□ 1.48
CHRNA3-207ENST00000559941 LRRC47Q8N1G4 583 aaKnown RBP24.29■■□□□ 1.48
CHRNA3-207ENST00000559941 TRPV1Q8NER1 839 aa24.29■■□□□ 1.48
CHRNA3-207ENST00000559941 MMP19Q99542 508 aa24.29■■□□□ 1.48
CHRNA3-207ENST00000559941 DDX20Q9UHI6 824 aaKnown RBP24.29■■□□□ 1.48
CHRNA3-207ENST00000559941 SUPT16HQ9Y5B9 1047 aaKnown RBP24.29■■□□□ 1.48
CHRNA3-207ENST00000559941 COL6A1P12109 1028 aa24.28■■□□□ 1.48
CHRNA3-207ENST00000559941 CNGA1P29973 690 aa24.28■■□□□ 1.48
CHRNA3-207ENST00000559941 NMIQ13287 307 aaPredicted RBP24.28■■□□□ 1.48
CHRNA3-207ENST00000559941 RILPL2Q969X0 211 aa24.28■■□□□ 1.48
CHRNA3-207ENST00000559941 MAML3Q96JK9 1138 aa24.28■■□□□ 1.48
CHRNA3-207ENST00000559941 INCENPQ9NQS7 918 aa24.28■■□□□ 1.48
CHRNA3-207ENST00000559941 FEM1BQ9UK73 627 aa24.28■■□□□ 1.48
CHRNA3-207ENST00000559941 TACC3Q9Y6A5 838 aa24.28■■□□□ 1.48
CHRNA3-207ENST00000559941 PPP4R3BQ5MIZ7 849 aa24.27■■□□□ 1.48
CHRNA3-207ENST00000559941 SLFN13Q68D06 897 aa24.27■■□□□ 1.48
CHRNA3-207ENST00000559941 TEX13BQ9BXU2 312 aa24.27■■□□□ 1.48
CHRNA3-207ENST00000559941 PFASO15067 1338 aa24.27■■□□□ 1.48
CHRNA3-207ENST00000559941 SMCHD1A6NHR9 2005 aa24.27■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms